Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0049s0105 Marchantia polymorpha HOM05D000384 ORTHO05D006260 8.7e-73 276.9 147 100.0
SEGI_35673 Sequoiadendron giganteum HOM05D000384 ORTHO05D006260 5.3e-46 188.0 145 69.7
Haze_00893 Corylus avellana HOM05D000384 ORTHO05D006260 7.0e-46 187.6 145 66.2
Cfa015651 Carpinus fangiana HOM05D000384 ORTHO05D006260 2.6e-45 185.7 145 65.5
GSVIVG01017982001 Vitis vinifera HOM05D000384 ORTHO05D006260 4.5e-45 184.9 145 66.9
QL06p002227 Quercus lobata HOM05D000384 ORTHO05D006260 7.7e-45 184.1 145 66.2
Duzib128G1753 Durio zibethinus HOM05D000384 ORTHO05D006260 1.0e-44 183.7 142 67.6
arahy.Tifrunner.gnm1.ann1.JHWM2T Arachis hypogaea HOM05D000384 ORTHO05D006260 1.7e-44 183.0 143 66.4
arahy.Tifrunner.gnm1.ann1.K8JXLT Arachis hypogaea HOM05D000384 ORTHO05D006260 1.7e-44 183.0 143 66.4
arahy.Tifrunner.gnm1.ann1.U3DZXE Arachis hypogaea HOM05D000384 ORTHO05D006260 1.7e-44 183.0 143 66.4
Lalb_Chr19g0132471 Lupinus albus HOM05D000384 ORTHO05D006260 2.2e-44 182.6 145 64.1
CiPaw.02G097700 Carya illinoinensis HOM05D000384 ORTHO05D006260 6.5e-44 181.0 145 64.1
arahy.Tifrunner.gnm1.ann1.T2NEZJ Arachis hypogaea HOM05D000384 ORTHO05D006260 1.4e-43 179.9 143 65.7
FAN07G0857 Fragaria x ananassa HOM05D000384 ORTHO05D006260 1.4e-43 179.9 135 68.9
Prupe.1G014300 Prunus persica HOM05D000384 ORTHO05D006260 1.4e-43 179.9 146 65.8
FAN22G1586 Fragaria x ananassa HOM05D000384 ORTHO05D006260 1.9e-43 179.5 135 68.1
Nn3g18529 Nelumbo nucifera HOM05D000384 ORTHO05D006260 1.9e-43 179.5 135 67.4
TAR636G3061 Trochodendron aralioides HOM05D000384 ORTHO05D006260 1.9e-43 179.5 135 67.4
Aqoxy1G01533 Aquilegia oxysepala HOM05D000384 ORTHO05D006260 4.2e-43 178.3 135 67.4
Aqoxy5G00465 Aquilegia oxysepala HOM05D000384 ORTHO05D006260 4.2e-43 178.3 135 67.4
MD16G1194400 Malus domestica HOM05D000384 ORTHO05D006260 4.2e-43 178.3 146 65.1
Manes.03G178300 Manihot esculenta HOM05D000384 ORTHO05D006260 4.2e-43 178.3 145 64.8
Duzib114G0643 Durio zibethinus HOM05D000384 ORTHO05D006260 5.5e-43 177.9 142 64.8
Sabra08G0117400 Salix brachista HOM05D000384 ORTHO05D006260 5.5e-43 177.9 146 63.0
Os12g0485800 Oryza sativa ssp. japonica HOM05D000384 ORTHO05D006260 7.2e-43 177.6 145 63.4
Ca_14031_v3 Cicer arietinum L. HOM05D000384 ORTHO05D006260 9.4e-43 177.2 140 64.3
RcHm_v2.0_Chr4g0416141 Rosa chinensis HOM05D000384 ORTHO05D006260 9.4e-43 177.2 135 66.7
Actinidia40142 Actinidia chinensis HOM05D000384 ORTHO05D006260 1.2e-42 176.8 145 63.4
