Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.9e-39 165.2 75 100.0
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-28 129.0 74 73.0
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 1.5e-28 129.0 72 70.8
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.3e-27 125.9 72 70.8
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.8e-27 124.0 72 68.1
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.8e-27 124.0 72 68.1
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 8.2e-27 123.2 72 68.1
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 8.2e-27 123.2 72 72.2
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 8.2e-27 123.2 72 72.2
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 1.1e-26 122.9 72 66.7
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.1e-26 122.9 75 64.0
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 1.1e-26 122.9 72 65.3
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.4e-26 122.5 71 71.8
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 1.4e-26 122.5 72 70.8
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 1.8e-26 122.1 72 68.1
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 1.8e-26 122.1 75 64.0
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.8e-26 122.1 72 68.1
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 3.1e-26 121.3 72 66.7
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 4.1e-26 120.9 72 63.9
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.1e-26 120.9 74 68.9
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.1e-26 120.9 74 68.9
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 5.3e-26 120.6 72 68.1
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 5.3e-26 120.6 72 63.9
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 7.0e-26 120.2 72 68.1
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 7.0e-26 120.2 72 65.3
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 7.0e-26 120.2 71 64.8
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 7.0e-26 120.2 71 64.8
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 9.1e-26 119.8 69 71.0
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 9.1e-26 119.8 71 63.4
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 1.2e-25 119.4 72 65.3
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 1.2e-25 119.4 72 66.7
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.5e-25 119.0 72 66.7
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 1.5e-25 119.0 72 65.3
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 1.5e-25 119.0 75 65.3
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 2.6e-25 118.2 72 66.7
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 2.6e-25 118.2 72 66.7
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 2.6e-25 118.2 72 66.7
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 2.6e-25 118.2 72 66.7
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 65.3
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 65.3
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 63.9
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 4.5e-25 117.5 72 66.7
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 4.5e-25 117.5 72 65.3
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 4.5e-25 117.5 72 62.5
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 4.5e-25 117.5 72 62.5
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 4.5e-25 117.5 72 62.5
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 5.9e-25 117.1 72 65.3
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 5.9e-25 117.1 72 62.5
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 7.7e-25 116.7 71 69.0
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 7.7e-25 116.7 67 71.6
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 7.7e-25 116.7 69 69.6
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 7.7e-25 116.7 72 63.9
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 1.0e-24 116.3 71 60.6
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 1.0e-24 116.3 69 69.6
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 1.0e-24 116.3 72 65.3
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.3e-24 115.9 69 69.6
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 1.3e-24 115.9 72 62.5
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.3e-24 115.9 72 65.3
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 1.3e-24 115.9 72 63.9
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.7e-24 115.5 71 69.0
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 1.7e-24 115.5 72 68.1
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 1.7e-24 115.5 71 66.2
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 1.7e-24 115.5 71 64.8
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 2.2e-24 115.2 71 67.6
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 2.2e-24 115.2 72 63.9
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.2e-24 115.2 71 67.6
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 3.8e-24 114.4 75 62.7
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 3.8e-24 114.4 69 69.6
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 3.8e-24 114.4 69 69.6
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 5.0e-24 114.0 71 66.2
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 5.0e-24 114.0 69 65.2
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 5.0e-24 114.0 72 62.5
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 6.5e-24 113.6 71 66.2
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 6.5e-24 113.6 71 67.6
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 6.5e-24 113.6 72 66.7
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 65.3
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 65.3
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 66.7
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 66.7
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 66.7
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 66.7
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 66.7
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 65.3
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 65.3
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.4e-23 112.5 72 65.3
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.9e-23 112.1 72 63.9
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.9e-23 112.1 72 62.5
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 5.5e-23 110.5 72 65.3
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 5.5e-23 110.5 73 61.6
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 5.5e-23 110.5 71 57.7
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 7.2e-23 110.2 67 70.1
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 9.4e-23 109.8 65 66.2
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 9.4e-23 109.8 65 66.2
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 9.4e-23 109.8 62 67.7
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 1.2e-22 109.4 66 71.2
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 1.2e-22 109.4 66 71.2
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 1.2e-22 109.4 72 65.3
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 1.2e-22 109.4 66 71.2
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 1.2e-22 109.4 66 69.7
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 2.1e-22 108.6 71 62.0
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 8.0e-22 106.7 72 59.7
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 8.0e-22 106.7 72 59.7
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.8e-21 105.5 72 63.9
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.0e-21 104.8 72 58.3
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 5.2e-21 104.0 72 56.9
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 5.2e-21 104.0 72 56.9
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 5.2e-21 104.0 72 56.9
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 6.7e-21 103.6 67 61.2
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 8.8e-21 103.2 64 70.3
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 8.8e-21 103.2 72 58.3
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.1e-20 102.8 72 56.9
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-20 102.4 72 56.9
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 1.3e-19 99.4 60 65.0
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 3.7e-19 97.8 72 58.3
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 3.7e-19 97.8 69 55.1
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 6.3e-19 97.1 69 53.6
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 8.2e-19 96.7 59 64.4
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 8.2e-19 96.7 62 64.5
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.2e-16 88.6 49 63.3
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.2e-15 83.6 48 60.4
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 9.4e-15 83.2 58 56.9
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 5.9e-09 63.9 69 42.0
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.3e-08 62.8 71 39.4
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 6.1e-06 53.9 69 37.7


User provided reference genes

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