Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0044s0100 Marchantia polymorpha HOM05D006213 ORTHO05D008107 2.6e-294 1014.6 508 100.0
Pp3c18_21620 Physcomitrium patens HOM05D006213 ORTHO05D008107 4.2e-159 565.5 487 58.1
Dinv44047 Davidia involucrata HOM05D006213 ORTHO05D008107 2.6e-156 556.2 484 56.0
PSO017G1536 Papaver somniferum HOM05D006213 ORTHO05D008107 2.6e-156 556.2 484 55.6
PSO837G0013 Papaver somniferum HOM05D006213 ORTHO05D008107 6.3e-155 551.6 484 55.4
RcHm_v2.0_Chr1g0346061 Rosa chinensis HOM05D006213 ORTHO05D008107 2.4e-154 549.7 484 55.8
CiPaw.13G025000 Carya illinoinensis HOM05D006213 ORTHO05D008107 3.5e-153 545.8 496 54.2
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 4.5e-153 545.4 484 56.0
CAN.G1585.8 Capsicum annuum HOM05D006213 ORTHO05D008107 7.7e-153 544.7 484 55.0
Os04g0544900 Oryza sativa ssp. japonica HOM05D006213 ORTHO05D008107 2.3e-152 543.1 484 55.6
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 1.9e-151 540.0 470 56.8
ATR0665G630 Amborella trichopoda HOM05D006213 ORTHO05D008107 3.3e-151 539.3 486 52.9
Duzib133G0253 Durio zibethinus HOM05D006213 ORTHO05D008107 3.3e-151 539.3 485 54.6
Solyc01g089900.4 Solanum lycopersicum HOM05D006213 ORTHO05D008107 4.2e-151 538.9 484 54.3
ECA234G2079 Erigeron canadensis HOM05D006213 ORTHO05D008107 2.1e-150 536.6 468 56.0
Aqoxy3G02673 Aquilegia oxysepala HOM05D006213 ORTHO05D008107 2.8e-150 536.2 487 54.8
Thecc.01G397800 Theobroma cacao HOM05D006213 ORTHO05D008107 2.8e-150 536.2 484 53.7
HanXRQChr17g0562541 Helianthus annuus HOM05D006213 ORTHO05D008107 6.1e-150 535.0 484 54.1
Gorai.004G166900 Gossypium raimondii HOM05D006213 ORTHO05D008107 3.0e-149 532.7 485 54.0
Gohir.A08G139600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 5.2e-149 531.9 484 53.7
Gohir.D08G160600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 5.2e-149 531.9 484 53.9
CDE02G2871 Ceratophyllum demersum HOM05D006213 ORTHO05D008107 1.5e-148 530.4 469 55.0
CsaV3_6G006460 Cucumis sativus L. HOM05D006213 ORTHO05D008107 2.6e-148 529.6 496 54.0
ClCG06G000670 Citrullus lanatus HOM05D006213 ORTHO05D008107 4.4e-148 528.9 485 54.4
Eucgr.E01545 Eucalyptus grandis HOM05D006213 ORTHO05D008107 4.4e-148 528.9 485 54.2
Ciclev10019843m.g Citrus clementina HOM05D006213 ORTHO05D008107 7.5e-148 528.1 484 53.7
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 7.5e-148 528.1 473 55.4
Sed0013772 Sechium edule HOM05D006213 ORTHO05D008107 9.8e-148 527.7 484 54.1
A10p00090 Brassica napus HOM05D006213 ORTHO05D008107 2.2e-147 526.6 484 52.5
BraA10t42287Z Brassica rapa HOM05D006213 ORTHO05D008107 2.8e-147 526.2 484 52.5
C05p00060 Brassica napus HOM05D006213 ORTHO05D008107 4.9e-147 525.4 484 52.3
BolC5t28793H Brassica oleracea HOM05D006213 ORTHO05D008107 4.9e-147 525.4 484 52.3
Lsat_1_v5_gn_4_39261 Lactuca sativa HOM05D006213 ORTHO05D008107 1.4e-146 523.9 481 54.1
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 2.4e-146 523.1 460 55.0
Manes.05G056250 Manihot esculenta HOM05D006213 ORTHO05D008107 4.1e-146 522.3 484 54.8
