Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 5.9e-41 170.2 75 100.0
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 6.3e-27 123.6 75 64.0
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.4e-26 122.5 72 70.8
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.4e-26 122.5 74 67.6
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 1.8e-26 122.1 72 70.8
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 3.1e-26 121.3 75 69.3
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 4.1e-26 120.9 72 72.2
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 4.1e-26 120.9 72 72.2
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 5.3e-26 120.6 72 72.2
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 7.0e-26 120.2 71 70.4
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 7.0e-26 120.2 72 72.2
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.2e-25 119.4 72 70.8
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.2e-25 119.4 72 70.8
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 1.5e-25 119.0 72 72.2
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 1.5e-25 119.0 72 73.6
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-25 119.0 74 66.2
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-25 119.0 74 66.2
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.5e-25 119.0 72 73.6
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 1.5e-25 119.0 72 73.6
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 1.5e-25 119.0 75 66.7
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 2.0e-25 118.6 72 70.8
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.0e-25 118.6 72 69.4
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 69.4
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 72.2
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 3.5e-25 117.9 71 70.4
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 70.8
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 5.9e-25 117.1 71 70.4
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 5.9e-25 117.1 72 69.4
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 7.7e-25 116.7 72 70.8
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 7.7e-25 116.7 72 70.8
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 7.7e-25 116.7 72 70.8
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 1.0e-24 116.3 72 68.1
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 1.7e-24 115.5 72 68.1
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 1.7e-24 115.5 71 70.4
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.2e-24 115.2 72 66.7
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 2.2e-24 115.2 72 68.1
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 2.9e-24 114.8 69 71.0
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 3.8e-24 114.4 71 69.0
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 3.8e-24 114.4 71 66.2
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 3.8e-24 114.4 72 69.4
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 3.8e-24 114.4 72 69.4
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 5.0e-24 114.0 72 69.4
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 5.0e-24 114.0 71 67.6
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 6.5e-24 113.6 72 66.7
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 6.5e-24 113.6 72 68.1
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 6.5e-24 113.6 72 63.9
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 8.5e-24 113.2 71 66.2
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 66.7
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 8.5e-24 113.2 75 65.3
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 63.9
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 8.5e-24 113.2 72 63.9
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.4e-23 112.5 71 64.8
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 1.4e-23 112.5 72 65.3
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 1.9e-23 112.1 72 66.7
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 1.9e-23 112.1 72 66.7
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 1.9e-23 112.1 72 66.7
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 2.5e-23 111.7 72 66.7
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 2.5e-23 111.7 72 66.7
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 3.2e-23 111.3 71 64.8
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 4.2e-23 110.9 71 63.4
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 4.2e-23 110.9 72 63.9
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 4.2e-23 110.9 71 63.4
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 4.2e-23 110.9 72 65.3
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 5.5e-23 110.5 69 68.1
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 5.5e-23 110.5 69 68.1
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 7.2e-23 110.2 71 63.4
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 7.2e-23 110.2 72 62.5
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 7.2e-23 110.2 69 68.1
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 7.2e-23 110.2 72 65.3
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 7.2e-23 110.2 72 65.3
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 7.2e-23 110.2 72 65.3
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 9.4e-23 109.8 71 62.0
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 1.2e-22 109.4 72 68.1
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 1.6e-22 109.0 64 71.9
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.6e-22 109.0 72 65.3
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.7e-22 108.2 72 61.1
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.7e-22 108.2 69 66.7
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.7e-22 108.2 72 61.1
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 6.1e-22 107.1 72 65.3
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 6.1e-22 107.1 72 65.3
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 6.1e-22 107.1 72 65.3
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 6.1e-22 107.1 72 65.3
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 8.0e-22 106.7 72 65.3
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 8.0e-22 106.7 72 59.7
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 8.0e-22 106.7 72 59.7
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 8.0e-22 106.7 71 64.8
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 8.0e-22 106.7 72 65.3
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 8.0e-22 106.7 72 62.5
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 1.0e-21 106.3 72 65.3
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 1.0e-21 106.3 72 65.3
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 1.0e-21 106.3 72 65.3
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 1.0e-21 106.3 72 65.3
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 1.0e-21 106.3 72 65.3
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.0e-21 106.3 72 58.3
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 1.8e-21 105.5 67 64.2
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 3.0e-21 104.8 66 65.2
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 3.0e-21 104.8 66 65.2
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 3.0e-21 104.8 66 65.2
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 3.0e-21 104.8 73 63.0
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.0e-21 104.8 72 58.3
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 5.2e-21 104.0 66 68.2
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 6.7e-21 103.6 72 63.9
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.8e-21 103.2 62 71.0
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 1.5e-20 102.4 72 63.9
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 1.5e-20 102.4 65 61.5
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 1.5e-20 102.4 65 61.5
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 1.5e-20 102.4 69 60.9
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 1.5e-20 102.4 69 60.9
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 1.7e-19 99.0 60 68.3
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 1.7e-19 99.0 66 66.7
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.8e-19 98.2 72 62.5
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 4.8e-19 97.4 71 52.1
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 4.8e-19 97.4 66 68.2
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 8.2e-19 96.7 61 67.2
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.1e-18 96.3 69 56.5
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 9.1e-18 93.2 69 53.6
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.0e-17 92.0 72 56.9
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.9e-16 88.2 55 67.3
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.1e-15 86.3 61 57.4
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 2.5e-15 85.1 57 66.7
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.7e-14 80.9 48 70.8
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 3.8e-08 61.2 71 40.8
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 5.0e-08 60.8 69 44.9


User provided reference genes

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