Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 0.0e+00 1223.4 617 100.0
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 3.3e-150 536.2 625 46.4
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 2.5e-129 466.8 598 44.3
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 1.7e-122 444.1 609 39.9
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 8.6e-122 441.8 614 40.7
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 1.1e-121 441.4 612 41.8
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 1.9e-121 440.7 615 39.2
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 2.8e-120 436.8 609 41.5
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 4.0e-119 433.0 611 39.9
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 8.9e-119 431.8 613 41.1
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 5.8e-118 429.1 611 38.6
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 1.3e-117 427.9 611 39.0
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 1.3e-117 427.9 610 39.7
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 6.4e-117 425.6 618 40.9
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 8.3e-117 425.2 609 42.2
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 1.1e-116 424.9 618 38.5
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 1.9e-116 424.1 608 39.1
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 2.4e-116 423.7 612 38.9
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 2.4e-116 423.7 610 39.5
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 2.4e-116 423.7 610 39.5
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 4.1e-116 422.9 611 38.1
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 1.2e-115 421.4 610 40.0
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 6.0e-115 419.1 612 38.4
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 6.0e-115 419.1 607 38.7
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 7.8e-115 418.7 614 39.4
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 3.0e-114 416.8 614 39.9
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 3.0e-114 416.8 608 39.5
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 3.9e-114 416.4 614 39.9
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 1.9e-113 414.1 614 38.9
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 1.9e-113 414.1 609 38.1
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 3.3e-113 413.3 614 39.7
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 7.3e-113 412.1 610 39.5
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 9.5e-113 411.8 617 37.6
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 1.6e-112 411.0 609 37.9
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 2.1e-112 410.6 616 39.8
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 2.1e-112 410.6 611 39.0
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 3.6e-112 409.8 619 39.7
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 6.2e-112 409.1 616 39.6
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 6.2e-112 409.1 607 39.5
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 1.1e-111 408.3 612 38.9
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.4e-111 407.9 610 39.7
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 1.4e-111 407.9 609 38.3
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 2.3e-111 407.1 609 39.6
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 2.3e-111 407.1 635 38.6
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 4.0e-111 406.4 613 39.3
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 4.0e-111 406.4 616 38.5
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 5.2e-111 406.0 608 37.3
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 8.9e-111 405.2 609 39.2
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 8.9e-111 405.2 612 39.9
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 1.2e-110 404.8 609 37.9
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.5e-110 404.4 609 37.9
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 2.6e-110 403.7 580 39.7
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 2.6e-110 403.7 614 40.2
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 2.6e-110 403.7 608 38.8
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 5.8e-110 402.5 609 37.8
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 5.8e-110 402.5 608 39.1
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 5.8e-110 402.5 610 39.5
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 7.5e-110 402.1 608 39.3
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 1.3e-109 401.4 611 37.3
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 2.9e-109 400.2 613 37.8
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 4.9e-109 399.4 613 38.8
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 6.4e-109 399.1 612 37.9
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 6.4e-109 399.1 612 38.2
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 8.3e-109 398.7 608 40.0
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.1e-108 398.3 607 37.9
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.4e-108 397.9 612 37.6
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 1.4e-108 397.9 611 38.8
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.9e-108 397.5 609 38.6
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 3.2e-108 396.7 614 39.6
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 4.1e-108 396.4 607 37.9
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 9.2e-108 395.2 586 39.9
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 1.2e-107 394.8 611 38.0
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 1.6e-107 394.4 616 38.0
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.6e-107 394.4 613 37.4
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 2.1e-107 394.0 615 37.7
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 2.7e-107 393.7 608 39.0
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 2.7e-107 393.7 613 37.4
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 2.7e-107 393.7 616 38.1
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 3.5e-107 393.3 612 37.9
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 6.0e-107 392.5 610 37.9
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 6.0e-107 392.5 618 39.2
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 1.7e-106 391.0 615 38.2
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 5.1e-106 389.4 611 38.5
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 7.3e-105 385.6 607 37.2
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 9.5e-105 385.2 612 37.3
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 3.1e-103 380.2 591 38.4
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 8.9e-103 378.6 620 37.7
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 8.9e-103 378.6 612 36.8
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 2.9e-101 373.6 581 37.2
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 6.4e-101 372.5 612 36.8
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 9.2e-100 368.6 569 36.9
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 3.5e-99 366.7 564 37.4
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 3.5e-99 366.7 681 34.9
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 1.3e-98 364.8 613 36.9
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 1.6e-96 357.8 621 35.3
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 4.0e-95 353.2 607 35.7
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 7.6e-94 349.0 579 36.1
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 7.1e-92 342.4 607 34.4
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 9.3e-92 342.0 612 34.8
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 2.1e-91 340.9 612 34.6
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 4.6e-91 339.7 555 36.9
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 6.0e-91 339.3 605 34.7
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 7.8e-91 339.0 655 33.0
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 1.5e-89 334.7 611 36.3
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 1.4e-87 328.2 567 36.0
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 8.4e-85 318.9 471 38.4
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 2.4e-84 317.4 346 47.7
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 1.7e-82 311.2 609 32.3
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 3.6e-80 303.5 611 32.6
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 3.1e-79 300.4 391 42.7
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 4.0e-79 300.1 451 39.7
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.2e-77 294.3 621 32.0
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 1.4e-76 291.6 582 33.3
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 1.4e-76 291.6 480 33.8
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 2.4e-76 290.8 579 34.4
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 3.5e-67 260.4 440 34.8
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 2.8e-56 224.2 522 28.7
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 7.9e-51 206.1 357 35.9
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 1.1e-44 185.7 226 44.7
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 3.2e-44 184.1 376 33.8
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 3.3e-41 174.1 194 40.2
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 5.7e-41 173.3 363 33.6
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 4.5e-38 163.7 171 48.0
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 8.5e-37 159.5 208 37.5
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 5.2e-34 150.2 298 32.9
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 8.5e-29 132.9 161 45.3
Cre01.g013400 Chlamydomonas reinhardtii HOM05D005553 ORTHO05D006866 1.9e-28 131.7 467 25.3
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 6.8e-26 123.2 223 33.6
arahy.Tifrunner.gnm1.ann1.3A36EA Arachis hypogaea HOM05D005553 ORTHO05D006866 7.0e-23 113.2 182 39.0
Cfa026900 Carpinus fangiana HOM05D005553 ORTHO05D006866 3.2e-20 104.4 329 29.8
MCO09G019 Micromonas commoda HOM05D005553 ORTHO05D006866 8.3e-16 89.7 148 39.2
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 4.9e-08 63.9 204 29.9
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 1.1e-07 62.8 48 52.1
unitig_0.g371 Utricularia gibba HOM05D005553 ORTHO05D006866 1.4e-07 62.4 81 46.9


User provided reference genes

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