Thecc.10G059100 Theobroma cacao HOM05D000384 ORTHO05D006260 1.2e-42 176.8 142 65.5
Dinv44537 Davidia involucrata HOM05D000384 ORTHO05D000468 1.6e-42 176.4 145 64.1
Oeu031225.1 Olea europaea HOM05D000384 ORTHO05D006260 1.6e-42 176.4 145 64.8
Oeu031229.1 Olea europaea HOM05D000384 ORTHO05D006260 1.6e-42 176.4 145 64.8
PGR004G2612 Punica granatum HOM05D000384 ORTHO05D006260 1.6e-42 176.4 147 65.3
SalBow3G1001 Salvia bowleyana HOM05D000384 ORTHO05D006260 1.6e-42 176.4 133 68.4
AagrBONN_evm.TU.Sc2ySwM_344.1360 Anthoceros agrestis HOM05D000384 ORTHO05D006260 2.1e-42 176.0 148 65.5
ClCG05G005160 Citrullus lanatus HOM05D000384 ORTHO05D006260 2.1e-42 176.0 146 65.8
FvH4_4g15650 Fragaria vesca HOM05D000384 ORTHO05D006260 2.1e-42 176.0 135 68.1
FAN12G1863 Fragaria x ananassa HOM05D000384 ORTHO05D006260 2.1e-42 176.0 135 68.1
FAN17G0123 Fragaria x ananassa HOM05D000384 ORTHO05D006260 2.1e-42 176.0 135 67.4
SMO169G0080 Selaginella moellendorffii HOM05D000384 ORTHO05D006260 2.1e-42 176.0 137 69.3
SGA_v2.0_scaffold522G52709 Striga asiatica HOM05D000384 ORTHO05D006260 2.1e-42 176.0 145 64.8
TWI09G1519 Tripterygium wilfordii HOM05D000384 ORTHO05D006260 2.1e-42 176.0 145 64.1
Cpa.g.sc58.101 Carica papaya HOM05D000384 ORTHO05D006260 2.7e-42 175.6 139 65.5
CsaV3_5G038350 Cucumis sativus L. HOM05D000384 ORTHO05D006260 2.7e-42 175.6 146 65.8
RcHm_v2.0_Chr1g0362551 Rosa chinensis HOM05D000384 ORTHO05D006260 2.7e-42 175.6 135 66.7
RcHm_v2.0_Chr4g0387021 Rosa chinensis HOM05D000384 ORTHO05D006260 2.7e-42 175.6 135 66.7
MBI11_g07539_MAGBIO Magnolia biondii HOM05D000384 ORTHO05D006260 3.6e-42 175.3 135 67.4
Sed0018578 Sechium edule HOM05D000384 ORTHO05D006260 3.6e-42 175.3 145 64.1
Cc03_g03830 Coffea canephora HOM05D000384 ORTHO05D006260 4.7e-42 174.9 137 67.9
Potri.008G153900 Populus trichocarpa HOM05D000384 ORTHO05D006260 4.7e-42 174.9 145 62.8
MELO3C022017.2 Cucumis melo HOM05D000384 ORTHO05D006260 6.1e-42 174.5 146 65.1
Psat0s3755g0120 Pisum sativum HOM05D000384 ORTHO05D006260 6.1e-42 174.5 140 62.9
MSTRG.24739 Avicennia marina HOM05D000384 ORTHO05D006260 8.0e-42 174.1 145 63.4
Lj3E734T1 Lonicera japonica HOM05D000384 ORTHO05D006260 8.0e-42 174.1 135 67.4
ECA247G4089 Erigeron canadensis HOM05D000384 ORTHO05D006260 1.0e-41 173.7 145 62.1
Migut.N00188 Erythranthe guttata HOM05D000384 ORTHO05D006260 1.0e-41 173.7 145 62.8
PSO210G4801 Papaver somniferum HOM05D000384 ORTHO05D006260 1.0e-41 173.7 133 67.7
Sopen06g018540 Solanum pennellii HOM05D000384 ORTHO05D006260 1.0e-41 173.7 135 66.7
