Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 9.6e-238 826.6 479 100.0
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 3.2e-39 167.2 142 62.7
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.1e-36 158.7 354 36.2
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 7.1e-31 139.4 139 55.4
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 4.6e-30 136.7 104 65.4
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 5.2e-26 123.2 168 47.6
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 6.9e-26 122.9 157 50.3
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 2.6e-25 120.9 159 48.4
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 7.6e-25 119.4 164 48.2
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 2.2e-24 117.9 154 49.4
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 4.9e-24 116.7 112 58.0
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 6.4e-24 116.3 110 54.5
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.4e-24 116.3 154 46.1
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 1.1e-23 115.5 153 49.0
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 1.1e-23 115.5 149 47.0
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 1.1e-23 115.5 110 54.5
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 1.9e-23 114.8 108 56.5
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 2.4e-23 114.4 147 46.3
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 2.4e-23 114.4 105 58.1
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 2.4e-23 114.4 110 54.5
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 3.2e-23 114.0 151 47.0
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 4.2e-23 113.6 117 57.3
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 4.2e-23 113.6 144 47.2
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 5.4e-23 113.2 147 45.6
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 5.4e-23 113.2 147 45.6
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 5.4e-23 113.2 141 48.9
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 7.1e-23 112.8 108 55.6
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 7.1e-23 112.8 149 45.6
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 7.1e-23 112.8 154 48.1
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 7.1e-23 112.8 172 44.2
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 9.3e-23 112.5 154 42.9
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 1.2e-22 112.1 150 46.0
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 1.2e-22 112.1 111 55.9
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 2.1e-22 111.3 152 45.4
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 4.6e-22 110.2 157 45.2
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 4.6e-22 110.2 107 55.1
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 6.0e-22 109.8 116 53.4
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 6.0e-22 109.8 151 43.0
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 7.8e-22 109.4 109 56.0
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 7.8e-22 109.4 147 46.3
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 7.8e-22 109.4 151 46.4
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 7.8e-22 109.4 106 56.6
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 1.0e-21 109.0 116 55.2
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 1.0e-21 109.0 114 49.1
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.3e-21 108.6 146 47.3
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.3e-21 108.6 146 47.3
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 1.3e-21 108.6 171 43.9
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.3e-21 108.6 140 46.4
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 1.7e-21 108.2 152 42.8
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 1.7e-21 108.2 144 47.9
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 1.7e-21 108.2 145 46.9
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 2.3e-21 107.8 150 46.7
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 2.3e-21 107.8 172 42.4
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 2.3e-21 107.8 103 58.3
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 2.3e-21 107.8 145 46.2
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 3.9e-21 107.1 136 46.3
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 3.9e-21 107.1 104 55.8
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 3.9e-21 107.1 105 56.2
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 3.9e-21 107.1 112 55.4
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 5.1e-21 106.7 145 46.9
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 6.6e-21 106.3 135 47.4
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 6.6e-21 106.3 145 47.6
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 6.6e-21 106.3 105 56.2
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 6.6e-21 106.3 158 43.7
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 1.1e-20 105.5 144 43.8
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 1.1e-20 105.5 143 45.5
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 3.3e-20 104.0 146 46.6
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 3.3e-20 104.0 153 45.1
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 5.6e-20 103.2 150 42.0
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 5.6e-20 103.2 105 55.2
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 5.6e-20 103.2 109 55.0
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 7.3e-20 102.8 136 46.3
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 7.3e-20 102.8 150 41.3
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 7.3e-20 102.8 110 55.5
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 7.3e-20 102.8 117 53.0
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 9.6e-20 102.4 151 41.7
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 9.6e-20 102.4 104 56.7
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 1.3e-19 102.1 156 41.0
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 1.3e-19 102.1 109 51.4
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 1.3e-19 102.1 159 40.9
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 1.3e-19 102.1 117 51.3
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 1.3e-19 102.1 129 50.4
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 1.6e-19 101.7 116 51.7
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 1.6e-19 101.7 117 51.3
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 2.8e-19 100.9 152 42.1
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 3.6e-19 100.5 116 51.7
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.6e-19 100.5 148 43.9
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.6e-19 100.5 148 43.9
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 3.6e-19 100.5 172 37.8
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 4.8e-19 100.1 143 45.5
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 4.8e-19 100.1 105 53.3
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.8e-19 100.1 105 53.3
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.8e-19 100.1 105 53.3
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 8.1e-19 99.4 109 53.2
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 8.1e-19 99.4 105 51.4
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 8.1e-19 99.4 116 53.4
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.1e-18 99.0 105 52.4
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 1.4e-18 98.6 103 53.4
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 1.8e-18 98.2 147 44.2
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 2.4e-18 97.8 147 43.5
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 2.4e-18 97.8 151 40.4
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 4.0e-18 97.1 134 45.5
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 9.0e-18 95.9 109 47.7
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 3.2e-15 87.4 93 51.6
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 9.3e-15 85.9 83 55.4
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 3.0e-13 80.9 86 50.0
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 5.3e-10 70.1 92 44.6
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 3.4e-09 67.4 55 60.0
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 7.6e-09 66.2 55 60.0


User provided reference genes

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