Sc23g0004890 Simmondsia chinensis HOM05D006213 ORTHO05D008107 7.0e-146 521.5 484 52.9
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 2.7e-145 519.6 489 53.0
MSTRG.20674 Avicennia marina HOM05D006213 ORTHO05D008107 2.7e-145 519.6 484 52.3
THA.LOC104814061 Tarenaya hassleriana HOM05D006213 ORTHO05D008107 2.7e-145 519.6 485 53.4
Actinidia30939 Actinidia chinensis HOM05D006213 ORTHO05D008107 4.5e-145 518.8 464 55.2
Medtr8g007345 Medicago truncatula HOM05D006213 ORTHO05D008107 4.5e-145 518.8 468 54.7
CARHR000180 Cardamine hirsuta HOM05D006213 ORTHO05D008107 7.8e-145 518.1 484 52.1
Psat4g223120 Pisum sativum HOM05D006213 ORTHO05D008107 7.8e-145 518.1 484 53.7
PGR042G3832 Punica granatum HOM05D006213 ORTHO05D008107 7.8e-145 518.1 484 53.1
Phvul.010G045600 Phaseolus vulgaris HOM05D006213 ORTHO05D008107 2.3e-144 516.5 484 53.7
Glyma.03G108200 Glycine max HOM05D006213 ORTHO05D008107 6.6e-144 515.0 484 53.3
Carub.0001s0002 Capsella rubella HOM05D006213 ORTHO05D008107 8.6e-144 514.6 484 51.9
FAN06G2734 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.1e-143 514.2 499 51.7
FAN06G3851 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.1e-143 514.2 499 51.7
FAN06G4345 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.1e-143 514.2 499 51.7
TWI14G1148 Tripterygium wilfordii HOM05D006213 ORTHO05D008107 1.1e-143 514.2 484 52.5
AL1G10080 Arabidopsis lyrata HOM05D006213 ORTHO05D008107 1.9e-143 513.5 484 51.4
Potri.002G139200 Populus trichocarpa HOM05D006213 ORTHO05D008107 1.9e-143 513.5 484 53.7
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 2.5e-143 513.1 467 54.6
Lalb_Chr12g0210581 Lupinus albus HOM05D006213 ORTHO05D008107 4.3e-143 512.3 493 52.5
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 5.6e-143 511.9 484 52.7
FAN03G1287 Fragaria x ananassa HOM05D006213 ORTHO05D008107 7.3e-143 511.5 499 51.9
BraA09t42282Z Brassica rapa HOM05D006213 ORTHO05D008107 9.5e-143 511.1 492 51.0
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 1.2e-142 510.8 496 51.4
Migut.B01508 Erythranthe guttata HOM05D006213 ORTHO05D008107 2.1e-142 510.0 484 51.4
FvH4_7g09360 Fragaria vesca HOM05D006213 ORTHO05D008107 2.1e-142 510.0 484 52.7
MBI04_g13842_MAGBIO Magnolia biondii HOM05D006213 ORTHO05D008107 2.1e-142 510.0 488 52.3
Oeu037443.2 Olea europaea HOM05D006213 ORTHO05D008107 2.1e-142 510.0 470 51.9
Sp1g00110 Schrenkiella parvula HOM05D006213 ORTHO05D008107 2.8e-142 509.6 484 51.7
Nn1g00791 Nelumbo nucifera HOM05D006213 ORTHO05D008107 3.1e-141 506.1 483 51.6
MELO3C022474.2 Cucumis melo HOM05D006213 ORTHO05D008107 5.2e-141 505.4 459 55.6
Aa31LG1G11550 Aethionema arabicum HOM05D006213 ORTHO05D008107 3.7e-139 499.2 515 48.9
BcaC07g42440 Brassica carinata HOM05D006213 ORTHO05D008107 3.2e-138 496.1 485 50.3
CANSAT25G1963 Cannabis sativa HOM05D006213 ORTHO05D008107 3.2e-138 496.1 484 51.4
Zm00001eb075160 Zea mays HOM05D006213 ORTHO05D008107 1.6e-137 493.8 484 51.0
Lj3g0010513 Lotus japonicus HOM05D006213 ORTHO05D008107 7.8e-137 491.5 459 52.9
AUR62013761 Chenopodium quinoa HOM05D006213 ORTHO05D008107 9.5e-135 484.6 499 50.1
