Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0049s0043 Marchantia polymorpha HOM05D004890 ORTHO05D005869 0.0e+00 4506.8 2367 100.0
AagrBONN_evm.TU.Sc2ySwM_362.822 Anthoceros agrestis HOM05D004890 ORTHO05D005869 1.0e-215 755.7 2307 28.8
Pp3c13_15040 Physcomitrium patens HOM05D004890 ORTHO05D005869 9.7e-206 722.6 2291 28.9
TAR628G0176 Trochodendron aralioides HOM05D004890 ORTHO05D005869 3.0e-146 525.0 2280 25.1
ATR0810G151 Amborella trichopoda HOM05D004890 ORTHO05D005869 7.5e-142 510.4 2353 23.9
Nitab4.5_0010816g0010 Nicotiana tabacum HOM05D004890 ORTHO05D005869 4.9e-141 507.7 2272 24.6
Sopen10g024780 Solanum pennellii HOM05D004890 ORTHO05D005869 4.1e-140 504.6 2293 24.8
Sabra04G0112400 Salix brachista HOM05D004890 ORTHO05D005869 1.6e-136 492.7 2285 24.8
Potri.004G167600 Populus trichocarpa HOM05D004890 ORTHO05D005869 2.8e-136 491.9 2273 25.2
Solyc10g054860.2 Solanum lycopersicum HOM05D004890 ORTHO05D005869 8.9e-135 486.9 2270 24.7
CAN.G647.2 Capsicum annuum HOM05D004890 ORTHO05D005869 2.1e-131 475.7 2313 24.3
Nitab4.5_0000956g0200 Nicotiana tabacum HOM05D004890 ORTHO05D005869 1.3e-130 473.0 2336 23.8
TWI79G0196 Tripterygium wilfordii HOM05D004890 ORTHO05D005869 1.3e-130 473.0 2349 24.9
Atru.chr5.3215 Acer truncatum HOM05D004890 ORTHO05D005869 3.3e-129 468.4 2301 24.0
MD05G1115300 Malus domestica HOM05D004890 ORTHO05D005869 9.6e-129 466.8 2342 24.2
Thecc.02G067700 Theobroma cacao HOM05D004890 ORTHO05D005869 3.6e-128 464.9 2352 24.2
Gohir.D01G155500 Gossypium hirsutum HOM05D004890 ORTHO05D005869 4.7e-128 464.5 2297 24.8
Nn5g30145 Nelumbo nucifera HOM05D004890 ORTHO05D005869 1.8e-127 462.6 2369 24.5
Gorai.002G192700 Gossypium raimondii HOM05D004890 ORTHO05D005869 5.2e-127 461.1 2291 24.7
Duzib052G0882 Durio zibethinus HOM05D004890 ORTHO05D005869 8.9e-127 460.3 2291 24.1
Cc02_g16570 Coffea canephora HOM05D004890 ORTHO05D005869 1.2e-126 459.9 2322 24.6
CiPaw.05G076600 Carya illinoinensis HOM05D004890 ORTHO05D005869 5.8e-126 457.6 2252 25.0
CsaV3_2G015660 Cucumis sativus L. HOM05D004890 ORTHO05D005869 4.9e-125 454.5 2270 24.6
ClCG02G011430 Citrullus lanatus HOM05D004890 ORTHO05D005869 8.4e-125 453.8 2292 24.3
Gohir.A01G163400 Gossypium hirsutum HOM05D004890 ORTHO05D005869 8.4e-125 453.8 2299 24.7
Actinidia20483 Actinidia chinensis HOM05D004890 ORTHO05D005869 1.9e-124 452.6 2272 24.5
PGR042G1730 Punica granatum HOM05D004890 ORTHO05D005869 7.1e-124 450.7 2365 24.3
Rhsim11G0187500 Rhododendron simsii HOM05D004890 ORTHO05D005869 9.3e-124 450.3 2276 24.1
Sed0011290 Sechium edule HOM05D004890 ORTHO05D005869 1.2e-123 449.9 2265 24.5
QL11p047502 Quercus lobata HOM05D004890 ORTHO05D005869 2.1e-123 449.1 2357 23.5
FAN20G1645 Fragaria x ananassa HOM05D004890 ORTHO05D005869 2.7e-123 448.7 2300 24.1
