Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 6.5e-274 946.8 485 100.0
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 1.8e-127 460.3 492 56.3
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 6.6e-69 265.8 504 41.1
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 2.4e-58 230.7 502 36.7
CBR_g27764 Chara braunii HOM05D017347 ORTHO05D008131 2.1e-38 164.5 204 51.5
SEGI_18590 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 9.7e-36 155.6 488 31.6
SMO201G0051 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 2.4e-18 97.8 106 45.3
Pp3c14_22420 Physcomitrium patens HOM05D017347 ORTHO05D008131 1.4e-15 88.6 257 35.8
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 8.0e-14 82.8 100 41.0
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 1.8e-13 81.6 108 42.6
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 3.0e-13 80.9 157 36.9
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 1.5e-12 78.6 98 40.8
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 9.7e-12 75.9 112 37.5
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 9.7e-12 75.9 112 37.5
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.3e-11 75.5 117 37.6
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 1.3e-11 75.5 111 37.8
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 2.8e-11 74.3 112 38.4
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 3.7e-11 73.9 102 40.2
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 3.7e-11 73.9 102 40.2
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 3.7e-11 73.9 107 39.3
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 8.2e-11 72.8 97 42.3
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 1.1e-10 72.4 98 42.9
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.1e-10 72.4 102 39.2
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.1e-10 72.4 103 38.8
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.4e-10 72.0 100 40.0
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.4e-10 71.2 159 32.7
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 3.1e-10 70.9 109 37.6
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 4.1e-10 70.5 100 39.0
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.3e-10 70.1 102 38.2
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 5.3e-10 70.1 107 38.3
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 7.0e-10 69.7 102 39.2
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 9.1e-10 69.3 107 38.3
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 9.1e-10 69.3 100 42.0
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 1.2e-09 68.9 114 37.7
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 1.2e-09 68.9 105 34.3
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.2e-09 68.9 98 40.8
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 1.6e-09 68.6 112 40.2
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 7.7e-09 66.2 101 37.6
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 1.0e-08 65.9 117 34.2
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.0e-08 65.9 104 39.4
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 1.3e-08 65.5 100 34.0
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 2.2e-08 64.7 99 41.4
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 3.8e-08 63.9 99 33.3
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 6.5e-08 63.2 100 38.0
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 6.5e-08 63.2 124 33.1
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 1.1e-07 62.4 117 33.3
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 1.5e-07 62.0 125 32.8
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 1.9e-07 61.6 89 39.3
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 2.5e-07 61.2 97 40.2
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 2.5e-07 61.2 136 34.6
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 4.2e-07 60.5 57 52.6
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 5.5e-07 60.1 107 36.4
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 7.2e-07 59.7 111 35.1
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 1.2e-06 58.9 96 33.3
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 1.6e-06 58.5 47 57.4
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 1.6e-06 58.5 47 57.4
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 4.7e-06 57.0 100 30.0


User provided reference genes

Program Settings