Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 1.0e-230 803.5 556 100.0
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 2.7e-50 204.1 187 56.1
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 1.8e-46 191.4 163 57.7
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 3.1e-46 190.7 178 55.6
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 4.1e-46 190.3 163 58.3
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 5.3e-46 189.9 163 57.1
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 9.0e-46 189.1 148 64.9
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 2.0e-45 188.0 161 57.1
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 3.4e-45 187.2 157 57.3
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 3.4e-45 187.2 177 54.2
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 1.0e-44 185.7 133 65.4
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 1.7e-44 184.9 176 54.0
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 1.7e-44 184.9 162 58.0
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 2.2e-44 184.5 140 62.9
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 2.2e-44 184.5 140 62.9
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 2.9e-44 184.1 136 65.4
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 2.9e-44 184.1 161 57.8
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 3.8e-44 183.7 136 65.4
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 3.8e-44 183.7 136 64.7
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 3.8e-44 183.7 136 65.4
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 3.8e-44 183.7 136 63.2
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 5.0e-44 183.3 169 53.3
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 5.0e-44 183.3 149 59.1
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 5.0e-44 183.3 150 60.0
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 5.0e-44 183.3 136 64.0
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 6.5e-44 183.0 213 47.4
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 6.5e-44 183.0 139 64.0
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 6.5e-44 183.0 150 59.3
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 6.5e-44 183.0 214 49.1
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 1.1e-43 182.2 179 52.5
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 1.4e-43 181.8 171 53.8
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 1.4e-43 181.8 135 62.2
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 1.4e-43 181.8 136 61.8
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 1.9e-43 181.4 152 55.9
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 3.2e-43 180.6 165 55.2
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 3.2e-43 180.6 134 61.9
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 3.2e-43 180.6 136 61.0
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 4.2e-43 180.3 136 61.8
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 4.2e-43 180.3 136 63.2
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 4.2e-43 180.3 136 61.0
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 4.2e-43 180.3 136 61.0
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 4.2e-43 180.3 136 62.5
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 4.2e-43 180.3 161 54.7
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 5.5e-43 179.9 163 56.4
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 7.2e-43 179.5 136 62.5
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 7.2e-43 179.5 132 63.6
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 9.4e-43 179.1 268 48.9
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 9.4e-43 179.1 136 62.5
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 1.6e-42 178.3 146 58.9
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 2.1e-42 177.9 136 62.5
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 2.1e-42 177.9 133 62.4
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 2.7e-42 177.6 171 53.2
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 2.7e-42 177.6 136 61.0
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 3.6e-42 177.2 150 57.3
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 3.6e-42 177.2 150 57.3
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 3.6e-42 177.2 136 61.0
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 3.6e-42 177.2 136 61.0
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 3.6e-42 177.2 136 61.0
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 4.6e-42 176.8 133 63.2
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 7.9e-42 176.0 162 53.7
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 7.9e-42 176.0 170 53.5
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 1.4e-41 175.3 149 56.4
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.4e-41 175.3 136 60.3
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 1.8e-41 174.9 136 60.3
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 1.8e-41 174.9 183 50.3
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 1.8e-41 174.9 183 50.3
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 1.8e-41 174.9 136 58.8
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 1.8e-41 174.9 136 61.0
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 1.8e-41 174.9 146 56.2
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 3.0e-41 174.1 161 52.8
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 3.0e-41 174.1 161 52.8
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 3.0e-41 174.1 136 61.0
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 3.0e-41 174.1 136 61.0
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 3.9e-41 173.7 136 59.6
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 5.1e-41 173.3 183 49.7
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 6.7e-41 172.9 183 50.3
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 6.7e-41 172.9 132 62.1
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 1.1e-40 172.2 135 60.7
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 1.1e-40 172.2 174 49.4
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 3.3e-40 170.6 158 54.4
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 3.3e-40 170.6 158 54.4
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 4.3e-40 170.2 135 60.0
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 7.4e-40 169.5 133 60.2
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 9.7e-40 169.1 130 61.5
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 9.7e-40 169.1 192 47.9
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 1.3e-39 168.7 214 44.9
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 1.7e-39 168.3 136 58.8
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.1e-38 165.6 168 51.8
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 8.5e-36 156.0 199 43.2
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 1.2e-34 152.1 156 49.4
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 6.1e-34 149.8 136 57.4
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 3.0e-33 147.5 121 60.3
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.5e-32 145.2 122 56.6
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 1.3e-31 142.1 92 70.7
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 2.0e-29 134.8 136 52.2
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 3.6e-26 124.0 131 50.4
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 8.0e-26 122.9 155 45.2
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 3.8e-20 104.0 136 43.4
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 6.7e-17 93.2 104 47.1
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 3.3e-16 90.9 170 36.5
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 5.7e-16 90.1 167 34.1
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 6.3e-15 86.7 143 39.9
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 4.1e-14 84.0 138 38.4
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 8.5e-12 76.3 151 35.8
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 8.5e-12 76.3 151 35.8
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 8.8e-09 66.2 73 46.6
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 2.6e-08 64.7 31 87.1
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 1.7e-07 62.0 96 33.3
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 1.7e-07 62.0 84 41.7
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 1.7e-07 62.0 72 43.1
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 2.8e-07 61.2 31 77.4
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 4.1e-06 57.4 54 46.3


User provided reference genes

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