Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0044s0080 Marchantia polymorpha HOM05D005911 ORTHO05D007565 8.4e-174 613.6 316 100.0
Pp3c15_14160 Physcomitrium patens HOM05D005911 ORTHO05D007565 1.3e-65 254.2 310 46.8
AagrBONN_evm.TU.Sc2ySwM_117.291 Anthoceros agrestis HOM05D005911 ORTHO05D007565 1.9e-64 250.4 291 50.2
SEGI_31956 Sequoiadendron giganteum HOM05D005911 ORTHO05D007565 2.8e-60 236.5 345 41.2
ATR0733G150 Amborella trichopoda HOM05D005911 ORTHO05D007565 1.2e-58 231.1 335 40.9
CiPaw.06G137300 Carya illinoinensis HOM05D005911 ORTHO05D007565 7.6e-58 228.4 330 40.9
MBI16_g17455_MAGBIO Magnolia biondii HOM05D005911 ORTHO05D007565 1.4e-56 224.2 336 40.8
Sed0023974 Sechium edule HOM05D005911 ORTHO05D007565 2.5e-56 223.4 331 41.4
ClCG02G005220 Citrullus lanatus HOM05D005911 ORTHO05D007565 5.5e-56 222.2 333 41.7
Cfa005027 Carpinus fangiana HOM05D005911 ORTHO05D007565 7.1e-56 221.9 329 39.8
Manes.17G099400 Manihot esculenta HOM05D005911 ORTHO05D007565 1.6e-55 220.7 330 39.7
MD10G1080400 Malus domestica HOM05D005911 ORTHO05D007565 1.0e-54 218.0 333 39.9
COL.COLO4_32449 Corchorus olitorius HOM05D005911 ORTHO05D007565 1.3e-54 217.6 329 39.8
Cc02_g17800 Coffea canephora HOM05D005911 ORTHO05D007565 3.0e-54 216.5 329 39.2
Nn1g05068 Nelumbo nucifera HOM05D005911 ORTHO05D007565 3.0e-54 216.5 331 39.0
Dinv42087 Davidia involucrata HOM05D005911 ORTHO05D007565 6.7e-54 215.3 331 39.9
QL11p042848 Quercus lobata HOM05D005911 ORTHO05D007565 8.7e-54 214.9 330 39.7
Thecc.02G123100 Theobroma cacao HOM05D005911 ORTHO05D007565 8.7e-54 214.9 330 40.0
Cpa.g.sc62.118 Carica papaya HOM05D005911 ORTHO05D007565 1.5e-53 214.2 337 40.1
Prupe.8G101700 Prunus persica HOM05D005911 ORTHO05D007565 1.5e-53 214.2 324 39.5
CSS0013374 Camellia sinensis var. sinensis HOM05D005911 ORTHO05D007565 2.5e-53 213.4 336 37.2
CsaV3_7G023300 Cucumis sativus L. HOM05D005911 ORTHO05D007565 2.5e-53 213.4 333 39.6
Gohir.D04G144200 Gossypium hirsutum HOM05D005911 ORTHO05D007565 4.3e-53 212.6 332 38.9
Gorai.012G129800 Gossypium raimondii HOM05D005911 ORTHO05D007565 4.3e-53 212.6 332 38.9
DCAR_003638 Daucus carota HOM05D005911 ORTHO05D007565 9.7e-53 211.5 338 36.4
FAN15G1485 Fragaria x ananassa HOM05D005911 ORTHO05D007565 9.7e-53 211.5 337 37.1
Potri.004G152100 Populus trichocarpa HOM05D005911 ORTHO05D007565 1.3e-52 211.1 336 38.4
RcHm_v2.0_Chr6g0263461 Rosa chinensis HOM05D005911 ORTHO05D007565 1.3e-52 211.1 331 38.1
Duzib248G0238 Durio zibethinus HOM05D005911 ORTHO05D007565 2.2e-52 210.3 332 39.2
Aqoxy5G01675 Aquilegia oxysepala HOM05D005911 ORTHO05D007565 3.7e-52 209.5 335 36.7
TWI31G0066 Tripterygium wilfordii HOM05D005911 ORTHO05D007565 3.7e-52 209.5 331 38.1
Atru.chr5.2957 Acer truncatum HOM05D005911 ORTHO05D007565 4.8e-52 209.1 331 38.7
GSVIVG01024153001 Vitis vinifera HOM05D005911 ORTHO05D007565 4.8e-52 209.1 337 39.2
Eucgr.G00462 Eucalyptus grandis HOM05D005911 ORTHO05D007565 6.3e-52 208.8 332 37.7
TAR628G1003 Trochodendron aralioides HOM05D005911 ORTHO05D007565 8.2e-52 208.4 337 38.9
