Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0046s0092 Marchantia polymorpha HOM05D006315 ORTHO05D008052 9.4e-212 740.0 381 100.0
AagrBONN_evm.TU.Sc2ySwM_368.1535 Anthoceros agrestis HOM05D006315 ORTHO05D008052 3.0e-85 319.7 332 52.7
Pp3c1_23410 Physcomitrium patens HOM05D006315 ORTHO05D008052 2.6e-84 316.6 372 47.8
Sabra13G0023200 Salix brachista HOM05D006315 ORTHO05D008052 7.0e-82 308.5 354 47.7
Aa31LG11G9300 Aethionema arabicum HOM05D006315 ORTHO05D008052 3.5e-81 306.2 338 47.6
Oeu020852.1 Olea europaea HOM05D006315 ORTHO05D008052 3.5e-81 306.2 329 49.8
Prupe.6G325900 Prunus persica HOM05D006315 ORTHO05D008052 1.3e-80 304.3 355 47.9
Sp2g20750 Schrenkiella parvula HOM05D006315 ORTHO05D008052 2.9e-80 303.1 309 50.8
CAN.G1034.11 Capsicum annuum HOM05D006315 ORTHO05D008052 1.1e-79 301.2 308 50.6
FAN09G2245 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.5e-79 300.8 364 47.3
QL03p006996 Quercus lobata HOM05D006315 ORTHO05D008052 1.5e-79 300.8 270 54.8
AL6G39450 Arabidopsis lyrata HOM05D006315 ORTHO05D008052 1.9e-79 300.4 312 50.3
FAN02G1008 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.9e-79 300.4 363 46.3
Sopen01g042560 Solanum pennellii HOM05D006315 ORTHO05D008052 1.9e-79 300.4 292 52.4
PGSC0003DMG400018995 Solanum tuberosum HOM05D006315 ORTHO05D008052 1.9e-79 300.4 311 50.5
RcHm_v2.0_Chr3g0454751 Rosa chinensis HOM05D006315 ORTHO05D008052 2.5e-79 300.1 327 48.3
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 3.3e-79 299.7 360 46.1
FAN05G4943 Fragaria x ananassa HOM05D006315 ORTHO05D008052 3.3e-79 299.7 355 46.8
Potri.013G020800 Populus trichocarpa HOM05D006315 ORTHO05D008052 3.3e-79 299.7 354 46.9
SEGI_29864 Sequoiadendron giganteum HOM05D006315 ORTHO05D008052 3.3e-79 299.7 371 46.1
Thhalv10004542m.g Eutrema salsugineum HOM05D006315 ORTHO05D008052 4.2e-79 299.3 272 53.3
TPR.G6112 Trifolium pratense HOM05D006315 ORTHO05D008052 5.5e-79 298.9 305 50.8
Gohir.D11G275200 Gossypium hirsutum HOM05D006315 ORTHO05D008052 7.2e-79 298.5 309 49.2
Gorai.007G297000 Gossypium raimondii HOM05D006315 ORTHO05D008052 7.2e-79 298.5 309 49.2
CSS0039769 Camellia sinensis var. sinensis HOM05D006315 ORTHO05D008052 9.5e-79 298.1 321 47.7
FvH4_6g05840 Fragaria vesca HOM05D006315 ORTHO05D008052 1.2e-78 297.7 355 46.5
PGR083G2010 Punica granatum HOM05D006315 ORTHO05D008052 1.2e-78 297.7 343 48.4
ECA236G1566 Erigeron canadensis HOM05D006315 ORTHO05D008052 1.6e-78 297.4 271 54.6
Lsat_1_v5_gn_9_86000 Lactuca sativa HOM05D006315 ORTHO05D008052 2.1e-78 297.0 311 49.8
MBI01_g44539_MAGBIO Magnolia biondii HOM05D006315 ORTHO05D008052 2.1e-78 297.0 261 55.9
Manes.09G167100 Manihot esculenta HOM05D006315 ORTHO05D008052 2.1e-78 297.0 309 49.8
Thecc.05G303200 Theobroma cacao HOM05D006315 ORTHO05D008052 2.1e-78 297.0 311 50.2
Carub.0006s2500 Capsella rubella HOM05D006315 ORTHO05D008052 2.8e-78 296.6 339 47.8
Nn6g32180 Nelumbo nucifera HOM05D006315 ORTHO05D008052 4.7e-78 295.8 340 48.2
Cpa.g.sc48.53 Carica papaya HOM05D006315 ORTHO05D008052 6.1e-78 295.4 261 55.9
Dinv40287 Davidia involucrata HOM05D006315 ORTHO05D008052 1.0e-77 294.7 312 51.0
Ca_10111_v3 Cicer arietinum L. HOM05D006315 ORTHO05D008052 1.4e-77 294.3 314 49.0
CsaV3_2G005300 Cucumis sativus L. HOM05D006315 ORTHO05D008052 1.4e-77 294.3 356 45.2
GSVIVG01000051001 Vitis vinifera HOM05D006315 ORTHO05D008052 1.4e-77 294.3 314 49.7
