Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0045s0042 Marchantia polymorpha HOM05D004853 ORTHO05D005865 0.0e+00 1131.7 598 100.0
SEGI_13565 Sequoiadendron giganteum HOM05D004853 ORTHO05D005865 2.2e-167 593.2 601 57.4
MBI19_g34091_MAGBIO Magnolia biondii HOM05D004853 ORTHO05D005865 3.8e-159 565.8 596 53.4
TAR376G0972 Trochodendron aralioides HOM05D004853 ORTHO05D005865 3.2e-158 562.8 597 53.8
CDE07G1728 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 1.6e-157 560.5 590 55.1
TAR623G1093 Trochodendron aralioides HOM05D004853 ORTHO05D005865 2.7e-157 559.7 597 53.4
Cfa004377 Carpinus fangiana HOM05D004853 ORTHO05D005865 8.0e-157 558.1 597 54.6
Haze_15035 Corylus avellana HOM05D004853 ORTHO05D005865 8.0e-157 558.1 590 55.1
Sed0013559 Sechium edule HOM05D004853 ORTHO05D005865 1.0e-156 557.8 598 54.2
QL09p051756 Quercus lobata HOM05D004853 ORTHO05D005865 4.0e-156 555.8 597 53.9
QL09p052469 Quercus lobata HOM05D004853 ORTHO05D005865 4.0e-156 555.8 597 53.6
Aqoxy1G00113 Aquilegia oxysepala HOM05D004853 ORTHO05D005865 8.8e-156 554.7 596 52.7
ClCG09G008800 Citrullus lanatus HOM05D004853 ORTHO05D005865 2.0e-155 553.5 598 52.7
MELO3C021058.2 Cucumis melo HOM05D004853 ORTHO05D005865 2.0e-155 553.5 598 53.3
Pp3c23_19980 Physcomitrium patens HOM05D004853 ORTHO05D005865 2.6e-155 553.1 603 53.7
TWI36G0697 Tripterygium wilfordii HOM05D004853 ORTHO05D005865 7.5e-155 551.6 602 53.8
Potri.015G090600 Populus trichocarpa HOM05D004853 ORTHO05D005865 1.7e-154 550.4 598 52.7
CsaV3_7G026150 Cucumis sativus L. HOM05D004853 ORTHO05D005865 3.7e-154 549.3 598 52.8
Nn7g37081 Nelumbo nucifera HOM05D004853 ORTHO05D005865 1.1e-153 547.7 602 54.2
Eucgr.H00778 Eucalyptus grandis HOM05D004853 ORTHO05D005865 2.4e-153 546.6 600 52.7
PSO384G4190 Papaver somniferum HOM05D004853 ORTHO05D005865 4.1e-153 545.8 601 53.6
EL10Ac7g17891 Beta vulgaris HOM05D004853 ORTHO05D005865 9.1e-153 544.7 612 51.8
Sc17g0002190 Simmondsia chinensis HOM05D004853 ORTHO05D005865 2.0e-152 543.5 613 51.9
Ciclev10019411m.g Citrus clementina HOM05D004853 ORTHO05D005865 4.5e-152 542.3 598 52.8
Manes.13G048900 Manihot esculenta HOM05D004853 ORTHO05D005865 4.5e-152 542.3 600 52.7
COL.COLO4_15628 Corchorus olitorius HOM05D004853 ORTHO05D005865 2.2e-151 540.0 604 52.8
Duzib133G1132 Durio zibethinus HOM05D004853 ORTHO05D005865 2.2e-151 540.0 602 53.7
FAN27G1226 Fragaria x ananassa HOM05D004853 ORTHO05D005865 3.8e-151 539.3 605 52.6
CiPaw.02G023000 Carya illinoinensis HOM05D004853 ORTHO05D005865 5.0e-151 538.9 598 49.7
Gohir.D07G206000 Gossypium hirsutum HOM05D004853 ORTHO05D005865 6.5e-151 538.5 604 52.6
RcHm_v2.0_Chr6g0284201 Rosa chinensis HOM05D004853 ORTHO05D005865 6.5e-151 538.5 600 52.7
MSTRG.18839 Avicennia marina HOM05D004853 ORTHO05D005865 1.5e-150 537.3 600 53.3
CANSAT01G2121 Cannabis sativa HOM05D004853 ORTHO05D005865 1.9e-150 537.0 602 52.7
FAN24G1506 Fragaria x ananassa HOM05D004853 ORTHO05D005865 1.9e-150 537.0 602 52.7
Oeu037767.1 Olea europaea HOM05D004853 ORTHO05D005865 1.9e-150 537.0 598 51.8
FvH4_2g18640 Fragaria vesca HOM05D004853 ORTHO05D005865 2.5e-150 536.6 605 52.2
Sabra15G0112700 Salix brachista HOM05D004853 ORTHO05D005865 4.2e-150 535.8 598 51.7
