Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 1.5e-47 192.6 102 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 2.3e-19 99.0 90 61.1
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 1.1e-18 96.7 100 57.0
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.2e-15 86.7 85 55.3
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 4.4e-15 84.7 79 60.8
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 2.2e-14 82.4 79 58.2
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 3.7e-14 81.6 79 58.2
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 4.9e-14 81.3 85 55.3
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 4.9e-14 81.3 85 54.1
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 8.3e-14 80.5 78 59.0
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 1.4e-13 79.7 86 51.2
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 5.4e-13 77.8 81 58.0
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 5.4e-13 77.8 77 57.1
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 7.0e-13 77.4 79 53.2
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 7.0e-13 77.4 79 53.2
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 7.0e-13 77.4 94 47.9
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 9.2e-13 77.0 86 55.8
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 9.2e-13 77.0 80 53.8
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 9.2e-13 77.0 77 57.1
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 9.2e-13 77.0 77 57.1
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 1.2e-12 76.6 84 51.2
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 1.2e-12 76.6 84 51.2
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 1.2e-12 76.6 79 53.2
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 1.2e-12 76.6 79 53.2
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 1.2e-12 76.6 79 53.2
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.2e-12 76.6 76 52.6
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 1.6e-12 76.3 78 55.1
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 1.6e-12 76.3 79 53.2
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 1.6e-12 76.3 83 55.4
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 2.0e-12 75.9 79 55.7
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 2.7e-12 75.5 93 49.5
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 2.7e-12 75.5 79 53.2
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 3.5e-12 75.1 79 53.2
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 3.5e-12 75.1 80 52.5
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 3.5e-12 75.1 80 52.5
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 4.6e-12 74.7 79 54.4
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 4.6e-12 74.7 79 54.4
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 6.0e-12 74.3 93 47.3
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 7.8e-12 73.9 77 55.8
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 7.8e-12 73.9 80 53.8
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 7.8e-12 73.9 93 48.4
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 7.8e-12 73.9 78 52.6
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 7.8e-12 73.9 93 48.4
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 7.8e-12 73.9 78 52.6
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 7.8e-12 73.9 93 48.4
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 7.8e-12 73.9 89 49.4
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 7.8e-12 73.9 79 54.4
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 1.0e-11 73.6 78 52.6
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 1.3e-11 73.2 93 48.4
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 1.3e-11 73.2 93 48.4
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 1.3e-11 73.2 84 50.0
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 1.3e-11 73.2 84 50.0
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 1.3e-11 73.2 77 55.8
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 1.3e-11 73.2 81 55.6
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 1.7e-11 72.8 96 46.9
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 1.7e-11 72.8 77 53.2
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 2.3e-11 72.4 78 52.6
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 2.3e-11 72.4 79 50.6
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 2.3e-11 72.4 93 48.4
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 2.3e-11 72.4 77 53.2
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 2.3e-11 72.4 79 54.4
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 3.0e-11 72.0 79 53.2
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 3.0e-11 72.0 77 54.5
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 3.9e-11 71.6 93 48.4
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 5.0e-11 71.2 82 47.6
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 6.6e-11 70.9 84 50.0
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 6.6e-11 70.9 77 54.5
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 6.6e-11 70.9 78 55.1
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 6.6e-11 70.9 77 51.9
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 8.6e-11 70.5 85 50.6
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 8.6e-11 70.5 85 50.6
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 8.6e-11 70.5 85 50.6
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 8.6e-11 70.5 78 55.1
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 8.6e-11 70.5 79 50.6
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 1.1e-10 70.1 94 44.7
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.5e-10 69.7 79 50.6
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 1.9e-10 69.3 77 53.2
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 1.9e-10 69.3 84 51.2
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 1.9e-10 69.3 77 54.5
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 2.5e-10 68.9 92 44.6
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 2.5e-10 68.9 77 51.9
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 3.3e-10 68.6 93 47.3
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 3.3e-10 68.6 94 47.9
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 4.3e-10 68.2 77 49.4
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 4.3e-10 68.2 77 50.6
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 5.6e-10 67.8 83 49.4
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 5.6e-10 67.8 85 49.4
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 3.6e-09 65.1 93 47.3
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 4.7e-09 64.7 80 47.5
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 6.2e-09 64.3 71 52.1
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 6.2e-09 64.3 77 48.1
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 2.3e-08 62.4 102 39.2
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 5.2e-08 61.2 71 52.1
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 6.8e-08 60.8 114 39.5
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 1.5e-07 59.7 52 57.7
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 4.4e-07 58.2 79 46.8
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 8.3e-06 53.9 114 37.7


User provided reference genes

Program Settings