Actinidia05703 Actinidia chinensis HOM05D006315 ORTHO05D008052 1.8e-77 293.9 313 49.5
FAN14G3373 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.8e-77 293.9 362 45.9
vmacro05019 Vaccinium macrocarpon HOM05D006315 ORTHO05D008052 2.3e-77 293.5 267 54.7
Ciclev10001688m.g Citrus clementina HOM05D006315 ORTHO05D008052 3.0e-77 293.1 310 47.7
MD12G1219300 Malus domestica HOM05D006315 ORTHO05D008052 3.0e-77 293.1 313 50.8
RhsimUnG0225800 Rhododendron simsii HOM05D006315 ORTHO05D008052 3.0e-77 293.1 314 49.4
AUR62000828 Chenopodium quinoa HOM05D006315 ORTHO05D008052 4.0e-77 292.7 309 49.5
THA.LOC104818698 Tarenaya hassleriana HOM05D006315 ORTHO05D008052 5.2e-77 292.4 334 47.9
ClCG02G015800 Citrullus lanatus HOM05D006315 ORTHO05D008052 6.8e-77 292.0 356 45.5
Eucgr.B01969 Eucalyptus grandis HOM05D006315 ORTHO05D008052 8.9e-77 291.6 326 48.5
ATR1120G073 Amborella trichopoda HOM05D006315 ORTHO05D008052 1.2e-76 291.2 265 53.6
Duzib128G1131 Durio zibethinus HOM05D006315 ORTHO05D008052 1.2e-76 291.2 316 48.7
C09p05830 Brassica napus HOM05D006315 ORTHO05D008052 1.5e-76 290.8 298 50.3
BolC9t53510H Brassica oleracea HOM05D006315 ORTHO05D008052 1.5e-76 290.8 298 50.3
CARHR186120 Cardamine hirsuta HOM05D006315 ORTHO05D008052 1.5e-76 290.8 333 47.7
FAN14G1304 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.5e-76 290.8 362 45.6
Nitab4.5_0004395g0040 Nicotiana tabacum HOM05D006315 ORTHO05D008052 2.6e-76 290.0 311 49.8
TAR381G0108 Trochodendron aralioides HOM05D006315 ORTHO05D008052 2.6e-76 290.0 264 54.5
TWI36G1375 Tripterygium wilfordii HOM05D006315 ORTHO05D008052 3.4e-76 289.7 362 45.9
MSTRG.16964 Avicennia marina HOM05D006315 ORTHO05D008052 4.4e-76 289.3 313 47.9
Lalb_Chr02g0148251 Lupinus albus HOM05D006315 ORTHO05D008052 4.4e-76 289.3 308 49.7
Peaxi162Scf00037g00325 Petunia axillaris HOM05D006315 ORTHO05D008052 4.4e-76 289.3 311 49.2
A09p05350 Brassica napus HOM05D006315 ORTHO05D008052 5.7e-76 288.9 298 49.3
BraA09t36173Z Brassica rapa HOM05D006315 ORTHO05D008052 5.7e-76 288.9 298 49.3
CiPaw.07G017800 Carya illinoinensis HOM05D006315 ORTHO05D008052 5.7e-76 288.9 369 46.3
DCAR_022164 Daucus carota HOM05D006315 ORTHO05D008052 5.7e-76 288.9 316 49.4
VMungo0720G2927 Vigna mungo HOM05D006315 ORTHO05D008052 7.5e-76 288.5 305 50.2
PSO675G8687 Papaver somniferum HOM05D006315 ORTHO05D008052 9.8e-76 288.1 313 47.6
Psat6g151200 Pisum sativum HOM05D006315 ORTHO05D008052 9.8e-76 288.1 268 51.9
SalBow8G0023 Salvia bowleyana HOM05D006315 ORTHO05D008052 9.8e-76 288.1 350 44.6
AT5G27560 Arabidopsis thaliana HOM05D006315 ORTHO05D008052 1.7e-75 287.3 313 49.2
Glyma.10G154300 Glycine max HOM05D006315 ORTHO05D008052 3.7e-75 286.2 305 50.2
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 3.7e-75 286.2 275 52.4
Glyma.20G234000 Glycine max HOM05D006315 ORTHO05D008052 4.9e-75 285.8 306 51.0
HanXRQChr02g0046151 Helianthus annuus HOM05D006315 ORTHO05D008052 6.3e-75 285.4 289 49.8
Medtr1g082900 Medicago truncatula HOM05D006315 ORTHO05D008052 1.1e-74 284.6 267 52.4
Cfa006589 Carpinus fangiana HOM05D006315 ORTHO05D008052 1.4e-74 284.3 371 45.6
unitig_37.g12631 Utricularia gibba HOM05D006315 ORTHO05D008052 1.8e-74 283.9 350 44.9
Cc02_g33440 Coffea canephora HOM05D006315 ORTHO05D008052 4.1e-74 282.7 321 48.0
Migut.B01035 Erythranthe guttata HOM05D006315 ORTHO05D008052 7.0e-74 282.0 268 52.2
