Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0048s0017 Marchantia polymorpha HOM05D005741 ORTHO05D007240 2.8e-299 1031.2 515 100.0
Mapoly0027s0023 Marchantia polymorpha HOM05D005741 ORTHO05D007240 4.2e-90 336.3 507 41.0
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 1.4e-64 251.5 495 33.5
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 1.0e-59 235.3 470 33.0
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 6.8e-56 222.6 464 32.5
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 1.3e-54 218.4 463 32.6
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 1.4e-53 214.9 455 32.3
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 2.4e-53 214.2 464 30.4
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 9.2e-53 212.2 510 30.6
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 1.2e-52 211.8 484 30.0
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 1.6e-52 211.5 464 30.2
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 2.1e-52 211.1 474 29.7
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 3.5e-52 210.3 501 31.7
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 3.5e-52 210.3 454 32.2
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 6.0e-52 209.5 510 31.2
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 2.3e-51 207.6 524 29.6
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 5.1e-51 206.5 474 30.8
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 1.5e-50 204.9 480 30.8
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 2.5e-50 204.1 497 30.6
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 4.3e-50 203.4 454 30.4
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 4.3e-50 203.4 510 30.6
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 4.3e-50 203.4 453 30.7
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 5.6e-50 203.0 458 31.9
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 1.2e-49 201.8 501 30.7
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 1.2e-49 201.8 456 30.5
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 1.6e-49 201.4 456 31.6
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 2.1e-49 201.1 453 31.3
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 2.1e-49 201.1 528 29.4
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 2.1e-49 201.1 463 30.5
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 2.1e-49 201.1 478 31.6
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 2.8e-49 200.7 447 30.2
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 2.8e-49 200.7 505 30.7
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 2.8e-49 200.7 533 30.0
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 3.6e-49 200.3 452 30.5
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 4.7e-49 199.9 512 30.1
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 6.2e-49 199.5 452 30.3
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 8.1e-49 199.1 444 30.4
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 1.1e-48 198.7 454 30.6
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 1.1e-48 198.7 450 30.9
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 1.4e-48 198.4 453 32.5
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 1.4e-48 198.4 453 30.5
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 3.1e-48 197.2 457 30.2
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 5.2e-48 196.4 483 30.2
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 5.2e-48 196.4 449 31.2
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 6.8e-48 196.1 450 30.7
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 6.8e-48 196.1 455 29.9
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 6.8e-48 196.1 531 28.6
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 8.9e-48 195.7 505 29.9
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 8.9e-48 195.7 453 32.5
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 1.2e-47 195.3 458 31.2
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 1.2e-47 195.3 452 29.6
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 1.2e-47 195.3 458 31.2
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 1.5e-47 194.9 456 30.7
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 1.5e-47 194.9 452 30.5
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 1.5e-47 194.9 488 29.1
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 3.4e-47 193.7 506 28.7
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 3.4e-47 193.7 446 29.6
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 5.8e-47 193.0 450 29.1
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 5.8e-47 193.0 479 30.1
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 7.6e-47 192.6 455 29.7
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 7.6e-47 192.6 450 31.3
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 1.3e-46 191.8 452 29.9
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 1.7e-46 191.4 525 28.6
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 2.2e-46 191.0 456 30.3
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 2.2e-46 191.0 525 30.1
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 2.2e-46 191.0 447 30.9
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 2.2e-46 191.0 450 30.9
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 2.9e-46 190.7 453 30.2
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 3.8e-46 190.3 458 30.8
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 3.8e-46 190.3 459 32.5
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 4.9e-46 189.9 486 29.6
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 6.4e-46 189.5 509 29.3
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 8.4e-46 189.1 456 29.6
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 8.4e-46 189.1 527 28.7
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 1.1e-45 188.7 451 30.2
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 1.4e-45 188.3 505 28.7
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 1.4e-45 188.3 509 28.9
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 1.9e-45 188.0 513 29.8
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 1.9e-45 188.0 513 29.8
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 2.4e-45 187.6 513 29.8
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 2.4e-45 187.6 453 30.0
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 5.4e-45 186.4 453 29.6
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 9.3e-45 185.7 453 29.4
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 3.5e-44 183.7 424 30.4
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 6.0e-44 183.0 500 29.0
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 3.0e-43 180.6 478 28.7
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 3.9e-43 180.3 451 28.4
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 5.1e-43 179.9 455 28.6
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 6.6e-43 179.5 455 28.4
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 1.9e-42 177.9 437 28.4
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 2.5e-42 177.6 455 29.0
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 5.6e-42 176.4 524 27.5
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 1.6e-41 174.9 423 29.3
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 2.1e-41 174.5 481 27.9
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 6.2e-41 172.9 433 29.6
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 8.1e-41 172.6 448 28.3
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 3.1e-40 170.6 459 29.2
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 4.0e-40 170.2 423 29.8
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 3.4e-39 167.2 423 29.8
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 9.9e-39 165.6 392 31.4
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 3.5e-36 157.1 453 26.7
Gohir.A03G006700 Gossypium hirsutum HOM05D005741 ORTHO05D007240 4.6e-36 156.8 385 31.2
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 4.6e-36 156.8 395 28.1
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 7.9e-36 156.0 395 28.1
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 3.2e-29 134.0 364 29.7
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 1.0e-27 129.0 434 25.6
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 5.1e-27 126.7 453 24.3
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 1.3e-25 122.1 366 26.5
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 2.1e-25 121.3 361 26.3
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 2.6e-23 114.4 364 25.8
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 4.5e-23 113.6 365 26.6
Aa31LG6G180 Aethionema arabicum HOM05D005741 ORTHO05D007240 5.5e-21 106.7 223 35.4
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 4.3e-18 97.1 300 28.0
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 2.4e-16 91.3 238 27.3
Glyma.19G032233 Glycine max HOM05D005741 ORTHO05D007240 4.5e-15 87.0 139 37.4
Pp3c6_17590 Physcomitrium patens HOM05D005741 ORTHO05D007240 1.0e-14 85.9 282 23.0
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 4.6e-12 77.0 151 31.8
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 1.5e-10 72.0 197 27.9
Pp3c6_17579 Physcomitrium patens HOM05D005741 ORTHO05D007240 1.9e-10 71.6 80 37.5
QL05p056241 Quercus lobata HOM05D005741 ORTHO05D007240 5.7e-10 70.1 211 28.9
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 2.6e-07 61.2 342 19.3
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 8.5e-06 56.2 170 26.5


User provided reference genes

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