Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0045s0139 Marchantia polymorpha HOM05D007671 ORTHO05D009777 6.5e-54 213.8 106 100.0
Mapoly3284s0001 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.5e-18 96.3 55 87.3
Mapoly0010s0188 Marchantia polymorpha HOM05D007671 ORTHO05D009777 5.1e-14 81.3 43 93.0
Mapoly0170s0037 Marchantia polymorpha HOM05D007671 ORTHO05D009777 5.1e-14 81.3 43 93.0
Pp3c12_8280 Physcomitrium patens HOM05D007671 ORTHO05D009777 2.1e-12 75.9 109 47.7
Pp3c12_8281 Physcomitrium patens HOM05D007671 ORTHO05D009777 2.1e-12 75.9 109 47.7
Pp3c12_8290 Physcomitrium patens HOM05D007671 ORTHO05D009777 2.1e-12 75.9 109 47.7
Mapoly0041s0016 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.8e-12 75.5 43 86.0
Mapoly0012s0007 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.1e-11 73.6 37 100.0
Mapoly0130s0018 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.1e-11 73.6 38 97.4
Mapoly0168s0020 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.1e-11 73.6 37 100.0
Pp3c23_15500 Physcomitrium patens HOM05D007671 ORTHO05D009777 1.1e-11 73.6 48 83.3
Mapoly0025s0123 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.3e-11 72.4 38 94.7
Mapoly0047s0081 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.3e-11 72.4 37 97.3
Mapoly0124s0032 Marchantia polymorpha HOM05D007671 ORTHO05D009777 3.1e-11 72.0 36 100.0
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 5.2e-11 71.2 70 61.4
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 4.4e-10 68.2 66 59.1
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 2.2e-09 65.9 66 62.1
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 4.9e-09 64.7 63 61.9
Migut.N01038 Erythranthe guttata HOM05D007671 ORTHO05D009777 6.4e-09 64.3 59 62.7
Migut.N02391 Erythranthe guttata HOM05D007671 ORTHO05D009777 8.4e-09 63.9 46 78.3
Manes.01G151801 Manihot esculenta HOM05D007671 ORTHO05D009777 1.9e-08 62.8 42 81.0
Migut.E00372 Erythranthe guttata HOM05D007671 ORTHO05D009777 2.4e-08 62.4 68 58.8
Prupe.1G136100 Prunus persica HOM05D007671 ORTHO05D009777 2.4e-08 62.4 43 79.1
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 4.1e-08 61.6 63 60.3
Thhalv10009901m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 5.4e-08 61.2 62 61.3
Gohir.1Z049332 Gossypium hirsutum HOM05D007671 ORTHO05D009777 7.1e-08 60.8 38 81.6
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.2e-07 60.1 65 58.5
Carub.0005s0319 Capsella rubella HOM05D007671 ORTHO05D009777 1.6e-07 59.7 62 61.3
Gohir.D02G056933 Gossypium hirsutum HOM05D007671 ORTHO05D009777 6.0e-07 57.8 76 52.6
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 6.0e-07 57.8 39 79.5
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 7.8e-07 57.4 41 73.2
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 7.8e-07 57.4 63 57.1
FAN24G3042 Fragaria x ananassa HOM05D007671 ORTHO05D009777 1.0e-06 57.0 36 83.3
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.0e-06 57.0 35 85.7
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.0e-06 57.0 62 58.1
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.0e-06 57.0 62 58.1
Glyma.10G232100 Glycine max HOM05D007671 ORTHO05D009777 1.3e-06 56.6 38 76.3
Gohir.D02G057184 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.7e-06 56.2 35 82.9
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.7e-06 56.2 77 49.4
Gohir.A08G235950 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.3e-06 55.8 35 82.9
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.3e-06 55.8 38 76.3
Gohir.D08G256350 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.3e-06 55.8 35 82.9
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 2.3e-06 55.8 77 49.4
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 2.3e-06 55.8 77 49.4
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 3.0e-06 55.5 35 82.9
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 3.9e-06 55.1 62 58.1
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 5.1e-06 54.7 62 56.5
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 6.6e-06 54.3 74 50.0


User provided reference genes

Program Settings