Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 6.7e-229 797.0 392 100.0
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 3.0e-104 382.9 325 57.5
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 8.7e-104 381.3 384 51.8
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.2e-102 376.7 368 52.7
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 3.7e-102 375.9 325 57.2
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 4.8e-102 375.6 323 57.0
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 8.2e-102 374.8 332 56.0
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 3.1e-101 372.9 325 57.8
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 5.3e-101 372.1 323 55.7
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 9.1e-101 371.3 324 56.8
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 1.2e-100 370.9 324 56.2
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.5e-100 370.5 340 54.4
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 1.5e-100 370.5 335 55.5
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 2.0e-100 370.2 325 56.3
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 3.4e-100 369.4 326 57.1
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 4.5e-100 369.0 325 56.6
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 5.9e-100 368.6 362 51.4
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 7.7e-100 368.2 385 49.6
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 1.3e-99 367.5 334 54.8
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.3e-99 367.5 387 49.9
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.7e-99 367.1 325 56.3
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 2.9e-99 366.3 323 56.7
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.8e-99 365.9 343 53.1
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 5.0e-99 365.5 329 55.9
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 5.0e-99 365.5 325 56.3
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 6.5e-99 365.2 392 48.5
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 6.5e-99 365.2 325 56.3
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 6.5e-99 365.2 326 56.1
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 8.5e-99 364.8 323 56.7
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 8.5e-99 364.8 323 54.8
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 8.5e-99 364.8 323 53.9
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 1.1e-98 364.4 370 50.8
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 1.1e-98 364.4 343 53.4
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.1e-98 364.4 341 53.4
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.1e-98 364.4 325 56.0
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.4e-98 364.0 317 57.1
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 1.9e-98 363.6 385 49.6
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 2.5e-98 363.2 333 55.6
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 3.2e-98 362.8 323 55.7
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.2e-98 362.8 339 53.7
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 3.2e-98 362.8 323 54.5
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 3.2e-98 362.8 323 55.4
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 5.5e-98 362.1 323 53.6
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 5.5e-98 362.1 384 49.2
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 9.4e-98 361.3 359 52.1
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 1.2e-97 360.9 323 55.4
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 2.7e-97 359.8 326 54.3
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 3.6e-97 359.4 384 49.2
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 4.6e-97 359.0 321 54.2
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 4.6e-97 359.0 329 55.0
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.8e-96 357.1 328 53.4
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.8e-96 357.1 328 53.4
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 1.8e-96 357.1 327 55.0
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 2.3e-96 356.7 327 55.0
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 2.3e-96 356.7 363 51.8
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 2.3e-96 356.7 324 54.6
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 3.0e-96 356.3 332 52.4
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 3.9e-96 355.9 326 52.8
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 5.1e-96 355.5 333 52.6
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 6.7e-96 355.1 323 53.9
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 6.7e-96 355.1 324 54.0
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 6.7e-96 355.1 324 54.9
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 2.0e-95 353.6 391 47.6
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 4.4e-95 352.4 327 53.8
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 4.4e-95 352.4 323 52.3
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 4.4e-95 352.4 323 52.6
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 5.7e-95 352.1 332 53.0
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 5.7e-95 352.1 324 53.7
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 5.7e-95 352.1 318 53.5
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 9.7e-95 351.3 398 45.7
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 9.7e-95 351.3 354 50.6
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 1.7e-94 350.5 332 52.7
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 1.7e-94 350.5 323 53.6
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.7e-94 350.5 318 53.5
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 2.8e-94 349.7 327 54.4
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 2.8e-94 349.7 355 49.6
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 6.3e-94 348.6 349 50.1
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 1.1e-93 347.8 363 50.7
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 1.1e-93 347.8 370 48.4
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.8e-93 347.1 388 49.0
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 2.4e-93 346.7 382 48.2
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 2.4e-93 346.7 391 47.6
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 2.4e-93 346.7 384 47.4
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 4.1e-93 345.9 323 53.9
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 6.9e-93 345.1 383 48.0
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 9.1e-93 344.7 383 47.3
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 1.2e-92 344.4 383 49.1
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 1.2e-92 344.4 383 49.1
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 1.5e-92 344.0 381 46.5
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.6e-92 343.2 313 53.0
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 5.9e-92 342.0 314 54.1
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 5.9e-92 342.0 323 52.3
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 7.7e-92 341.7 383 49.3
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 2.2e-91 340.1 323 52.6
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.1e-90 337.8 407 44.0
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.9e-90 337.0 383 46.7
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 1.6e-89 334.0 372 48.9
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 1.8e-88 330.5 307 53.4
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.1e-87 327.8 298 53.4
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 6.3e-86 322.0 303 51.8
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 6.5e-83 312.0 319 50.2
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 4.4e-79 299.3 435 40.0
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 3.7e-78 296.2 281 50.9
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 2.7e-76 290.0 323 49.2
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 8.0e-65 251.9 254 50.0
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.3e-62 244.6 329 42.6
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 6.3e-62 242.3 243 51.4
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 3.9e-27 126.7 117 49.6
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 6.2e-25 119.4 87 64.4
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 1.7e-22 111.3 67 73.1
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 4.3e-18 96.7 361 28.5
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.4e-13 80.9 45 77.8
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.2e-12 78.6 108 43.5
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 2.1e-12 77.8 77 45.5
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 3.9e-11 73.6 65 49.2
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 2.6e-07 60.8 46 56.5


User provided reference genes

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