Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.8e-267 925.2 440 100.0
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.5e-123 446.4 343 58.0
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.2e-114 417.5 344 56.4
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.0e-108 397.9 360 52.2
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 8.3e-103 378.3 346 50.9
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.2e-101 374.4 338 52.1
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.0e-100 369.0 350 50.0
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.1e-99 367.9 338 51.5
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.5e-99 366.7 357 49.3
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 9.5e-99 364.8 346 50.0
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.8e-98 363.2 338 50.6
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.8e-98 363.2 338 51.8
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.1e-97 361.3 339 49.9
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.1e-97 361.3 338 51.2
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 1.1e-97 361.3 338 51.8
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.4e-97 360.9 338 49.7
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.1e-97 359.8 339 50.1
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 4.0e-97 359.4 341 51.0
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 5.2e-97 359.0 338 50.9
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 6.8e-97 358.6 355 49.0
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 6.8e-97 358.6 355 48.7
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.2e-96 357.8 400 45.0
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.2e-96 357.8 362 47.8
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 1.5e-96 357.5 361 49.3
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 2.0e-96 357.1 338 50.9
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.0e-96 357.1 338 51.2
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 3.4e-96 356.3 377 47.5
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.4e-96 356.3 339 50.1
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 3.4e-96 356.3 338 51.5
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 3.4e-96 356.3 338 50.3
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 5.8e-96 355.5 341 50.4
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 5.8e-96 355.5 339 50.4
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 7.5e-96 355.1 383 46.0
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 9.8e-96 354.8 341 50.4
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 9.8e-96 354.8 352 47.7
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 9.8e-96 354.8 355 48.5
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 1.7e-95 354.0 352 48.9
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.7e-95 354.0 339 50.1
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 2.9e-95 353.2 354 48.0
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 3.7e-95 352.8 338 50.0
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 4.9e-95 352.4 338 50.9
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 4.9e-95 352.4 361 48.5
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 6.4e-95 352.1 338 50.0
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 8.3e-95 351.7 338 50.0
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 8.3e-95 351.7 338 50.6
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 8.3e-95 351.7 339 50.7
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 1.1e-94 351.3 353 48.2
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.1e-94 351.3 338 50.0
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.9e-94 350.5 338 49.7
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.9e-94 350.5 372 46.8
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.9e-94 350.5 338 50.3
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.4e-94 350.1 338 49.7
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 2.4e-94 350.1 346 49.1
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 3.2e-94 349.7 338 50.3
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 4.1e-94 349.4 339 49.6
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 5.4e-94 349.0 338 48.8
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 5.4e-94 349.0 339 49.3
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 5.4e-94 349.0 338 49.1
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 5.4e-94 349.0 338 48.5
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 7.1e-94 348.6 353 47.9
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 7.1e-94 348.6 351 48.7
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 9.2e-94 348.2 338 50.3
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 1.2e-93 347.8 338 48.5
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 2.1e-93 347.1 339 49.6
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.1e-93 347.1 357 48.5
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.7e-93 346.7 355 49.0
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 3.5e-93 346.3 338 49.7
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 4.6e-93 345.9 351 47.3
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 6.0e-93 345.5 353 48.7
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 6.0e-93 345.5 350 48.3
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 6.0e-93 345.5 344 47.7
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 6.0e-93 345.5 344 49.7
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.0e-92 344.7 350 48.0
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.3e-92 344.4 353 47.9
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.3e-92 344.4 337 48.1
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.7e-92 344.0 341 49.6
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.7e-92 344.0 338 49.1
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 2.3e-92 343.6 338 47.9
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 2.3e-92 343.6 338 49.7
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 3.0e-92 343.2 340 49.7
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 3.0e-92 343.2 355 46.2
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.9e-92 342.8 350 48.0
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 3.9e-92 342.8 338 50.0
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 5.1e-92 342.4 339 47.8
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 6.6e-92 342.0 352 47.4
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 8.6e-92 341.7 302 52.6
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 8.6e-92 341.7 340 49.7
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.5e-91 340.9 342 48.8
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.5e-91 340.9 345 47.8