Peaxi162Scf00538g00518 Petunia axillaris HOM05D004890 ORTHO05D005869 3.5e-123 448.4 2256 23.9
CANSAT54G0305 Cannabis sativa HOM05D004890 ORTHO05D005869 4.6e-123 448.0 2302 23.4
FAN15G0743 Fragaria x ananassa HOM05D004890 ORTHO05D005869 1.7e-122 446.0 2298 23.8
FvH4_2g02080 Fragaria vesca HOM05D004890 ORTHO05D005869 8.7e-122 443.7 2272 24.0
Aqoxy2G01603 Aquilegia oxysepala HOM05D004890 ORTHO05D005869 3.6e-120 438.3 2356 24.2
Ciclev10030126m.g Citrus clementina HOM05D004890 ORTHO05D005869 4.8e-120 438.0 2360 24.2
Manes.05G200700 Manihot esculenta HOM05D004890 ORTHO05D005869 6.9e-119 434.1 2364 24.0
MSTRG.20033 Avicennia marina HOM05D004890 ORTHO05D005869 2.0e-118 432.6 2270 23.2
Psat7g178440 Pisum sativum HOM05D004890 ORTHO05D005869 4.9e-117 427.9 2274 23.8
Lalb_Chr01g0001291 Lupinus albus HOM05D004890 ORTHO05D005869 8.4e-117 427.2 2318 24.4
Medtr4g075520 Medicago truncatula HOM05D004890 ORTHO05D005869 3.2e-116 425.2 2271 24.5
TPR.G17158 Trifolium pratense HOM05D004890 ORTHO05D005869 1.7e-114 419.5 2281 23.8
THA.LOC104811117 Tarenaya hassleriana HOM05D004890 ORTHO05D005869 6.6e-114 417.5 2279 23.7
AT4G30150 Arabidopsis thaliana HOM05D004890 ORTHO05D005869 5.6e-113 414.5 2281 24.0
HanXRQChr05g0137581 Helianthus annuus HOM05D004890 ORTHO05D005869 5.6e-113 414.5 2261 23.4
Ca_18997_v3 Cicer arietinum L. HOM05D004890 ORTHO05D005869 9.6e-113 413.7 2318 24.4
RcHm_v2.0_Chr2g0118221 Rosa chinensis HOM05D004890 ORTHO05D005869 4.0e-111 408.3 2380 23.3
Lsat_1_v5_gn_8_125620 Lactuca sativa HOM05D004890 ORTHO05D005869 5.3e-111 407.9 2243 23.7
SGA_v2.0_scaffold58G20451 Striga asiatica HOM05D004890 ORTHO05D005869 3.4e-110 405.2 2312 23.9
Carub.0007s1046 Capsella rubella HOM05D004890 ORTHO05D005869 4.5e-110 404.8 2291 23.5
Zm00001eb007680 Zea mays HOM05D004890 ORTHO05D005869 5.8e-110 404.4 2205 23.3
Sc18g0006690 Simmondsia chinensis HOM05D004890 ORTHO05D005869 2.9e-109 402.1 2257 23.7
CARHR238050 Cardamine hirsuta HOM05D004890 ORTHO05D005869 1.9e-108 399.4 2168 24.0
AL7G22040 Arabidopsis lyrata HOM05D004890 ORTHO05D005869 3.2e-108 398.7 2273 23.6
PSO675G7923 Papaver somniferum HOM05D004890 ORTHO05D005869 1.2e-107 396.7 2323 23.6
Sp7g28010 Schrenkiella parvula HOM05D004890 ORTHO05D005869 3.5e-107 395.2 2264 23.6
MELO3C020778.2 Cucumis melo HOM05D004890 ORTHO05D005869 6.0e-107 394.4 1837 24.8
ECA233G1715 Erigeron canadensis HOM05D004890 ORTHO05D005869 6.0e-107 394.4 2254 23.1
Lj3g0013742 Lotus japonicus HOM05D004890 ORTHO05D005869 1.3e-106 393.3 2292 23.7
BcaC09g51795 Brassica carinata HOM05D004890 ORTHO05D005869 3.9e-106 391.7 2253 23.7
C01p08940 Brassica napus HOM05D004890 ORTHO05D005869 3.9e-106 391.7 2253 23.7
Migut.B00164 Erythranthe guttata HOM05D004890 ORTHO05D005869 7.4e-105 387.5 2298 23.3
FAN24G3218 Fragaria x ananassa HOM05D004890 ORTHO05D005869 3.7e-104 385.2 2247 23.3