FAN15G3437 Fragaria x ananassa HOM05D004853 ORTHO05D005865 5.5e-150 535.4 605 52.1
Gorai.001G232300 Gossypium raimondii HOM05D004853 ORTHO05D005865 9.4e-150 534.6 604 52.3
Thecc.01G221500 Theobroma cacao HOM05D004853 ORTHO05D005865 9.4e-150 534.6 604 51.7
CiPaw.01G049500 Carya illinoinensis HOM05D004853 ORTHO05D005865 1.6e-149 533.9 598 52.2
MD10G1160500 Malus domestica HOM05D004853 ORTHO05D005865 2.1e-149 533.5 600 53.3
Atru.chr6.1420 Acer truncatum HOM05D004853 ORTHO05D005865 2.7e-149 533.1 596 53.2
Hma1.2p1_0226F.1_g095440 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 3.0e-148 529.6 600 54.2
Hma1.2p1_2668F.1_g326580 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 3.0e-148 529.6 600 54.2
MD05G1172300 Malus domestica HOM05D004853 ORTHO05D005865 3.0e-148 529.6 599 52.4
THA.LOC104808789 Tarenaya hassleriana HOM05D004853 ORTHO05D005865 4.0e-148 529.3 611 52.4
Dinv12655 Davidia involucrata HOM05D004853 ORTHO05D005865 5.2e-148 528.9 600 53.2
Gohir.A07G199600 Gossypium hirsutum HOM05D004853 ORTHO05D005865 5.2e-148 528.9 606 52.0
Prupe.8G199700 Prunus persica HOM05D004853 ORTHO05D005865 5.2e-148 528.9 604 52.5
DCAR_004725 Daucus carota HOM05D004853 ORTHO05D005865 6.8e-148 528.5 601 53.4
Duzib138G1868 Durio zibethinus HOM05D004853 ORTHO05D005865 1.5e-147 527.3 604 50.2
Lj3C839T9 Lonicera japonica HOM05D004853 ORTHO05D005865 2.6e-147 526.6 597 51.8
Aa31LG8G11930 Aethionema arabicum HOM05D004853 ORTHO05D005865 3.4e-147 526.2 609 51.7
Gorai.007G156000 Gossypium raimondii HOM05D004853 ORTHO05D005865 3.4e-147 526.2 605 52.1
Aa31LG9G4920 Aethionema arabicum HOM05D004853 ORTHO05D005865 5.7e-147 525.4 603 51.4
AUR62038821 Chenopodium quinoa HOM05D004853 ORTHO05D005865 1.3e-146 524.2 613 48.1
Ah.15g093470 Amaranthus hybridus HOM05D004853 ORTHO05D005865 2.8e-146 523.1 611 50.2
AUR62043704 Chenopodium quinoa HOM05D004853 ORTHO05D005865 6.3e-146 521.9 613 48.0
CARHR101430 Cardamine hirsuta HOM05D004853 ORTHO05D005865 1.1e-145 521.2 602 51.2
Peaxi162Scf00238g00032 Petunia axillaris HOM05D004853 ORTHO05D005865 1.1e-145 521.2 598 51.7
SGA_v2.0_scaffold18G08333 Striga asiatica HOM05D004853 ORTHO05D005865 1.1e-145 521.2 598 52.3
Nitab4.5_0000045g0440 Nicotiana tabacum HOM05D004853 ORTHO05D005865 1.4e-145 520.8 600 52.3
PGSC0003DMG400027946 Solanum tuberosum HOM05D004853 ORTHO05D005865 1.4e-145 520.8 600 52.3
Lsat_1_v5_gn_8_89600 Lactuca sativa HOM05D004853 ORTHO05D005865 1.8e-145 520.4 602 52.8
Nitab4.5_0007437g0010 Nicotiana tabacum HOM05D004853 ORTHO05D005865 1.8e-145 520.4 600 52.0
Thhalv10002454m.g Eutrema salsugineum HOM05D004853 ORTHO05D005865 3.1e-145 519.6 601 51.2
Solyc09g059440.1 Solanum lycopersicum HOM05D004853 ORTHO05D005865 5.4e-145 518.8 600 51.7
Phvul.008G130700 Phaseolus vulgaris HOM05D004853 ORTHO05D005865 7.0e-145 518.5 594 51.5
Cpa.g.sc43.113 Carica papaya HOM05D004853 ORTHO05D005865 1.2e-144 517.7 612 50.7
Sopen09g022590 Solanum pennellii HOM05D004853 ORTHO05D005865 1.2e-144 517.7 600 52.0
unitig_899.g15017 Utricularia gibba HOM05D004853 ORTHO05D005865 2.0e-144 516.9 601 50.6
AL3G40790 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 2.7e-144 516.5 605 51.2