Actinidia17824 Actinidia chinensis HOM05D005911 ORTHO05D007565 1.8e-51 207.2 338 36.4
Migut.N01227 Erythranthe guttata HOM05D005911 ORTHO05D007565 1.8e-51 207.2 330 39.1
Phvul.007G233200 Phaseolus vulgaris HOM05D005911 ORTHO05D007565 2.4e-51 206.8 337 36.8
vmacro19435 Vaccinium macrocarpon HOM05D005911 ORTHO05D007565 2.4e-51 206.8 361 36.6
FAN20G0571 Fragaria x ananassa HOM05D005911 ORTHO05D007565 4.1e-51 206.1 330 36.7
arahy.Tifrunner.gnm1.ann1.CA4G6V Arachis hypogaea HOM05D005911 ORTHO05D007565 5.3e-51 205.7 332 37.7
Eucgr.G01900 Eucalyptus grandis HOM05D005911 ORTHO05D007565 5.3e-51 205.7 333 37.2
FAN24G3462 Fragaria x ananassa HOM05D005911 ORTHO05D007565 5.3e-51 205.7 336 36.0
Rhsim05G0076000 Rhododendron simsii HOM05D005911 ORTHO05D007565 5.3e-51 205.7 331 37.8
FvH4_2g08380 Fragaria vesca HOM05D005911 ORTHO05D007565 6.9e-51 205.3 336 36.0
TPR.G20990 Trifolium pratense HOM05D005911 ORTHO05D007565 6.9e-51 205.3 337 35.6
CAN.G322.116 Capsicum annuum HOM05D005911 ORTHO05D007565 2.6e-50 203.4 331 36.9
Psat3g133040 Pisum sativum HOM05D005911 ORTHO05D007565 2.6e-50 203.4 342 35.1
Glyma.20G019800 Glycine max HOM05D005911 ORTHO05D007565 3.4e-50 203.0 336 36.6
Medtr4g084100 Medicago truncatula HOM05D005911 ORTHO05D007565 5.9e-50 202.2 332 36.1
PGR042G3082 Punica granatum HOM05D005911 ORTHO05D009502 7.7e-50 201.8 333 36.6
Ca_18760_v3 Cicer arietinum L. HOM05D005911 ORTHO05D007565 1.3e-49 201.1 338 34.9
Oeu014335.1 Olea europaea HOM05D005911 ORTHO05D007565 2.2e-49 200.3 332 39.2
THA.LOC104804910 Tarenaya hassleriana HOM05D005911 ORTHO05D007565 5.0e-49 199.1 339 37.8
Peaxi162Scf00016g00941 Petunia axillaris HOM05D005911 ORTHO05D007565 6.5e-49 198.7 337 35.9
Sc14g0001790 Simmondsia chinensis HOM05D005911 ORTHO05D007565 6.5e-49 198.7 350 35.4
SalBow3G0191 Salvia bowleyana HOM05D005911 ORTHO05D007565 8.5e-49 198.4 339 36.3
PGSC0003DMG400025190 Solanum tuberosum HOM05D005911 ORTHO05D007565 8.5e-49 198.4 331 36.6
Lj4g0018405 Lotus japonicus HOM05D005911 ORTHO05D007565 1.1e-48 198.0 339 35.7
EL10Ac9g21750 Beta vulgaris HOM05D005911 ORTHO05D007565 1.4e-48 197.6 332 35.8
CBR_g27891 Chara braunii HOM05D005911 ORTHO05D007565 1.4e-48 197.6 337 38.6
Thhalv10011559m.g Eutrema salsugineum HOM05D005911 ORTHO05D007565 1.4e-48 197.6 325 38.8
Sopen01g051640 Solanum pennellii HOM05D005911 ORTHO05D007565 1.9e-48 197.2 331 36.6
Solyc01g109450.3 Solanum lycopersicum HOM05D005911 ORTHO05D007565 2.5e-48 196.8 331 36.3
HanXRQChr16g0504971 Helianthus annuus HOM05D005911 ORTHO05D007565 5.5e-48 195.7 325 37.2
Os05g0185700 Oryza sativa ssp. japonica HOM05D005911 ORTHO05D007565 5.5e-48 195.7 338 37.0
Nitab4.5_0001794g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 7.2e-48 195.3 331 36.9
SGA_v2.0_scaffold44G16630 Striga asiatica HOM05D005911 ORTHO05D007565 7.2e-48 195.3 314 38.9
Lalb_Chr16g0385211 Lupinus albus HOM05D005911 ORTHO05D007565 9.4e-48 194.9 338 34.3
Sp1g36210 Schrenkiella parvula HOM05D005911 ORTHO05D007565 9.4e-48 194.9 329 38.6
AUR62011353 Chenopodium quinoa HOM05D005911 ORTHO05D007565 2.1e-47 193.7 331 36.3
