Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0046s0003 Marchantia polymorpha HOM05D004396 ORTHO05D005272 1.8e-57 225.7 117 100.0
SEGI_22391 Sequoiadendron giganteum HOM05D004396 ORTHO05D005272 1.1e-46 189.9 112 83.9
Pp3c2_30990 Physcomitrium patens HOM05D004396 ORTHO05D005272 2.1e-45 185.7 112 81.2
Cc08_g03470 Coffea canephora HOM05D004396 ORTHO05D005272 3.6e-45 184.9 117 77.8
Aqoxy7G03666 Aquilegia oxysepala HOM05D004396 ORTHO05D005272 1.0e-44 183.3 112 79.5
SMO117G0136 Selaginella moellendorffii HOM05D004396 ORTHO05D005272 1.4e-44 183.0 110 82.7
Actinidia14779 Actinidia chinensis HOM05D004396 ORTHO05D005272 1.8e-44 182.6 117 77.8
Haze_08163 Corylus avellana HOM05D004396 ORTHO05D005272 1.8e-44 182.6 112 79.5
Dinv25260 Davidia involucrata HOM05D004396 ORTHO05D005272 2.3e-44 182.2 117 76.9
Actinidia18135 Actinidia chinensis HOM05D004396 ORTHO05D005272 3.0e-44 181.8 117 76.9
CSS0013599 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 3.0e-44 181.8 117 76.9
CSS0046263 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 3.0e-44 181.8 117 76.9
Nn3g19387 Nelumbo nucifera HOM05D004396 ORTHO05D005272 3.0e-44 181.8 112 79.5
vmacro00278 Vaccinium macrocarpon HOM05D004396 ORTHO05D005272 3.0e-44 181.8 117 77.8
HanXRQChr06g0172781 Helianthus annuus HOM05D004396 ORTHO05D005272 4.0e-44 181.4 112 80.4
ECA240G0094 Erigeron canadensis HOM05D004396 ORTHO05D005272 5.2e-44 181.0 112 80.4
Peaxi162Scf00170g00812 Petunia axillaris HOM05D004396 ORTHO05D005272 5.2e-44 181.0 117 76.9
CSS0033679 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 6.8e-44 180.6 117 76.9
Potri.003G096800 Populus trichocarpa HOM05D004396 ORTHO05D005272 6.8e-44 180.6 112 79.5
Gorai.003G185400 Gossypium raimondii HOM05D004396 ORTHO05D005272 8.8e-44 180.3 112 81.2
SGA_v2.0_scaffold36G14295 Striga asiatica HOM05D004396 ORTHO05D005272 8.8e-44 180.3 112 78.6
TWI81G0111 Tripterygium wilfordii HOM05D004396 ORTHO05D005272 8.8e-44 180.3 112 78.6
HPP92_025493 Vanilla planifolia HOM05D004396 ORTHO05D005272 8.8e-44 180.3 111 80.2
GSVIVG01013064001 Vitis vinifera HOM05D004396 ORTHO05D005272 8.8e-44 180.3 112 78.6
Carub.0001s3054 Capsella rubella HOM05D004396 ORTHO05D005272 1.2e-43 179.9 112 80.4
Hma1.2p1_0870F.1_g230890 Hydrangea macrophylla HOM05D004396 ORTHO05D005272 1.2e-43 179.9 117 76.1
Prupe.4G286900 Prunus persica HOM05D004396 ORTHO05D005272 1.2e-43 179.9 112 80.4
CAN.G726.24 Capsicum annuum HOM05D004396 ORTHO05D005272 1.5e-43 179.5 117 76.1
DCAR_008222 Daucus carota HOM05D004396 ORTHO05D005272 1.5e-43 179.5 112 78.6
HanXRQChr13g0414241 Helianthus annuus HOM05D004396 ORTHO05D005272 1.5e-43 179.5 112 79.5
Lsat_1_v5_gn_3_19181 Lactuca sativa HOM05D004396 ORTHO05D005272 1.5e-43 179.5 112 79.5
