Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 4.7e-106 387.9 197 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 1.0e-44 184.1 192 52.1
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 2.5e-43 179.5 180 55.6
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 3.3e-43 179.1 177 54.8
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 7.4e-43 177.9 175 52.0
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 9.6e-43 177.6 179 53.6
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.3e-42 177.2 175 52.0
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 1.6e-42 176.8 175 51.4
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 2.1e-42 176.4 177 53.7
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.8e-42 176.0 175 52.0
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.8e-42 176.0 175 52.0
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 6.2e-42 174.9 179 53.1
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 6.2e-42 174.9 182 51.1
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 1.1e-41 174.1 175 54.3
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 2.4e-41 172.9 181 50.8
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 5.3e-41 171.8 176 52.8
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 5.3e-41 171.8 174 51.1
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 6.9e-41 171.4 174 52.3
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 9.0e-41 171.0 175 51.4
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 1.2e-40 170.6 179 50.8
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 2.0e-40 169.9 174 52.9
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 2.6e-40 169.5 175 52.0
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 2.6e-40 169.5 175 52.0
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 2.6e-40 169.5 178 51.1
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 2.6e-40 169.5 198 51.5
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 3.4e-40 169.1 175 52.0
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 4.5e-40 168.7 174 51.1
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 4.5e-40 168.7 176 52.3
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 4.5e-40 168.7 178 51.1
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 4.5e-40 168.7 178 51.1
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 5.8e-40 168.3 175 54.3
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 1.0e-39 167.5 177 50.3
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 1.3e-39 167.2 186 47.3
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 1.3e-39 167.2 186 47.3
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 1.3e-39 167.2 175 49.7
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 1.7e-39 166.8 190 48.9
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 1.7e-39 166.8 180 48.3
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 1.7e-39 166.8 187 48.1
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 1.7e-39 166.8 177 52.0
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 3.8e-39 165.6 173 51.4
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 5.0e-39 165.2 179 53.1
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 5.0e-39 165.2 183 47.5
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 6.5e-39 164.9 173 50.3
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 8.4e-39 164.5 179 49.7
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 8.4e-39 164.5 188 47.3
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 1.1e-38 164.1 179 50.3
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 1.1e-38 164.1 171 50.3
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.4e-38 163.7 179 49.2
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 1.9e-38 163.3 179 49.7
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 1.9e-38 163.3 179 49.7
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 2.5e-38 162.9 178 49.4
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 3.2e-38 162.5 185 48.6
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 4.2e-38 162.2 173 49.7
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 7.1e-38 161.4 187 46.5
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 7.1e-38 161.4 175 48.6
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 9.3e-38 161.0 180 48.3
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 9.3e-38 161.0 175 49.7
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 1.6e-37 160.2 178 47.2
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 2.7e-37 159.5 183 47.0
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 2.7e-37 159.5 182 48.4
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 3.5e-37 159.1 175 49.1
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 4.6e-37 158.7 179 46.4
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 6.1e-37 158.3 183 48.1
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 6.1e-37 158.3 182 47.3
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 7.9e-37 157.9 174 49.4
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 7.9e-37 157.9 188 47.3
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 2.3e-36 156.4 172 49.4
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 2.3e-36 156.4 174 48.3
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 3.0e-36 156.0 182 47.3
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 3.0e-36 156.0 174 47.7
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 3.9e-36 155.6 169 49.1
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 5.1e-36 155.2 189 46.0
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 6.7e-36 154.8 173 46.8
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 6.7e-36 154.8 175 46.9
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 8.7e-36 154.5 180 46.7
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.5e-35 153.7 182 47.3
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 1.5e-35 153.7 179 48.0
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 2.5e-35 152.9 178 47.8
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 5.7e-35 151.8 177 46.3
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 2.2e-34 149.8 203 43.3
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 2.8e-34 149.4 189 45.0
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 8.2e-34 147.9 159 50.9
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 1.8e-33 146.7 175 46.3
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 6.9e-33 144.8 155 50.3
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 6.9e-33 144.8 193 43.0
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 2.0e-32 143.3 192 43.8
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 2.6e-32 142.9 193 42.5
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 4.5e-32 142.1 160 49.4
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 1.7e-31 140.2 140 53.6
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 2.2e-31 139.8 160 48.8
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 1.9e-30 136.7 161 45.3
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 4.2e-30 135.6 162 45.7
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 3.0e-28 129.4 155 45.2
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 1.1e-27 127.5 96 63.5
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 1.8e-25 120.2 175 38.3
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 2.2e-23 113.2 142 47.2
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 2.2e-23 113.2 134 48.5
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 4.2e-22 109.0 131 48.9
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 2.1e-21 106.7 134 46.3
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 2.7e-21 106.3 139 43.2
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 2.7e-21 106.3 132 44.7
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 7.9e-21 104.8 131 47.3
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 7.9e-21 104.8 190 38.4
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 3.9e-20 102.4 153 43.8
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 2.2e-18 96.7 126 44.4
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 2.4e-17 93.2 208 33.2
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 5.9e-16 88.6 145 35.9
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 6.5e-15 85.1 174 36.8
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 1.5e-14 84.0 153 34.6
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 1.5e-14 84.0 105 47.6
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 3.6e-13 79.3 129 41.1
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 2.5e-06 56.6 48 50.0
Zm00001eb177740 Zea mays HOM05D002799 ORTHO05D008889 5.5e-06 55.5 41 58.5


User provided reference genes

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