Sp3g22680 Schrenkiella parvula HOM05D004853 ORTHO05D005865 2.7e-144 516.5 605 50.9
BcaB06g26724 Brassica carinata HOM05D004853 ORTHO05D005865 4.5e-144 515.8 607 52.1
Carub.0003s2543 Capsella rubella HOM05D004853 ORTHO05D005865 4.5e-144 515.8 609 51.4
Cc01_g16780 Coffea canephora HOM05D004853 ORTHO05D005865 4.5e-144 515.8 603 51.4
CSS0034871 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 7.7e-144 515.0 603 51.2
Psat3g148200 Pisum sativum HOM05D004853 ORTHO05D005865 1.0e-143 514.6 613 51.2
SalBow6G4054 Salvia bowleyana HOM05D004853 ORTHO05D005865 1.3e-143 514.2 596 49.5
BcaC06g35779 Brassica carinata HOM05D004853 ORTHO05D005865 5.0e-143 512.3 603 49.9
BolC7t41562H Brassica oleracea HOM05D004853 ORTHO05D005865 5.0e-143 512.3 603 49.9
BraA03t13534Z Brassica rapa HOM05D004853 ORTHO05D005865 5.0e-143 512.3 601 51.1
AT3G25100 Arabidopsis thaliana HOM05D004853 ORTHO05D005865 1.1e-142 511.1 608 50.7
Medtr7g056153 Medicago truncatula HOM05D004853 ORTHO05D005865 1.1e-142 511.1 608 50.8
BraA07t28514Z Brassica rapa HOM05D004853 ORTHO05D005865 1.9e-142 510.4 601 49.6
Lalb_Chr03g0041521 Lupinus albus HOM05D004853 ORTHO05D005865 2.5e-142 510.0 605 51.1
Rhsim09G0044900 Rhododendron simsii HOM05D004853 ORTHO05D005865 3.2e-142 509.6 603 50.2
unitig_736.g22343 Utricularia gibba HOM05D004853 ORTHO05D005865 3.2e-142 509.6 603 49.9
Glyma.18G167000 Glycine max HOM05D004853 ORTHO05D005865 7.2e-142 508.4 595 50.9
Actinidia09471 Actinidia chinensis HOM05D004853 ORTHO05D005865 9.5e-142 508.1 601 51.1
A07p07260 Brassica napus HOM05D004853 ORTHO05D005865 9.5e-142 508.1 599 49.1
Glyma.08G349400 Glycine max HOM05D004853 ORTHO05D005865 1.6e-141 507.3 599 50.9
Os11g0128400 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 1.6e-141 507.3 609 50.2
Actinidia23713 Actinidia chinensis HOM05D004853 ORTHO05D005865 2.1e-141 506.9 597 51.1
BcaC01g03244 Brassica carinata HOM05D004853 ORTHO05D005865 8.0e-141 505.0 598 50.5
C03p54420 Brassica napus HOM05D004853 ORTHO05D005865 8.0e-141 505.0 598 50.5
BolC3t17728H Brassica oleracea HOM05D004853 ORTHO05D005865 8.0e-141 505.0 598 50.5
Os12g0124700 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 8.0e-141 505.0 609 50.2
CDE04G0889 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 4.0e-140 502.7 596 49.2
BcaB08g34434 Brassica carinata HOM05D004853 ORTHO05D005865 5.2e-140 502.3 602 51.2
Ca_06554_v3 Cicer arietinum L. HOM05D004853 ORTHO05D005865 6.8e-140 501.9 619 49.9
Zm00001eb405460 Zea mays HOM05D004853 ORTHO05D005865 2.6e-139 500.0 613 49.1
HanXRQChr10g0288791 Helianthus annuus HOM05D004853 ORTHO05D005865 9.8e-139 498.0 599 50.6
HanXRQChr14g0439971 Helianthus annuus HOM05D004853 ORTHO05D005865 9.8e-139 498.0 597 50.3
CAN.G128.1 Capsicum annuum HOM05D004853 ORTHO05D005865 6.3e-138 495.4 600 49.5
VMungo1383G0658 Vigna mungo HOM05D004853 ORTHO05D005865 2.4e-137 493.4 594 51.0
Lj1g0018468 Lotus japonicus HOM05D004853 ORTHO05D005865 3.1e-137 493.0 606 48.7
ECA236G0997 Erigeron canadensis HOM05D004853 ORTHO05D005865 5.9e-136 488.8 598 50.8
Migut.D02501 Erythranthe guttata HOM05D004853 ORTHO05D005865 1.0e-135 488.0 606 49.7
SMO307G0064 Selaginella moellendorffii HOM05D004853 ORTHO05D005865 1.7e-135 487.3 607 47.4