BraA01t00745Z Brassica rapa HOM05D004890 ORTHO05D005869 8.1e-104 384.0 2260 24.0
BolC1t00885H Brassica oleracea HOM05D004890 ORTHO05D005869 9.0e-103 380.6 2256 23.4
PSO541G5249 Papaver somniferum HOM05D004890 ORTHO05D005869 9.0e-103 380.6 2322 23.2
A01p08000 Brassica napus HOM05D004890 ORTHO05D005869 1.2e-102 380.2 2257 23.9
arahy.Tifrunner.gnm1.ann1.T6KP8R Arachis hypogaea HOM05D004890 ORTHO05D005869 3.4e-102 378.6 2293 23.5
Thhalv10024190m.g Eutrema salsugineum HOM05D004890 ORTHO05D005869 5.8e-102 377.9 2175 24.0
Haze_02203 Corylus avellana HOM05D004890 ORTHO05D005869 1.3e-101 376.7 2370 23.4
BcaNung04415 Brassica carinata HOM05D004890 ORTHO05D005869 3.3e-97 362.1 2265 23.5
GSVIVG01024104001 Vitis vinifera HOM05D004890 ORTHO05D005869 1.3e-96 360.1 2268 23.0
Hund00048 Selenicereus undatus HOM05D004890 ORTHO05D005869 1.0e-93 350.5 2332 22.9
EL10Ac9g21450 Beta vulgaris HOM05D004890 ORTHO05D005869 1.3e-93 350.1 2347 22.3
arahy.Tifrunner.gnm1.ann1.03J21L Arachis hypogaea HOM05D004890 ORTHO05D005869 2.9e-93 349.0 2256 23.1
SalBow6G6075 Salvia bowleyana HOM05D004890 ORTHO05D005869 7.2e-92 344.4 2263 22.6
Prupe.8G159900 Prunus persica HOM05D004890 ORTHO05D005869 1.6e-91 343.2 1662 24.9
DCAR_017255 Daucus carota HOM05D004890 ORTHO05D005869 7.9e-91 340.9 2309 22.5
Aa31LG2G20400 Aethionema arabicum HOM05D004890 ORTHO05D005869 1.0e-90 340.5 1817 23.7
AUR62013096 Chenopodium quinoa HOM05D004890 ORTHO05D005869 1.0e-90 340.5 2293 22.8
Dinv04970 Davidia involucrata HOM05D004890 ORTHO05D005869 1.8e-90 339.7 1832 23.0
SMO164G0051 Selaginella moellendorffii HOM05D004890 ORTHO05D005869 3.7e-88 332.0 2120 24.5
Lj5C185G17 Lonicera japonica HOM05D004890 ORTHO05D005869 1.3e-85 323.6 1856 22.9
VMungo0251G2716 Vigna mungo HOM05D004890 ORTHO05D005869 5.0e-85 321.6 2291 22.6
Glyma.08G099200 Glycine max HOM05D004890 ORTHO05D005869 5.1e-82 311.6 2282 22.8
CDE05G0022 Ceratophyllum demersum HOM05D004890 ORTHO05D005869 1.1e-79 303.9 1962 21.6
AUR62010102 Chenopodium quinoa HOM05D004890 ORTHO05D005869 1.1e-79 303.9 1804 22.8
vmacro02247 Vaccinium macrocarpon HOM05D004890 ORTHO05D005869 4.1e-79 302.0 2280 21.3
Eucgr.G01753 Eucalyptus grandis HOM05D004890 ORTHO05D005869 5.5e-76 291.6 1614 23.4
PSO210G5131 Papaver somniferum HOM05D004890 ORTHO05D005869 1.2e-75 290.4 1861 22.8
Phvul.002G179700 Phaseolus vulgaris HOM05D004890 ORTHO05D005869 7.9e-75 287.7 2193 22.5
Ah.01g022450 Amaranthus hybridus HOM05D004890 ORTHO05D005869 7.2e-68 264.6 1592 23.9
FAN27G2536 Fragaria x ananassa HOM05D004890 ORTHO05D005869 2.0e-65 256.5 1879 22.4
RcHm_v2.0_Chr6g0245311 Rosa chinensis HOM05D004890 ORTHO05D005869 3.8e-61 242.3 1460 23.5
Cpa.g.sc37.197 Carica papaya HOM05D004890 ORTHO05D005869 1.5e-60 240.4 1240 25.2
FAN20G2618 Fragaria x ananassa HOM05D004890 ORTHO05D005869 1.4e-58 233.8 556 29.9