Manes.12G090054 Manihot esculenta HOM05D004396 ORTHO05D005272 1.5e-43 179.5 112 79.5
Solyc08g076460.3 Solanum lycopersicum HOM05D004396 ORTHO05D005272 1.5e-43 179.5 117 76.1
Sopen08g025040 Solanum pennellii HOM05D004396 ORTHO05D005272 1.5e-43 179.5 117 76.1
PGSC0003DMG400014795 Solanum tuberosum HOM05D004396 ORTHO05D005272 1.5e-43 179.5 117 76.1
ATR0626G058 Amborella trichopoda HOM05D004396 ORTHO05D005272 2.0e-43 179.1 116 75.0
MSTRG.12178 Avicennia marina HOM05D004396 ORTHO05D005272 2.0e-43 179.1 112 77.7
ClCG10G001270 Citrullus lanatus HOM05D004396 ORTHO05D005272 2.0e-43 179.1 112 78.6
Oeu027093.1 Olea europaea HOM05D004396 ORTHO05D005272 2.0e-43 179.1 112 77.7
Rhsim11G0021700 Rhododendron simsii HOM05D004396 ORTHO05D005272 2.0e-43 179.1 117 76.1
Nitab4.5_0000556g0250 Nicotiana tabacum HOM05D004396 ORTHO05D005272 2.6e-43 178.7 117 75.2
Nitab4.5_0004528g0030 Nicotiana tabacum HOM05D004396 ORTHO05D005272 2.6e-43 178.7 117 75.2
PGR031G0362 Punica granatum HOM05D004396 ORTHO05D005272 2.6e-43 178.7 112 78.6
PGR031G2119 Punica granatum HOM05D004396 ORTHO05D005272 2.6e-43 178.7 112 78.6
QL12p001650 Quercus lobata HOM05D004396 ORTHO05D005272 2.6e-43 178.7 111 77.5
THA.LOC104798491 Tarenaya hassleriana HOM05D004396 ORTHO05D005272 2.6e-43 178.7 112 79.5
TWI60G0023 Tripterygium wilfordii HOM05D004396 ORTHO05D005272 2.6e-43 178.7 112 76.8
AL1G46340 Arabidopsis lyrata HOM05D004396 ORTHO05D005272 3.4e-43 178.3 112 78.6
CARHR031580 Cardamine hirsuta HOM05D004396 ORTHO05D005272 3.4e-43 178.3 112 78.6
CDE08G0196 Ceratophyllum demersum HOM05D004396 ORTHO05D005272 3.4e-43 178.3 117 75.2
ECA240G0984 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.4e-43 178.3 112 79.5
Thhalv10009144m.g Eutrema salsugineum HOM05D004396 ORTHO05D005272 3.4e-43 178.3 112 78.6
Manes.04G055632 Manihot esculenta HOM05D004396 ORTHO05D005272 3.4e-43 178.3 112 78.6
Nitab4.5_0000529g0110 Nicotiana tabacum HOM05D004396 ORTHO05D005272 3.4e-43 178.3 117 74.4
THA.LOC104814414 Tarenaya hassleriana HOM05D004396 ORTHO05D005272 3.4e-43 178.3 112 80.4
Thecc.03G310300 Theobroma cacao HOM05D004396 ORTHO05D005272 3.4e-43 178.3 117 76.9
HPP92_025445 Vanilla planifolia HOM05D004396 ORTHO05D005272 3.4e-43 178.3 111 79.3
PSO541G6011 Papaver somniferum HOM05D004396 ORTHO05D005272 4.4e-43 177.9 116 76.7
SGA_v2.0_scaffold198G41072 Striga asiatica HOM05D004396 ORTHO05D005272 4.4e-43 177.9 112 78.6
Eucgr.H00688 Eucalyptus grandis HOM05D004396 ORTHO05D005272 5.7e-43 177.6 112 77.7
PSO339G1317 Papaver somniferum HOM05D004396 ORTHO05D005272 5.7e-43 177.6 112 78.6
PSO384G3027 Papaver somniferum HOM05D004396 ORTHO05D005272 5.7e-43 177.6 112 78.6
