Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 9.9e-142 506.9 281 100.0
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 6.2e-43 178.7 159 60.4
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 2.6e-41 173.3 140 65.7
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 2.1e-38 163.7 169 52.7
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.4e-34 151.0 169 48.5
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.8e-34 150.6 171 49.7
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 2.4e-34 150.2 171 50.3
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 5.8e-33 145.6 143 55.9
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 3.8e-32 142.9 173 50.9
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 8.4e-32 141.7 126 56.3
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.9e-31 140.6 167 49.7
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 4.1e-31 139.4 175 45.7
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 4.1e-31 139.4 172 46.5
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 4.1e-31 139.4 133 57.1
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 7.1e-31 138.7 112 58.0
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 7.1e-31 138.7 165 48.5
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 7.1e-31 138.7 173 46.8
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 7.1e-31 138.7 138 54.3
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 9.2e-31 138.3 123 56.9
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.6e-30 137.5 164 48.8
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.6e-30 137.5 116 59.5
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.6e-30 137.5 131 54.2
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.6e-30 137.5 114 58.8
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.6e-30 137.5 171 46.2
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 2.1e-30 137.1 113 61.9
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 2.1e-30 137.1 133 53.4
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 2.1e-30 137.1 176 46.0
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 2.7e-30 136.7 133 54.9
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 2.7e-30 136.7 131 54.2
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 2.7e-30 136.7 155 47.1
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 2.7e-30 136.7 169 47.3
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 3.5e-30 136.3 123 56.1
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 3.5e-30 136.3 171 49.1
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 3.5e-30 136.3 133 54.9
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.5e-30 136.3 116 58.6
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 3.5e-30 136.3 116 58.6
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 4.6e-30 136.0 175 44.0
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 4.6e-30 136.0 123 56.1
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 4.6e-30 136.0 173 49.1
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 6.0e-30 135.6 170 47.1
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 6.0e-30 135.6 114 57.0
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 7.8e-30 135.2 116 57.8
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 7.8e-30 135.2 173 46.8
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 7.8e-30 135.2 173 46.8
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 7.8e-30 135.2 112 58.9
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 7.8e-30 135.2 171 46.2
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 7.8e-30 135.2 112 58.9
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 1.0e-29 134.8 156 47.4
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.0e-29 134.8 112 58.9
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.0e-29 134.8 172 45.3
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 1.0e-29 134.8 132 53.0
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 1.0e-29 134.8 133 52.6
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.0e-29 134.8 110 59.1
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.3e-29 134.4 113 57.5
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 1.3e-29 134.4 113 57.5
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.3e-29 134.4 113 57.5
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.3e-29 134.4 113 57.5
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 1.3e-29 134.4 167 47.9
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 1.3e-29 134.4 173 45.1
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 1.3e-29 134.4 133 53.4
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 1.3e-29 134.4 175 46.9
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 1.3e-29 134.4 169 44.4
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.7e-29 134.0 121 57.0
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 1.7e-29 134.0 116 57.8
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.7e-29 134.0 113 57.5
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 1.7e-29 134.0 171 44.4
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.7e-29 134.0 119 55.5
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 2.3e-29 133.7 133 53.4
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 2.3e-29 133.7 133 53.4
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 2.3e-29 133.7 114 59.6
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 3.0e-29 133.3 111 58.6
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 3.0e-29 133.3 178 44.4
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 3.0e-29 133.3 173 45.1
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 3.0e-29 133.3 176 45.5
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.0e-29 133.3 128 52.3
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 3.0e-29 133.3 134 52.2
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 3.0e-29 133.3 173 43.9
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 3.0e-29 133.3 179 45.8
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 3.9e-29 132.9 178 44.4
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 3.9e-29 132.9 178 44.4
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 3.9e-29 132.9 113 56.6
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 3.9e-29 132.9 133 50.4
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 3.9e-29 132.9 133 50.4
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 3.9e-29 132.9 166 44.6
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 3.9e-29 132.9 132 52.3
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 6.6e-29 132.1 176 44.9
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 6.6e-29 132.1 176 44.9
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 6.6e-29 132.1 169 47.9
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 6.6e-29 132.1 132 52.3
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 6.6e-29 132.1 110 60.0
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 8.7e-29 131.7 105 59.0
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 1.1e-28 131.3 138 50.0
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 1.5e-28 131.0 173 45.1
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.5e-28 131.0 133 51.1
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.9e-28 130.6 116 56.0
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 2.5e-28 130.2 170 44.7
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 2.5e-28 130.2 132 52.3
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 4.3e-28 129.4 171 42.7
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 4.3e-28 129.4 133 47.4
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 7.3e-28 128.6 175 44.6
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 7.3e-28 128.6 171 45.0
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 9.6e-28 128.3 114 56.1
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 9.6e-28 128.3 139 48.9
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 9.6e-28 128.3 138 50.0
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 9.6e-28 128.3 138 50.0
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.6e-27 127.5 171 45.0
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.6e-27 127.5 113 57.5
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 2.8e-27 126.7 144 48.6
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 3.6e-27 126.3 105 58.1
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 4.7e-27 125.9 135 48.9
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 4.7e-27 125.9 112 57.1
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 4.7e-27 125.9 103 60.2
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 4.7e-27 125.9 142 47.9
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 8.1e-27 125.2 135 49.6
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 8.1e-27 125.2 114 53.5
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 1.1e-26 124.8 177 44.6
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 4.0e-26 122.9 173 39.3
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 3.4e-25 119.8 160 43.1
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 2.2e-24 117.1 111 50.5
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 1.1e-23 114.8 147 42.9
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 3.2e-23 113.2 180 41.1
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.2e-22 111.3 85 61.2
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.6e-19 100.9 161 39.8
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 7.6e-17 92.0 106 47.2
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.1e-14 84.0 96 50.0
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 4.8e-11 72.8 89 40.4
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 1.5e-09 67.8 91 48.4
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 3.2e-07 60.1 56 48.2


User provided reference genes

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