Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 2.5e-201 705.3 372 100.0
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 4.1e-42 176.4 198 41.4
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 5.3e-42 176.0 198 42.4
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.2e-41 174.9 196 41.3
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.7e-40 171.0 192 42.2
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 2.2e-40 170.6 192 42.2
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 3.8e-40 169.9 196 41.8
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 8.5e-40 168.7 192 41.1
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 2.5e-39 167.2 198 41.4
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 2.5e-39 167.2 202 40.6
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 3.2e-39 166.8 193 42.0
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.6e-38 164.5 195 40.5
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.6e-38 164.5 196 40.3
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 6.1e-38 162.5 192 41.1
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 7.9e-38 162.2 193 40.9
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 1.0e-37 161.8 195 41.5
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.3e-37 161.4 220 37.7
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 5.1e-37 159.5 195 40.0
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 5.1e-37 159.5 192 39.1
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.9e-36 157.5 193 40.9
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 1.9e-36 157.5 200 38.0
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 3.3e-36 156.8 193 38.9
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 4.3e-36 156.4 186 40.9
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 4.3e-36 156.4 206 38.3
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 4.3e-36 156.4 207 36.2
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 9.7e-36 155.2 196 38.3
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.3e-35 154.8 195 40.0
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 2.2e-35 154.1 192 39.6
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.8e-35 153.7 192 37.5
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 2.8e-35 153.7 205 37.1
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 3.7e-35 153.3 196 39.8
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 6.3e-35 152.5 192 37.5
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 8.2e-35 152.1 206 36.9
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.4e-34 151.4 193 38.9
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.3e-34 149.4 206 39.3
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 6.9e-34 149.1 192 41.1
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 6.9e-34 149.1 199 39.2
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 2.0e-33 147.5 190 39.5
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 3.4e-33 146.7 180 40.0
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 3.4e-33 146.7 204 36.8
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 5.9e-33 146.0 196 39.3
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 5.9e-33 146.0 202 37.1
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.0e-32 145.2 198 37.4
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 6.5e-32 142.5 201 37.3
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.1e-31 141.7 158 42.4
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 1.9e-31 141.0 225 33.8
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 9.4e-31 138.7 156 41.0
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 9.4e-31 138.7 199 35.7
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 2.1e-30 137.5 227 33.9
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 6.1e-30 136.0 147 42.9
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 3.9e-29 133.3 192 37.0
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 5.1e-29 132.9 160 39.4
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 6.3e-27 125.9 177 36.7
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 4.1e-26 123.2 199 33.2
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.7e-24 117.9 223 31.4
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 8.5e-24 115.5 210 34.3
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 8.5e-24 115.5 154 39.6
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 2.5e-23 114.0 234 30.8
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 5.5e-23 112.8 137 39.4
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.8e-21 107.8 118 44.9
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 1.5e-20 104.8 105 43.8
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.5e-20 104.8 109 45.0
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 5.7e-20 102.8 114 43.0
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 9.7e-20 102.1 217 32.7
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 2.2e-19 100.9 125 39.2
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 1.4e-18 98.2 113 44.2
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 2.4e-18 97.4 106 39.6
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 3.1e-18 97.1 193 31.1
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 7.0e-18 95.9 88 50.0
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 4.5e-17 93.2 101 43.6
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 7.7e-17 92.4 95 42.1
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 1.5e-15 88.2 128 35.2
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 3.2e-15 87.0 91 45.1
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 1.8e-13 81.3 84 45.2
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.0e-13 80.5 99 38.4
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 4.0e-13 80.1 112 36.6
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 5.2e-13 79.7 74 47.3
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 1.5e-12 78.2 102 39.2
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 8.2e-11 72.4 84 42.9
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 1.8e-10 71.2 100 36.0
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 7.0e-10 69.3 73 42.5


User provided reference genes

Program Settings