Duzib084G0048 Durio zibethinus HOM05D004396 ORTHO05D005272 7.5e-43 177.2 110 79.1
Os04g0397000 Oryza sativa ssp. japonica HOM05D004396 ORTHO05D005272 7.5e-43 177.2 110 77.3
PSO675G8737 Papaver somniferum HOM05D004396 ORTHO05D005272 7.5e-43 177.2 116 77.6
PGSC0003DMG400018505 Solanum tuberosum HOM05D004396 ORTHO05D005272 7.5e-43 177.2 117 74.4
Zm00001eb379050 Zea mays HOM05D004396 ORTHO05D005272 7.5e-43 177.2 110 78.2
AT1G32210 Arabidopsis thaliana HOM05D004396 ORTHO05D005272 9.8e-43 176.8 112 77.7
BcaB07g32895 Brassica carinata HOM05D004396 ORTHO05D005272 9.8e-43 176.8 112 78.6
BraA09t38945Z Brassica rapa HOM05D004396 ORTHO05D005272 9.8e-43 176.8 112 78.6
Ca_25178_v3 Cicer arietinum L. HOM05D004396 ORTHO05D005272 9.8e-43 176.8 112 79.5
Ciclev10002883m.g Citrus clementina HOM05D004396 ORTHO05D005272 9.8e-43 176.8 112 78.6
Duzib205G0471 Durio zibethinus HOM05D004396 ORTHO05D005272 9.8e-43 176.8 109 80.7
arahy.Tifrunner.gnm1.ann1.Z3U2VZ Arachis hypogaea HOM05D004396 ORTHO05D005272 1.3e-42 176.4 112 78.6
BcaB03g13752 Brassica carinata HOM05D004396 ORTHO05D005272 1.3e-42 176.4 112 77.7
BcaB04g17995 Brassica carinata HOM05D004396 ORTHO05D005272 1.3e-42 176.4 112 77.7
MD10G1005100 Malus domestica HOM05D004396 ORTHO05D005272 1.3e-42 176.4 116 77.6
Medtr3g023120 Medicago truncatula HOM05D004396 ORTHO05D005272 1.3e-42 176.4 112 78.6
Sp1g27890 Schrenkiella parvula HOM05D004396 ORTHO05D005272 1.3e-42 176.4 112 77.7
Hund10776 Selenicereus undatus HOM05D004396 ORTHO05D005272 1.3e-42 176.4 112 76.8
BcaC05g27252 Brassica carinata HOM05D004396 ORTHO05D005272 1.7e-42 176.0 112 77.7
C05p31610 Brassica napus HOM05D004396 ORTHO05D005272 1.7e-42 176.0 112 77.7
CsaV3_3G001340 Cucumis sativus L. HOM05D004396 ORTHO05D005272 1.7e-42 176.0 112 77.7
Hma1.2p1_0890F.1_g233090 Hydrangea macrophylla HOM05D004396 ORTHO05D005272 1.7e-42 176.0 117 74.4
Lalb_Chr05g0215751 Lupinus albus HOM05D004396 ORTHO05D005272 1.7e-42 176.0 112 78.6
Prupe.8G007900 Prunus persica HOM05D004396 ORTHO05D005272 1.7e-42 176.0 112 78.6
unitig_899.g15442 Utricularia gibba HOM05D004396 ORTHO05D005272 1.7e-42 176.0 118 76.3
CARHR129690 Cardamine hirsuta HOM05D004396 ORTHO05D005272 2.2e-42 175.6 112 77.7
Thhalv10017441m.g Eutrema salsugineum HOM05D004396 ORTHO05D005272 2.2e-42 175.6 112 76.8
Sabra03G0065300 Salix brachista HOM05D004396 ORTHO05D005272 2.2e-42 175.6 112 77.7
A05p25120 Brassica napus HOM05D004396 ORTHO05D005272 2.8e-42 175.3 112 76.8
BraA05t21392Z Brassica rapa HOM05D004396 ORTHO05D005272 2.8e-42 175.3 112 76.8
Gohir.A12G206100 Gossypium hirsutum HOM05D004396 ORTHO05D005272 2.8e-42 175.3 109 80.7
Gohir.D12G208400 Gossypium hirsutum HOM05D004396 ORTHO05D005272 2.8e-42 175.3 109 80.7