Gohir.D07G205900 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.0e-132 478.0 603 49.1
ATR0068G062 Amborella trichopoda HOM05D004853 ORTHO05D005865 4.0e-132 476.1 596 47.8
C07p10970 Brassica napus HOM05D004853 ORTHO05D005865 7.5e-131 471.9 550 48.4
A03p44030 Brassica napus HOM05D004853 ORTHO05D005865 6.4e-130 468.8 550 50.0
CAN.G257.5 Capsicum annuum HOM05D004853 ORTHO05D005865 1.3e-127 461.1 525 51.4
TPR.G6418 Trifolium pratense HOM05D004853 ORTHO05D005865 3.0e-127 459.9 648 46.8
AagrBONN_evm.TU.Sc2ySwM_117.731 Anthoceros agrestis HOM05D004853 ORTHO05D005865 1.9e-126 457.2 619 45.1
GSVIVG01000797001 Vitis vinifera HOM05D004853 ORTHO05D005865 2.5e-126 456.8 595 43.9
DCAR_004733 Daucus carota HOM05D004853 ORTHO05D005865 2.6e-123 446.8 599 48.4
Gohir.A11G139300 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.1e-121 441.4 605 46.1
CBR_g40148 Chara braunii HOM05D004853 ORTHO05D005865 3.3e-118 429.9 588 42.5
Gorai.001G232100 Gossypium raimondii HOM05D004853 ORTHO05D005865 4.9e-114 416.0 571 45.4
Dinv19180 Davidia involucrata HOM05D004853 ORTHO05D005865 1.1e-113 414.8 600 45.0
Gohir.D11G145500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 9.5e-110 401.7 477 52.0
AL706U10010 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 7.3e-102 375.6 443 51.2
Gohir.A07G199500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 6.4e-98 362.5 601 41.4
CSS0045377 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 2.0e-91 340.9 393 52.9
MCO03G169 Micromonas commoda HOM05D004853 ORTHO05D005865 1.3e-71 275.0 606 34.0
arahy.Tifrunner.gnm1.ann1.23GIHT Arachis hypogaea HOM05D004853 ORTHO05D005865 6.3e-69 266.2 602 35.7
CBR_g23403 Chara braunii HOM05D004853 ORTHO05D005865 1.4e-68 265.0 322 46.6
PRCOL_00002078 Prasinoderma coloniale HOM05D004853 ORTHO05D005865 3.8e-58 230.3 593 30.7
CAN.G186.62 Capsicum annuum HOM05D004853 ORTHO05D005865 3.9e-55 220.3 213 53.1
HPP92_007506 Vanilla planifolia HOM05D004853 ORTHO05D005865 3.7e-45 187.2 231 54.5
CSS0009877 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 1.2e-40 172.2 213 47.4
CSS0030898 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 5.5e-33 146.7 247 37.2
Sabra02G0118100 Salix brachista HOM05D004853 ORTHO05D005865 1.0e-31 142.5 146 52.1
Ah.03g146210 Amaranthus hybridus HOM05D004853 ORTHO05D005865 2.6e-22 111.3 154 44.8
Zm00001eb163660 Zea mays HOM05D004853 ORTHO05D005865 2.6e-22 111.3 98 52.0
CBR_g23402 Chara braunii HOM05D004853 ORTHO05D005865 3.5e-19 100.9 117 41.9
Cre06.g270250 Chlamydomonas reinhardtii HOM05D004853 ORTHO05D005865 7.8e-19 99.8 610 23.4
AUR62016553 Chenopodium quinoa HOM05D004853 ORTHO05D005865 1.8e-12 78.6 205 31.2
ECA233G3738 Erigeron canadensis HOM05D004853 ORTHO05D005865 1.0e-10 72.8 57 59.6
CAN.G186.61 Capsicum annuum HOM05D004853 ORTHO05D005865 5.6e-09 67.0 159 32.1
Zm00001eb163670 Zea mays HOM05D004853 ORTHO05D005865 3.6e-08 64.3 90 41.1
A03p44050 Brassica napus HOM05D004853 ORTHO05D005865 2.0e-06 58.5 78 44.9
BraA03t13535Z Brassica rapa HOM05D004853 ORTHO05D005865 2.6e-06 58.2 78 44.9


User provided reference genes

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