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 2.5e-91 340.1 355 46.2
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 3.3e-91 339.7 359 47.9
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 3.3e-91 339.7 359 47.9
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 3.3e-91 339.7 359 47.9
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 5.6e-91 339.0 338 48.5
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 5.6e-91 339.0 338 49.1
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 7.3e-91 338.6 382 45.8
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 7.3e-91 338.6 367 46.6
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 7.3e-91 338.6 359 46.5
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 7.3e-91 338.6 338 48.2
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 9.5e-91 338.2 354 46.9
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 1.6e-90 337.4 338 47.6
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.6e-90 337.4 338 47.9
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.1e-90 337.0 338 48.5
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 2.1e-90 337.0 338 48.2
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 2.8e-90 336.7 339 48.7
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 2.8e-90 336.7 359 46.2
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 3.6e-90 336.3 339 47.8
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.6e-90 336.3 344 46.8
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 3.6e-90 336.3 340 48.8
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 4.7e-90 335.9 339 48.1
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 8.1e-90 335.1 354 46.6
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 1.1e-89 334.7 338 48.5
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 1.1e-89 334.7 338 48.5
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 1.1e-89 334.7 338 48.5
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.4e-89 334.3 338 48.8
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.4e-89 334.3 386 45.1
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.8e-89 334.0 350 47.4
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 1.8e-89 334.0 341 48.4
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 2.3e-89 333.6 419 43.0
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 4.0e-89 332.8 338 47.3
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 4.0e-89 332.8 369 45.5
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 5.2e-89 332.4 305 52.5
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 6.8e-89 332.0 353 46.7
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 2.0e-88 330.5 358 47.2
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 2.0e-88 330.5 338 47.0
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 2.6e-88 330.1 353 46.7
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.4e-88 329.7 359 43.2
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 3.4e-88 329.7 330 47.9
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 9.9e-88 328.2 338 47.3
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.3e-87 327.8 307 52.4
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 2.9e-87 326.6 338 46.7
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 2.9e-87 326.6 339 47.8
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 3.7e-87 326.2 338 47.0
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 3.7e-87 326.2 338 47.0
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 6.4e-87 325.5 289 53.6
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.4e-86 323.6 344 44.2
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 3.2e-86 323.2 339 46.0
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 3.2e-86 323.2 339 46.0
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 5.4e-86 322.4 340 45.9
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 7.1e-86 322.0 339 47.2
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.6e-85 320.9 347 47.3
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-85 320.5 339 47.8
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 2.1e-85 320.5 357 45.9
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 4.6e-85 319.3 339 46.6
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-84 317.4 357 42.6
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-84 316.6 339 47.5
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 3.9e-84 316.2 370 44.1
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 8.6e-84 315.1 425 40.9
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 7.3e-83 312.0 338 47.0
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.0e-80 303.9 341 43.1
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.8e-80 302.4 344 42.2
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.0e-76 291.6 348 43.7
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 2.1e-74 283.9 338 42.6
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 2.8e-74 283.5 284 48.2
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 1.3e-71 274.6 388 41.2
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-70 271.6 353 40.8
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 4.2e-70 269.6 364 39.8
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 7.1e-70 268.9 351 40.7
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 9.3e-70 268.5 341 40.2
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 3.5e-69 266.5 303 44.2
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.0e-68 265.0 253 51.4
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 1.4e-65 254.6 342 40.1
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 1.4e-65 254.6 354 40.4
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.0e-60 238.4 238 47.9
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.9e-60 236.5 248 46.0
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.6e-58 231.1 238 46.6
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 3.1e-57 226.9 238 47.1
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.5e-56 224.6 192 56.8
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 4.5e-56 223.0 238 46.2
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.8e-49 201.1 241 43.6
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 2.0e-35 154.5 416 29.6
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 4.2e-30 136.7 151 47.7
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.0e-23 115.5 113 47.8
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 4.7e-21 106.7 153 39.2
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.8e-20 102.4 120 39.2
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.3e-17 93.2 99 43.4
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.0e-08 64.7 91 34.1
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.7e-07 61.6 76 34.2


User provided reference genes

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