Gorai.008G224000 Gossypium raimondii HOM05D004396 ORTHO05D005272 2.8e-42 175.3 109 80.7
AL4G31570 Arabidopsis lyrata HOM05D004396 ORTHO05D005272 3.7e-42 174.9 117 75.2
COL.COLO4_16940 Corchorus olitorius HOM05D004396 ORTHO05D005272 3.7e-42 174.9 117 75.2
TAR375G0183 Trochodendron aralioides HOM05D004396 ORTHO05D005272 3.7e-42 174.9 112 76.8
AT2G35520 Arabidopsis thaliana HOM05D004396 ORTHO05D005272 4.8e-42 174.5 112 76.8
Potri.001G136800 Populus trichocarpa HOM05D004396 ORTHO05D005272 4.8e-42 174.5 115 75.7
RcHm_v2.0_Chr6g0251281 Rosa chinensis HOM05D004396 ORTHO05D005272 4.8e-42 174.5 116 75.9
Sc01g0005580 Simmondsia chinensis HOM05D004396 ORTHO05D005272 4.8e-42 174.5 112 76.8
FAN24G1987 Fragaria x ananassa HOM05D004396 ORTHO05D005272 6.3e-42 174.1 116 75.0
Lalb_Chr16g0381071 Lupinus albus HOM05D004396 ORTHO05D005272 6.3e-42 174.1 112 76.8
MD05G1007700 Malus domestica HOM05D004396 ORTHO05D005272 6.3e-42 174.1 112 77.7
Rhsim07G0132100 Rhododendron simsii HOM05D004396 ORTHO05D005272 6.3e-42 174.1 117 75.2
Carub.0004s1721 Capsella rubella HOM05D004396 ORTHO05D005272 8.3e-42 173.7 112 75.0
FAN20G1930 Fragaria x ananassa HOM05D004396 ORTHO05D005272 8.3e-42 173.7 116 75.0
FAN27G1914 Fragaria x ananassa HOM05D004396 ORTHO05D005272 8.3e-42 173.7 116 75.0
CiPaw.11G098400 Carya illinoinensis HOM05D004396 ORTHO05D005272 1.4e-41 172.9 112 75.9
Ca_27048_v3 Cicer arietinum L. HOM05D004396 ORTHO05D005272 1.4e-41 172.9 117 75.2
SalBow1G7612 Salvia bowleyana HOM05D004396 ORTHO05D005272 1.4e-41 172.9 117 74.4
Dinv29003 Davidia involucrata HOM05D004396 ORTHO05D005272 1.8e-41 172.6 117 74.4
FvH4_2g00930 Fragaria vesca HOM05D004396 ORTHO05D005272 1.8e-41 172.6 109 78.9
TPR.G19425 Trifolium pratense HOM05D004396 ORTHO05D005272 1.8e-41 172.6 109 79.8
Phvul.002G136700 Phaseolus vulgaris HOM05D004396 ORTHO05D005272 2.4e-41 172.2 112 75.9
Medtr5g029240 Medicago truncatula HOM05D004396 ORTHO05D005272 3.1e-41 171.8 109 79.8
Glyma.09G207800 Glycine max HOM05D004396 ORTHO05D005272 7.0e-41 170.6 109 77.1
Lj2g0004535 Lotus japonicus HOM05D004396 ORTHO05D005272 7.0e-41 170.6 112 75.0
Migut.A01174 Erythranthe guttata HOM05D004396 ORTHO05D005272 9.1e-41 170.2 112 74.1
VMungo1215G3227 Vigna mungo HOM05D004396 ORTHO05D005272 1.2e-40 169.9 117 74.4
Psat5g213400 Pisum sativum HOM05D004396 ORTHO05D005272 2.7e-40 168.7 112 75.0
AagrBONN_evm.TU.Sc2ySwM_362.1218 Anthoceros agrestis HOM05D000444 ORTHO05D000489 5.9e-40 167.5 106 77.4
TPR.G31993 Trifolium pratense HOM05D004396 ORTHO05D005272 5.9e-40 167.5 112 75.0
Lsat_1_v5_gn_6_80060 Lactuca sativa HOM05D004396 ORTHO05D005272 2.3e-39 165.6 104 77.9
Glyma.14G201900 Glycine max HOM05D004396 ORTHO05D005272 5.0e-39 164.5 113 72.6