Sc06g0003310 Simmondsia chinensis HOM05D006315 ORTHO05D008052 7.0e-74 282.0 319 48.3
FAN05G5779 Fragaria x ananassa HOM05D006315 ORTHO05D008052 9.2e-74 281.6 375 43.7
Sed0013855 Sechium edule HOM05D006315 ORTHO05D008052 1.2e-73 281.2 260 51.9
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 1.6e-73 280.8 313 47.6
arahy.Tifrunner.gnm1.ann1.9IE074 Arachis hypogaea HOM05D006315 ORTHO05D008052 1.6e-73 280.8 340 46.8
Lj5g0002172 Lotus japonicus HOM05D006315 ORTHO05D008052 1.6e-73 280.8 258 53.9
CDE06G2073 Ceratophyllum demersum HOM05D006315 ORTHO05D008052 7.8e-73 278.5 363 43.8
Ah.06g189370 Amaranthus hybridus HOM05D006315 ORTHO05D008052 8.6e-72 275.0 337 44.8
AUR62005146 Chenopodium quinoa HOM05D006315 ORTHO05D008052 1.1e-71 274.6 395 41.8
Hund07070 Selenicereus undatus HOM05D006315 ORTHO05D008052 1.5e-71 274.2 311 48.6
MELO3C004257.2 Cucumis melo HOM05D006315 ORTHO05D008052 1.9e-71 273.9 321 46.7
PSO541G4223 Papaver somniferum HOM05D006315 ORTHO05D008052 1.9e-71 273.9 306 47.1
SGA_v2.0_scaffold13G06358 Striga asiatica HOM05D006315 ORTHO05D008052 8.0e-70 268.5 254 53.1
Solyc01g098990.4 Solanum lycopersicum HOM05D006315 ORTHO05D008052 2.6e-68 263.5 233 55.8
Gohir.A11G265000 Gossypium hirsutum HOM05D006315 ORTHO05D008052 1.7e-67 260.8 237 52.7
EL10Ac4g09351 Beta vulgaris HOM05D006315 ORTHO05D008052 3.1e-61 240.0 298 45.3
SMO116G0320 Selaginella moellendorffii HOM05D006315 ORTHO05D008052 1.5e-60 237.7 226 48.7
Haze_04196 Corylus avellana HOM05D006315 ORTHO05D008052 1.7e-59 234.2 308 44.5
Atru.chr2.406 Acer truncatum HOM05D006315 ORTHO05D008052 2.1e-57 227.3 261 46.4
Zm00001eb377150 Zea mays HOM05D006315 ORTHO05D008052 7.3e-55 218.8 261 45.2
Lj5A533G15 Lonicera japonica HOM05D006315 ORTHO05D008052 1.1e-50 204.9 165 58.2
Cre17.g739550 Chlamydomonas reinhardtii HOM05D006315 ORTHO05D008052 3.2e-50 203.4 294 40.1
Nitab4.5_0000137g0320 Nicotiana tabacum HOM05D006315 ORTHO05D008052 2.7e-49 200.3 181 54.1
arahy.Tifrunner.gnm1.ann1.SMKB8G Arachis hypogaea HOM05D006315 ORTHO05D008052 3.3e-47 193.4 300 40.0
MCO15G525 Micromonas commoda HOM05D006315 ORTHO05D008052 6.0e-41 172.6 340 34.4
Eucgr.B01970 Eucalyptus grandis HOM05D006315 ORTHO05D008052 1.6e-38 164.5 196 44.4
Lj5C470G0 Lonicera japonica HOM05D006315 ORTHO05D008052 3.4e-36 156.8 125 58.4
Lj5C532G5 Lonicera japonica HOM05D006315 ORTHO05D008052 3.4e-36 156.8 125 58.4
HPP92_002878 Vanilla planifolia HOM05D006315 ORTHO05D008052 4.4e-36 156.4 130 56.9
HPP92_002820 Vanilla planifolia HOM05D006315 ORTHO05D008052 5.8e-36 156.0 199 44.7
Eucgr.B01875 Eucalyptus grandis HOM05D006315 ORTHO05D008052 9.3e-34 148.7 153 50.3
Actinidia23634 Actinidia chinensis HOM05D006315 ORTHO05D008052 4.6e-33 146.4 130 53.1
PRCOL_00006277 Prasinoderma coloniale HOM05D006315 ORTHO05D008052 7.3e-31 139.0 282 33.3
EL10As4g23462 Beta vulgaris HOM05D006315 ORTHO05D008052 1.2e-17 95.1 105 49.5
Hma1.2p1_0928F.1_g237790 Hydrangea macrophylla HOM05D006315 ORTHO05D008052 1.6e-14 84.7 118 44.1
Aa31LG11G9280 Aethionema arabicum HOM05D006315 ORTHO05D059511 1.2e-12 78.6 95 41.1
Lj5P469T8 Lonicera japonica HOM05D006315 ORTHO05D008052 4.2e-10 70.1 56 60.7
arahy.Tifrunner.gnm1.ann1.T3AGRQ Arachis hypogaea HOM05D006315 ORTHO05D008052 5.7e-07 59.7 55 50.9


User provided reference genes

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