CAN.G1280.23 Capsicum annuum HOM05D000384 ORTHO05D006260 1.4e-41 173.3 142 64.1
COL.COLO4_10907 Corchorus olitorius HOM05D000384 ORTHO05D006260 1.4e-41 173.3 142 64.1
PSO832G3877 Papaver somniferum HOM05D000384 ORTHO05D006260 1.4e-41 173.3 133 67.7
CiPaw.01G166600 Carya illinoinensis HOM05D000384 ORTHO05D006260 1.8e-41 172.9 145 62.8
Glyma.06G316000 Glycine max HOM05D000384 ORTHO05D006260 1.8e-41 172.9 142 63.4
Glyma.13G124100 Glycine max HOM05D000384 ORTHO05D006260 1.8e-41 172.9 142 63.4
Rhsim04G0201900 Rhododendron simsii HOM05D000384 ORTHO05D006260 1.8e-41 172.9 138 67.4
PGSC0003DMG400016332 Solanum tuberosum HOM05D000384 ORTHO05D006260 1.8e-41 172.9 135 65.9
Eucgr.H03463 Eucalyptus grandis HOM05D000384 ORTHO05D006260 2.3e-41 172.6 137 66.4
Medtr3g007250 Medicago truncatula HOM05D000384 ORTHO05D006260 2.3e-41 172.6 140 62.1
Nitab4.5_0007474g0030 Nicotiana tabacum HOM05D000384 ORTHO05D006260 2.3e-41 172.6 135 64.4
EL10Ac4g08427 Beta vulgaris HOM05D000384 ORTHO05D006260 3.0e-41 172.2 138 63.8
HanXRQChr08g0229211 Helianthus annuus HOM05D000384 ORTHO05D006260 3.0e-41 172.2 145 61.4
Phvul.008G161600 Phaseolus vulgaris HOM05D000384 ORTHO05D006260 3.0e-41 172.2 142 62.7
Sc19g0004110 Simmondsia chinensis HOM05D000384 ORTHO05D006260 3.0e-41 172.2 145 62.8
TPR.G25531 Trifolium pratense HOM05D000384 ORTHO05D006260 3.0e-41 172.2 140 62.1
VMungo0720G1921 Vigna mungo HOM05D000384 ORTHO05D006260 3.0e-41 172.2 142 62.7
Gohir.D10G218900 Gossypium hirsutum HOM05D000384 ORTHO05D006260 3.9e-41 171.8 142 64.8
Gorai.011G245600 Gossypium raimondii HOM05D000384 ORTHO05D006260 3.9e-41 171.8 142 64.8
CSS0003915 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 5.2e-41 171.4 144 63.9
CSS0025710 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 5.2e-41 171.4 144 63.9
CANSAT64G0565 Cannabis sativa HOM05D000384 ORTHO05D006260 5.2e-41 171.4 135 63.7
AUR62019660 Chenopodium quinoa HOM05D000384 ORTHO05D006260 5.2e-41 171.4 145 62.8
Nitab4.5_0007368g0020 Nicotiana tabacum HOM05D000384 ORTHO05D006260 5.2e-41 171.4 135 63.7
Sc13g0004430 Simmondsia chinensis HOM05D000384 ORTHO05D006260 5.2e-41 171.4 145 63.4
Glyma.05G087300 Glycine max HOM05D000384 ORTHO05D006260 6.7e-41 171.0 142 62.7
Gohir.A10G210600 Gossypium hirsutum HOM05D000384 ORTHO05D006260 6.7e-41 171.0 142 64.8
Lsat_1_v5_gn_9_18461 Lactuca sativa HOM05D000384 ORTHO05D006260 6.7e-41 171.0 135 64.4
Atru.chr4.720 Acer truncatum HOM05D000384 ORTHO05D006260 8.8e-41 170.6 145 61.4