Lj4g0004552 Lotus japonicus HOM05D004396 ORTHO05D005272 5.0e-39 164.5 112 70.5
Cpa.g.sc42.149 Carica papaya HOM05D004396 ORTHO05D005272 1.5e-38 162.9 104 76.9
Sabra01G0105900 Salix brachista HOM05D004396 ORTHO05D005272 1.5e-38 162.9 125 68.8
EL10Ac5g11811 Beta vulgaris HOM05D004396 ORTHO05D005272 9.5e-38 160.2 148 59.5
Gohir.A03G000033 Gossypium hirsutum HOM05D004396 ORTHO05D005272 1.4e-36 156.4 105 76.2
Peaxi162Scf00045g00321 Petunia axillaris HOM05D004396 ORTHO05D005272 2.6e-35 152.1 89 79.8
Migut.E00744 Erythranthe guttata HOM05D004396 ORTHO05D005272 5.7e-35 151.0 88 81.8
Gohir.D03G176200 Gossypium hirsutum HOM05D004396 ORTHO05D005272 2.0e-32 142.5 116 69.0
BolC3t13671H Brassica oleracea HOM05D004396 ORTHO05D005272 1.7e-31 139.4 196 44.4
Cfa012506 Carpinus fangiana HOM05D004396 ORTHO05D005272 1.5e-30 136.3 73 89.0
MBI02_g15155_MAGBIO Magnolia biondii HOM05D004396 ORTHO05D005272 7.3e-30 134.0 72 86.1
CAN.G1987.1 Capsicum annuum HOM05D004396 ORTHO05D005272 2.1e-29 132.5 73 87.7
Cre02.g108400 Chlamydomonas reinhardtii HOM05D004396 ORTHO05D005272 1.0e-28 130.2 105 60.0
Psat2g139040 Pisum sativum HOM05D004396 ORTHO05D005272 5.2e-28 127.9 67 91.0
AUR62036328 Chenopodium quinoa HOM05D004396 ORTHO05D005272 8.9e-28 127.1 105 63.8
arahy.Tifrunner.gnm1.ann1.KG0UNZ Arachis hypogaea HOM05D004396 ORTHO05D005272 1.5e-27 126.3 85 74.1
BolC5t31884H Brassica oleracea HOM05D004396 ORTHO05D005272 2.6e-27 125.6 84 73.8
CBR_g15971 Chara braunii HOM05D004396 ORTHO05D005272 3.4e-27 125.2 113 55.8
CiPaw.12G068300 Carya illinoinensis HOM05D004396 ORTHO05D005272 9.8e-27 123.6 85 69.4
Sed0012676 Sechium edule HOM05D004396 ORTHO05D005272 1.7e-26 122.9 84 71.4
A08p09310 Brassica napus HOM05D004396 ORTHO05D005272 4.9e-26 121.3 102 61.8
BraA08t32929Z Brassica rapa HOM05D004396 ORTHO05D005272 4.9e-26 121.3 102 61.8
Ciclev10013120m.g Citrus clementina HOM05D004396 ORTHO05D005272 4.1e-25 118.2 98 62.2
Nn1g00212 Nelumbo nucifera HOM05D004396 ORTHO05D005272 1.0e-23 113.6 81 67.9
Pp3c1_6120 Physcomitrium patens HOM05D004396 ORTHO05D005272 3.1e-20 102.1 74 70.3
Aa31LG2G13800 Aethionema arabicum HOM05D004396 ORTHO05D005272 1.2e-19 100.1 79 65.8
Ah.02g116090 Amaranthus hybridus HOM05D002241 ORTHO05D002458 2.9e-18 95.5 69 69.6
Sc24g0004110 Simmondsia chinensis HOM05D004396 ORTHO05D005272 3.7e-18 95.1 69 69.6
FAN15G2154 Fragaria x ananassa HOM05D004396 ORTHO05D005272 3.2e-17 92.0 73 64.4
Atru.chr6.1524 Acer truncatum HOM05D004396 ORTHO05D005272 2.1e-16 89.4 82 58.5
BolC8t47998H Brassica oleracea HOM05D004396 ORTHO05D005272 2.7e-16 89.0 104 51.9
Hund15006 Selenicereus undatus HOM05D004396 ORTHO05D005272 2.1e-13 79.3 51 78.4


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