Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 3.7e-146 521.5 271 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 6.3e-69 265.0 200 68.0
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 3.5e-67 259.2 248 56.0
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 1.3e-66 257.3 232 59.1
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 2.9e-66 256.1 221 58.4
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 3.8e-66 255.8 177 70.6
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 6.5e-66 255.0 177 72.3
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 8.5e-66 254.6 230 60.0
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 1.1e-65 254.2 185 69.2
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.1e-65 254.2 183 68.9
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 1.5e-65 253.8 175 72.0
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 1.5e-65 253.8 184 69.6
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 2.5e-65 253.1 175 70.9
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 4.2e-65 252.3 181 65.7
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 5.5e-65 251.9 229 58.5
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 7.2e-65 251.5 175 72.0
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 9.4e-65 251.1 185 68.1
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 9.4e-65 251.1 218 61.9
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 9.4e-65 251.1 184 68.5
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 1.2e-64 250.8 178 69.1
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 2.1e-64 250.0 184 68.5
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 2.1e-64 250.0 175 70.3
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 2.7e-64 249.6 175 69.7
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 2.7e-64 249.6 183 67.2
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 2.7e-64 249.6 175 69.7
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 2.7e-64 249.6 209 62.2
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 2.7e-64 249.6 236 55.9
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 2.7e-64 249.6 223 60.5
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 2.7e-64 249.6 177 68.9
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 4.7e-64 248.8 231 57.6
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 4.7e-64 248.8 178 68.5
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 6.1e-64 248.4 175 69.7
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 6.1e-64 248.4 183 66.7
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 1.0e-63 247.7 175 69.1
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 1.0e-63 247.7 177 69.5
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 1.0e-63 247.7 191 64.9
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 1.4e-63 247.3 186 66.1
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 1.4e-63 247.3 175 70.3
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.8e-63 246.9 228 56.1
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 1.8e-63 246.9 248 56.0
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 3.0e-63 246.1 194 65.5
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 4.0e-63 245.7 226 57.1
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 5.2e-63 245.4 182 67.0
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 6.8e-63 245.0 214 59.8
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 6.8e-63 245.0 177 68.9
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 8.8e-63 244.6 186 67.2
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 8.8e-63 244.6 175 68.0
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 1.5e-62 243.8 179 67.6
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.5e-62 243.8 179 68.7
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 1.5e-62 243.8 188 64.4
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 2.0e-62 243.4 185 65.9
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 2.0e-62 243.4 185 65.9
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 2.0e-62 243.4 188 65.4
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 2.0e-62 243.4 184 65.2
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 2.0e-62 243.4 178 66.9
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 2.6e-62 243.0 198 62.6
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 3.4e-62 242.7 179 67.6
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 3.4e-62 242.7 202 60.9
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 7.5e-62 241.5 188 66.0
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 9.8e-62 241.1 181 66.3
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 9.8e-62 241.1 279 50.5
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.3e-61 240.7 177 67.2
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 1.7e-61 240.4 175 68.0
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 3.1e-60 236.1 175 66.3
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 3.1e-60 236.1 183 63.4
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 1.2e-59 234.2 188 63.3
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 1.2e-59 234.2 178 66.3
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 2.0e-59 233.4 254 55.5
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 3.5e-59 232.6 174 67.2
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 4.5e-59 232.3 207 60.9
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 7.7e-59 231.5 187 62.6
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 3.8e-58 229.2 180 63.9
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 5.0e-58 228.8 185 61.1
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 6.6e-58 228.4 186 62.9
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 1.9e-57 226.9 204 59.3
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.1e-56 223.4 153 70.6
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 3.6e-56 222.6 175 64.6
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 5.2e-55 218.8 175 62.9
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 2.6e-54 216.5 152 68.4
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 5.7e-54 215.3 163 63.8
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 9.8e-54 214.5 176 62.5
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 8.3e-53 211.5 184 59.8
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 5.9e-51 205.3 144 70.1
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 8.6e-50 201.4 197 54.3
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 7.3e-49 198.4 192 54.2
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 2.8e-48 196.4 238 47.1
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 6.1e-48 195.3 189 55.6
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 1.3e-45 187.6 177 59.3
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 8.3e-45 184.9 207 50.7
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 2.0e-43 180.3 123 74.8
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.5e-41 174.1 119 69.7
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 5.6e-41 172.2 205 48.8
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 1.2e-38 164.5 115 67.0
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 7.8e-35 151.8 145 51.0
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 1.2e-30 137.9 93 72.0
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 2.6e-30 136.7 171 45.0
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 9.5e-25 118.2 127 53.5
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 2.4e-20 103.6 75 66.7
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 3.0e-18 96.7 65 69.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 3.2e-12 76.6 56 73.2
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 4.0e-07 59.7 56 51.8


User provided reference genes

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