CSS0048526 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 8.8e-41 170.6 144 63.2
CAN.G136.5 Capsicum annuum HOM05D000384 ORTHO05D006260 8.8e-41 170.6 135 65.9
Hma1.2p1_0745F.1_g212050 Hydrangea macrophylla HOM05D000384 ORTHO05D006260 8.8e-41 170.6 145 62.1
AUR62013951 Chenopodium quinoa HOM05D000384 ORTHO05D006260 1.1e-40 170.2 138 64.5
Lj3g0015206 Lotus japonicus HOM05D000384 ORTHO05D006260 1.1e-40 170.2 135 63.7
Peaxi162Scf00579g00001 Petunia axillaris HOM05D000384 ORTHO05D006260 1.5e-40 169.9 135 64.4
Zm00001eb114150 Zea mays HOM05D000384 ORTHO05D006260 1.5e-40 169.9 145 60.7
Atru.chr4.2459 Acer truncatum HOM05D000384 ORTHO05D006260 2.0e-40 169.5 140 64.3
TWI53G0398 Tripterygium wilfordii HOM05D000384 ORTHO05D006260 2.0e-40 169.5 133 64.7
Ciclev10006154m.g Citrus clementina HOM05D000384 ORTHO05D006260 2.6e-40 169.1 145 62.1
Os11g0568500 Oryza sativa ssp. japonica HOM05D000384 ORTHO05D006260 2.6e-40 169.1 145 60.0
THA.LOC104803028 Tarenaya hassleriana HOM05D000384 ORTHO05D006260 4.4e-40 168.3 145 62.1
Zm00001eb415970 Zea mays HOM05D000384 ORTHO05D006260 7.4e-40 167.5 145 58.6
DCAR_024164 Daucus carota HOM05D000384 ORTHO05D006260 1.3e-39 166.8 135 65.2
Potri.001G240200 Populus trichocarpa HOM05D000384 ORTHO05D006260 1.3e-39 166.8 135 63.7
DCAR_027219 Daucus carota HOM05D000384 ORTHO05D006260 1.7e-39 166.4 135 64.4
Hund25029 Selenicereus undatus HOM05D000384 ORTHO05D006260 2.2e-39 166.0 145 62.1
THA.LOC104822267 Tarenaya hassleriana HOM05D000384 ORTHO05D006260 4.8e-39 164.9 145 62.1
Sabra16G0144900 Salix brachista HOM05D000384 ORTHO05D006260 1.8e-38 162.9 135 63.0
unitig_699.g19994 Utricularia gibba HOM05D000384 ORTHO05D006260 2.4e-38 162.5 138 63.0
Solyc06g053460.3 Solanum lycopersicum HOM05D000384 ORTHO05D006260 5.3e-38 161.4 121 67.8
Pp3c23_10300 Physcomitrium patens HOM05D000384 ORTHO05D006260 7.0e-38 161.0 141 66.0
Aa31LG8G9040 Aethionema arabicum HOM05D000384 ORTHO05D006260 1.6e-37 159.8 145 60.0
Thhalv10021707m.g Eutrema salsugineum HOM05D000384 ORTHO05D006260 1.6e-37 159.8 132 64.4
Oeu050282.1 Olea europaea HOM05D000384 ORTHO05D006260 2.0e-37 159.5 145 60.7
CARHR098380 Cardamine hirsuta HOM05D000384 ORTHO05D006260 4.5e-37 158.3 132 64.4
BcaC05g28063 Brassica carinata HOM05D000384 ORTHO05D006260 5.9e-37 157.9 132 61.4
C05p40760 Brassica napus HOM05D000384 ORTHO05D006260 5.9e-37 157.9 132 61.4
BolC5t32821H Brassica oleracea HOM05D000384 ORTHO05D006260 5.9e-37 157.9 132 61.4
A05p26280 Brassica napus HOM05D000384 ORTHO05D006260 1.0e-36 157.1 132 61.4