Os03g0203100 Oryza sativa ssp. japonica HOM05D004890 ORTHO05D005869 8.3e-56 224.6 562 29.4
RcHm_v2.0_Chr6g0245301 Rosa chinensis HOM05D004890 ORTHO05D005869 4.1e-55 222.2 490 31.4
SHI05677 Sapria himalayana HOM05D004890 ORTHO05D005869 4.2e-52 212.2 1175 22.4
Oeu010054.2 Olea europaea HOM05D004890 ORTHO05D005869 4.4e-49 202.2 1026 24.3
SEGI_38665 Sequoiadendron giganteum HOM05D004890 ORTHO05D005869 3.1e-47 196.1 757 27.2
RcHm_v2.0_Chr6g0245521 Rosa chinensis HOM05D004890 ORTHO05D005869 7.0e-47 194.9 555 28.5
RcHm_v2.0_Chr6g0245571 Rosa chinensis HOM05D004890 ORTHO05D005869 7.8e-46 191.4 398 31.9
HPP92_020637 Vanilla planifolia HOM05D004890 ORTHO05D005869 5.2e-42 178.7 329 34.3
CBR_g39037 Chara braunii HOM05D004890 ORTHO05D005869 8.3e-32 144.8 257 34.6
SEGI_39969 Sequoiadendron giganteum HOM05D004890 ORTHO05D005869 6.0e-30 138.7 159 48.4
MD10G1117700 Malus domestica HOM05D004890 ORTHO05D005869 8.6e-29 134.8 168 42.3
PSO675G2309 Papaver somniferum HOM05D004890 ORTHO05D005869 2.3e-26 126.7 477 24.7
MD10G1117200 Malus domestica HOM05D004890 ORTHO05D005869 1.4e-23 117.5 853 21.9
HPP92_020638 Vanilla planifolia HOM05D004890 ORTHO05D005869 3.6e-19 102.8 372 24.5
Psat7g017880 Pisum sativum HOM05D001673 ORTHO05D029933 2.6e-17 96.7 183 31.1
DCAR_002202 Daucus carota HOM05D004890 ORTHO05D005869 9.9e-17 94.7 340 27.4
A07p11080 Brassica napus HOM05D004890 ORTHO05D005869 1.4e-15 90.9 103 47.6
A10p06990 Brassica napus HOM05D004890 ORTHO05D005869 1.6e-14 87.4 102 46.1
Glyma.08G231200 Glycine max HOM05D004890 ORTHO05D005869 1.6e-14 87.4 568 24.1
BolC5t32490H Brassica oleracea HOM05D004890 ORTHO05D005869 6.0e-14 85.5 98 44.9
BolC7t43608H Brassica oleracea HOM05D004890 ORTHO05D005869 6.0e-14 85.5 89 47.2
A01p19080 Brassica napus HOM05D004890 ORTHO05D005869 1.9e-12 80.5 93 45.2
BraA01t01851Z Brassica rapa HOM05D004890 ORTHO05D005869 1.9e-12 80.5 93 45.2
C05p37500 Brassica napus HOM05D004890 ORTHO05D005869 3.3e-12 79.7 84 45.2
Glyma.14G115300 Glycine max HOM05D004890 ORTHO05D005869 2.4e-10 73.6 86 43.0
BcaC05g27755 Brassica carinata HOM05D004890 ORTHO05D005869 3.8e-08 66.2 56 55.4
Oeu033530.1 Olea europaea HOM05D004890 ORTHO05D005869 4.9e-08 65.9 270 24.1
BolC1t00884H Brassica oleracea HOM05D004890 ORTHO05D005869 1.1e-07 64.7 115 38.3
RcHm_v2.0_Chr6g0245531 Rosa chinensis HOM05D004890 ORTHO05D005869 7.1e-07 62.0 292 25.7
C01p08930 Brassica napus HOM05D004890 ORTHO05D005869 9.3e-07 61.6 129 34.9
C01p08960 Brassica napus HOM05D004890 ORTHO05D005869 9.3e-07 61.6 51 56.9
Psat7g159840 Pisum sativum HOM05D003435 ORTHO05D005869 1.2e-06 61.2 116 31.0
MD10G1117600 Malus domestica HOM05D004890 ORTHO05D005869 4.6e-06 59.3 100 33.0


User provided reference genes

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