Sabra02G0108200 Salix brachista HOM05D006213 ORTHO05D008107 6.2e-134 481.9 533 48.6
MD07G1098100 Malus domestica HOM05D006213 ORTHO05D008107 8.0e-134 481.5 427 55.7
Sabra02G0108400 Salix brachista HOM05D006213 ORTHO05D008107 3.1e-133 479.6 533 48.4
AT1G02145 Arabidopsis thaliana HOM05D006213 ORTHO05D008107 4.0e-133 479.2 455 51.6
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 1.1e-130 471.1 444 55.4
Peaxi162Scf00853g00316 Petunia axillaris HOM05D006213 ORTHO05D008107 9.2e-130 468.0 491 49.1
TPR.G32127 Trifolium pratense HOM05D006213 ORTHO05D008107 1.1e-127 461.1 510 49.4
A09p69370 Brassica napus HOM05D006213 ORTHO05D008107 1.5e-127 460.7 494 47.8
Hund17106 Selenicereus undatus HOM05D006213 ORTHO05D008107 5.6e-127 458.8 496 48.6
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 3.1e-125 453.0 518 46.5
vmacro13511 Vaccinium macrocarpon HOM05D006213 ORTHO05D008107 1.2e-124 451.1 601 42.3
SGA_v2.0_scaffold52G19244 Striga asiatica HOM05D006213 ORTHO05D008107 1.7e-123 447.2 454 51.1
BcaB03g13635 Brassica carinata HOM05D006213 ORTHO05D008107 2.2e-123 446.8 484 46.9
Sopen01g035740 Solanum pennellii HOM05D006213 ORTHO05D008107 1.1e-122 444.5 412 53.9
Thhalv10007459m.g Eutrema salsugineum HOM05D006213 ORTHO05D008107 1.4e-122 444.1 400 53.2
AUR62023393 Chenopodium quinoa HOM05D006213 ORTHO05D008107 4.3e-119 432.6 506 44.9
BolC8t52928H Brassica oleracea HOM05D006213 ORTHO05D008107 2.4e-114 416.8 503 44.1
FAN10G1434 Fragaria x ananassa HOM05D006213 ORTHO05D008107 6.0e-113 412.1 428 50.0
PGSC0003DMG402031172 Solanum tuberosum HOM05D006213 ORTHO05D008107 1.3e-110 404.4 321 59.8
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 2.4e-109 400.2 362 54.7
Glyma.07G119300 Glycine max HOM05D006213 ORTHO05D008107 3.4e-108 396.4 394 50.0
EL10Ac1g00745 Beta vulgaris HOM05D006213 ORTHO05D008107 6.4e-107 392.1 497 42.7
Lj2g0022411 Lotus japonicus HOM05D006213 ORTHO05D008107 1.3e-104 384.4 394 49.5
Cc02_g25210 Coffea canephora HOM05D006213 ORTHO05D008107 7.3e-103 378.6 322 56.5
unitig_8.g3848 Utricularia gibba HOM05D006213 ORTHO05D008107 1.8e-101 374.0 488 43.9
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 5.5e-90 335.9 470 41.5
VMungo0331G0117 Vigna mungo HOM05D006213 ORTHO05D008107 1.2e-89 334.7 664 34.2
Haze_02866 Corylus avellana HOM05D006213 ORTHO05D008107 2.3e-88 330.5 522 38.9
MCO12G031 Micromonas commoda HOM05D006213 ORTHO05D008107 1.4e-85 321.2 551 38.3
Lj9A554T27 Lonicera japonica HOM05D006213 ORTHO05D008107 2.2e-78 297.4 309 49.5
Sabra02G0107000 Salix brachista HOM05D006213 ORTHO05D008107 7.2e-74 282.3 349 44.4
PRCOL_00003622 Prasinoderma coloniale HOM05D006213 ORTHO05D008107 4.6e-73 279.6 486 39.3
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 1.4e-69 268.1 380 41.1
Rhsim07G0037600 Rhododendron simsii HOM05D006213 ORTHO05D008107 1.4e-69 268.1 432 38.7
SGA_v2.0_scaffold340G49332 Striga asiatica HOM05D006213 ORTHO05D008107 8.8e-64 248.8 492 34.1
SHI13624 Sapria himalayana HOM05D006213 ORTHO05D008107 8.2e-62 242.3 304 44.4
Atru.chr5.108 Acer truncatum HOM05D006213 ORTHO05D008107 3.2e-58 230.3 253 49.4