BraA05t21503Z Brassica rapa HOM05D000384 ORTHO05D006260 1.7e-36 156.4 130 61.5
BraA03t13424Z Brassica rapa HOM05D000384 ORTHO05D006260 2.9e-36 155.6 132 60.6
BcaB04g19201 Brassica carinata HOM05D000384 ORTHO05D006260 6.5e-36 154.5 132 62.1
BcaC01g03444 Brassica carinata HOM05D000384 ORTHO05D006260 6.5e-36 154.5 132 61.4
C03p52530 Brassica napus HOM05D000384 ORTHO05D006260 6.5e-36 154.5 132 61.4
CBR_g42063 Chara braunii HOM05D000384 ORTHO05D006260 8.5e-36 154.1 141 59.6
BcaB06g26358 Brassica carinata HOM05D000384 ORTHO05D006260 1.5e-35 153.3 132 61.4
BolC3t17522H Brassica oleracea HOM05D000384 ORTHO05D006260 1.5e-35 153.3 130 61.5
A03p42770 Brassica napus HOM05D000384 ORTHO05D006260 4.2e-35 151.8 133 60.2
AT3G22480 Arabidopsis thaliana HOM05D000384 ORTHO05D006260 9.4e-35 150.6 132 62.1
Carub.0003s2264 Capsella rubella HOM05D000384 ORTHO05D006260 9.4e-35 150.6 132 62.1
HanXRQChr04g0103741 Helianthus annuus HOM05D000384 ORTHO05D006260 1.6e-34 149.8 117 65.0
ATR0083G069 Amborella trichopoda HOM05D000384 ORTHO05D006260 2.7e-34 149.1 135 60.0
TAR365G0396 Trochodendron aralioides HOM05D000384 ORTHO05D006260 2.7e-34 149.1 119 67.2
C05p40680 Brassica napus HOM05D000384 ORTHO05D006260 4.7e-34 148.3 132 60.6
BolC5t32807H Brassica oleracea HOM05D000384 ORTHO05D006260 4.7e-34 148.3 132 60.6
AagrBONN_evm.TU.Sc2ySwM_228.3583 Anthoceros agrestis HOM05D000384 ORTHO05D006260 6.1e-34 147.9 114 67.5
Pp3c24_3120 Physcomitrium patens HOM05D000384 ORTHO05D006260 2.3e-33 146.0 142 59.2
AL3G36790 Arabidopsis lyrata HOM05D000384 ORTHO05D006260 5.2e-33 144.8 132 60.6
Ah.04g163960 Amaranthus hybridus HOM05D000384 ORTHO05D006260 4.1e-30 135.2 145 53.8
Sp3g20250 Schrenkiella parvula HOM05D000384 ORTHO05D006260 1.2e-29 133.7 132 56.1
HPP92_018608 Vanilla planifolia HOM05D000384 ORTHO05D006260 1.8e-25 119.8 133 54.1
MCO05G108 Micromonas commoda HOM05D000384 ORTHO05D006260 4.5e-21 105.1 134 44.0
HPP92_018610 Vanilla planifolia HOM05D000384 ORTHO05D006260 5.0e-20 101.7 90 62.2
Cre07.g342250 Chlamydomonas reinhardtii HOM05D000384 ORTHO05D006260 7.2e-19 97.8 136 41.9
BcaC05g28047 Brassica carinata HOM05D000384 ORTHO05D006260 8.9e-17 90.9 92 56.5
Hma1.2p1_0602F.1_g187390 Hydrangea macrophylla HOM05D000384 ORTHO05D006260 2.0e-16 89.7 105 46.7
PRCOL_00004688 Prasinoderma coloniale HOM05D000384 ORTHO05D006260 9.2e-14 80.9 88 50.0
CDE09G0159 Ceratophyllum demersum HOM05D000384 ORTHO05D006260 6.4e-07 58.2 46 58.7


User provided reference genes

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