Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 5.2e-268 927.2 473 100.0
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 4.0e-151 538.9 403 67.5
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 3.2e-145 519.2 338 72.8
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 6.1e-144 515.0 356 69.7
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.4e-143 513.8 335 72.5
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 3.0e-143 512.7 363 69.1
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 5.2e-143 511.9 358 70.1
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 5.2e-143 511.9 329 74.8
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 6.8e-143 511.5 363 68.6
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 6.8e-143 511.5 358 70.4
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 6.8e-143 511.5 359 69.4
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 6.8e-143 511.5 335 73.1
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 8.8e-143 511.1 362 68.5
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 1.2e-142 510.8 338 71.9
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 1.5e-142 510.4 353 70.0
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 2.0e-142 510.0 353 69.4
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 2.6e-142 509.6 383 67.1
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 2.6e-142 509.6 362 68.8
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 2.6e-142 509.6 327 74.6
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 3.4e-142 509.2 353 69.1
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 4.4e-142 508.8 338 71.3
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 4.4e-142 508.8 357 69.5
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 5.7e-142 508.4 338 72.5
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 5.7e-142 508.4 354 69.5
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 7.5e-142 508.1 352 71.6
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 7.5e-142 508.1 357 70.0
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 9.8e-142 507.7 335 71.6
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 9.8e-142 507.7 334 71.9
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.3e-141 507.3 377 65.3
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 1.3e-141 507.3 384 66.4
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.7e-141 506.9 352 70.2
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 1.7e-141 506.9 370 67.8
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.7e-141 506.9 366 67.5
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 1.7e-141 506.9 338 71.0
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 1.7e-141 506.9 340 71.5
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 1.7e-141 506.9 330 73.0
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 2.2e-141 506.5 353 68.8
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 2.2e-141 506.5 340 71.5
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 2.8e-141 506.1 359 69.6
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 3.7e-141 505.8 344 70.6
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 3.7e-141 505.8 355 67.6
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 4.8e-141 505.4 356 68.8
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 6.3e-141 505.0 334 71.6
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 6.3e-141 505.0 338 71.3
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 8.3e-141 504.6 330 72.1
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 8.3e-141 504.6 377 65.3
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 8.3e-141 504.6 340 70.9
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 8.3e-141 504.6 360 68.9
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 1.1e-140 504.2 338 70.4
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.1e-140 504.2 392 66.1
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.4e-140 503.8 337 71.8
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 1.4e-140 503.8 339 70.8
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 1.4e-140 503.8 335 71.9
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 1.8e-140 503.4 356 69.7
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 1.8e-140 503.4 330 72.4
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.8e-140 503.4 334 71.3
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.8e-140 503.4 355 68.5
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 2.4e-140 503.1 376 65.4
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 2.4e-140 503.1 360 69.2
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 3.1e-140 502.7 335 71.0
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 3.1e-140 502.7 394 64.7
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 3.1e-140 502.7 330 72.7
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 4.1e-140 502.3 350 68.9
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 4.1e-140 502.3 334 72.2
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 4.1e-140 502.3 352 68.5
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 7.0e-140 501.5 334 71.0
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 7.0e-140 501.5 366 67.5
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 9.1e-140 501.1 369 66.7
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 9.1e-140 501.1 377 65.0
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.2e-139 500.7 337 72.1
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.2e-139 500.7 379 64.1
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 1.6e-139 500.4 330 73.0
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.6e-139 500.4 330 72.1
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 1.6e-139 500.4 356 69.7
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 1.6e-139 500.4 330 71.5
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 1.6e-139 500.4 352 68.5
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 2.0e-139 500.0 344 70.3
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 4.5e-139 498.8 330 73.9
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 4.5e-139 498.8 374 66.3
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 7.7e-139 498.0 337 71.8
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.0e-138 497.7 349 69.9
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.0e-138 497.7 337 72.1
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.7e-138 496.9 358 68.2
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 1.7e-138 496.9 356 67.4
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.7e-138 496.9 365 67.1
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 2.9e-138 496.1 330 73.0
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 2.9e-138 496.1 357 68.9
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 3.8e-138 495.7 335 71.0
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 5.0e-138 495.4 330 73.3
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 6.5e-138 495.0 335 71.0
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 4.2e-137 492.3 327 72.2
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.2e-136 490.7 335 70.7
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 2.8e-136 489.6 318 72.3
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 3.6e-136 489.2 334 70.7
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 4.7e-136 488.8 335 69.6
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.8e-135 486.9 351 67.8
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 3.0e-135 486.1 330 70.9
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.4e-132 477.2 330 70.0
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 1.8e-132 476.9 363 64.5
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 1.2e-131 474.2 359 66.9
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 3.8e-130 469.2 394 60.4
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 8.0e-128 461.5 343 66.2
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 6.8e-127 458.4 335 68.1
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 3.4e-126 456.1 335 67.2
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 1.7e-117 427.2 362 59.7
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.2e-112 411.0 330 62.7
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.4e-111 407.5 327 63.6
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 1.1e-108 397.9 376 56.1
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 4.3e-105 386.0 357 56.6
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 3.6e-104 382.9 363 56.5
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 4.7e-104 382.5 335 59.1
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.1e-103 381.3 337 56.1
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 8.7e-98 361.7 369 51.2
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 4.3e-89 332.8 243 67.1
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 1.1e-87 328.2 233 67.8
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.1e-87 328.2 217 70.5
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 1.8e-87 327.4 242 66.1
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 3.2e-84 316.6 212 71.2
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 9.0e-63 245.4 287 44.9
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 6.1e-59 232.6 182 62.6
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.6e-51 208.0 178 57.3
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.4e-50 204.9 165 61.2
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 6.5e-37 159.5 131 61.8
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 1.1e-36 158.7 155 51.6
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 2.0e-09 68.2 90 45.6
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 2.0e-09 68.2 90 45.6
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 4.4e-09 67.0 55 60.0


User provided reference genes

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