SEGI_13726 Sequoiadendron giganteum HOM05D006213 ORTHO05D008107 1.2e-57 228.4 183 57.9
FAN01G1024 Fragaria x ananassa HOM05D006213 ORTHO05D008107 4.8e-54 216.5 188 55.9
FAN06G1264 Fragaria x ananassa HOM05D006213 ORTHO05D008107 2.3e-40 171.0 188 46.3
DCAR_029492 Daucus carota HOM05D006213 ORTHO05D008107 1.7e-35 154.8 161 50.3
Ca_14798_v3 Cicer arietinum L. HOM05D006213 ORTHO05D008107 3.5e-28 130.6 116 55.2
arahy.Tifrunner.gnm1.ann1.RXQ5U4 Arachis hypogaea HOM05D006213 ORTHO05D008107 1.7e-27 128.3 156 44.9
Cc02_g25230 Coffea canephora HOM05D006213 ORTHO05D008107 1.7e-22 111.7 105 48.6
DCAR_029493 Daucus carota HOM05D006213 ORTHO05D008107 1.1e-16 92.4 58 63.8
Psat4g223040 Pisum sativum HOM05D006213 ORTHO05D008107 2.3e-16 91.3 92 52.2
SHI13625 Sapria himalayana HOM05D006213 ORTHO05D008107 1.7e-14 85.1 109 43.1
Psat5g245640 Pisum sativum HOM05D000300 ORTHO05D000383 1.6e-12 78.6 57 64.9
Migut.B01510 Erythranthe guttata HOM05D006213 ORTHO05D003423 3.9e-11 73.9 43 69.8
FAN06G1132 Fragaria x ananassa HOM05D006213 ORTHO05D008107 3.3e-10 70.9 50 64.0
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 1.8e-08 65.1 292 24.3
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 4.0e-08 63.9 279 24.7
HanXRQChr09g0244361 Helianthus annuus HOM05D005919 ORTHO05D007176 2.6e-07 61.2 195 30.8
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 3.4e-07 60.8 220 24.5
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 5.8e-07 60.1 228 26.3
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 5.8e-07 60.1 228 26.3
PRCOL_00000120 Prasinoderma coloniale HOM05D000722 ORTHO05D007176 5.8e-07 60.1 301 29.2
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 7.6e-07 59.7 222 25.2
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 9.9e-07 59.3 114 30.7
Cpa.g.sc42.125 Carica papaya HOM05D005919 ORTHO05D007176 1.7e-06 58.5 229 24.0
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 1.7e-06 58.5 408 23.0
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 1.7e-06 58.5 112 30.4
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 2.9e-06 57.8 114 28.9
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 2.9e-06 57.8 221 24.0
Oeu031853.1 Olea europaea HOM05D005919 ORTHO05D007176 2.9e-06 57.8 207 24.2
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 3.7e-06 57.4 408 23.0
arahy.Tifrunner.gnm1.ann1.PL2W5K Arachis hypogaea HOM05D006213 ORTHO05D008107 4.9e-06 57.0 55 47.3
BcaC03g13443 Brassica carinata HOM05D005919 ORTHO05D007176 4.9e-06 57.0 129 28.7
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 4.9e-06 57.0 129 28.7
C02p07360 Brassica napus HOM05D005919 ORTHO05D007176 6.4e-06 56.6 129 28.7
BolC2t06667H Brassica oleracea HOM05D005919 ORTHO05D007176 6.4e-06 56.6 129 28.7
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 6.4e-06 56.6 203 24.1
CARHR198500 Cardamine hirsuta HOM05D005919 ORTHO05D007176 8.4e-06 56.2 114 28.9
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 8.4e-06 56.2 349 22.9


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