ECA236G0345 Erigeron canadensis HOM05D005911 ORTHO05D007565 2.7e-47 193.4 350 36.0
AUR62016709 Chenopodium quinoa HOM05D005911 ORTHO05D007565 1.0e-46 191.4 331 36.0
AT1G49350 Arabidopsis thaliana HOM05D005911 ORTHO05D007565 1.4e-46 191.0 334 38.3
MSTRG.20102 Avicennia marina HOM05D005911 ORTHO05D007565 1.4e-46 191.0 331 37.5
BcaB02g11057 Brassica carinata HOM05D005911 ORTHO05D007565 1.4e-46 191.0 325 38.8
Sabra04G0100900 Salix brachista HOM05D005911 ORTHO05D007565 1.4e-46 191.0 369 35.0
Carub.0001s3853 Capsella rubella HOM05D005911 ORTHO05D007565 2.3e-46 190.3 330 37.3
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 6.7e-46 188.7 321 38.0
A05p20650 Brassica napus HOM05D005911 ORTHO05D007565 8.8e-46 188.3 326 36.8
Nitab4.5_0008989g0030 Nicotiana tabacum HOM05D005911 ORTHO05D007565 1.1e-45 188.0 337 37.4
BraA05t20973Z Brassica rapa HOM05D005911 ORTHO05D007565 2.0e-45 187.2 326 36.5
CAN.G149.23 Capsicum annuum HOM05D005911 ORTHO05D007565 3.3e-45 186.4 326 35.9
BcaC05g27521 Brassica carinata HOM05D005911 ORTHO05D007565 1.7e-44 184.1 326 36.5
BolC5t32220H Brassica oleracea HOM05D005911 ORTHO05D007565 1.7e-44 184.1 326 36.8
AL1G56310 Arabidopsis lyrata HOM05D005911 ORTHO05D007565 3.7e-44 183.0 328 36.9
Hund00288 Selenicereus undatus HOM05D005911 ORTHO05D007565 3.7e-44 183.0 337 34.1
C05p34650 Brassica napus HOM05D005911 ORTHO05D007565 1.1e-43 181.4 326 36.2
Nitab4.5_0000443g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 1.1e-43 181.4 322 37.6
VMungo0720G1659 Vigna mungo HOM05D005911 ORTHO05D007565 2.4e-43 180.3 368 32.3
Haze_02358 Corylus avellana HOM05D005911 ORTHO05D009502 5.3e-43 179.1 361 34.3
Gohir.A04G104400 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.2e-42 177.9 295 36.9
BcaC05g27500 Brassica carinata HOM05D005911 ORTHO05D007565 2.0e-42 177.2 326 35.6
Ciclev10029888m.g Citrus clementina HOM05D005911 ORTHO05D007565 2.6e-42 176.8 218 43.6
MCO11G507 Micromonas commoda HOM05D005911 ORTHO05D007565 4.5e-42 176.0 287 41.1
Hma1.2p1_0066F.1_g036670 Hydrangea macrophylla HOM05D005911 ORTHO05D007565 7.7e-42 175.3 321 34.3
Lsat_1_v5_gn_7_89660 Lactuca sativa HOM05D005911 ORTHO05D007565 1.3e-41 174.5 332 33.7
MELO3C012560.2 Cucumis melo HOM05D005911 ORTHO05D007565 2.9e-41 173.3 353 36.0
C05p34970 Brassica napus HOM05D005911 ORTHO05D007565 3.8e-41 172.9 319 35.7
CDE02G3889 Ceratophyllum demersum HOM05D005911 ORTHO05D007565 5.5e-40 169.1 280 37.5
Zm00001eb346550 Zea mays HOM05D005911 ORTHO05D007565 3.6e-39 166.4 316 35.4
Lj9A367G52 Lonicera japonica HOM05D005911 ORTHO05D007565 7.9e-39 165.2 295 35.6
Potri.004G151600 Populus trichocarpa HOM05D005911 ORTHO05D007565 1.0e-38 164.9 216 43.5
FAN27G2671 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.1e-37 161.4 152 50.0
BolC5t32198H Brassica oleracea HOM05D005911 ORTHO05D007565 1.7e-36 157.5 348 33.6
AL1G56510 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 7.0e-35 152.1 294 38.1
Sc14g0001910 Simmondsia chinensis HOM05D005911 ORTHO05D007565 1.5e-34 151.0 301 33.2
AagrBONN_evm.TU.Sc2ySwM_228.5516 Anthoceros agrestis HOM05D005911 ORTHO05D007565 3.7e-28 129.8 122 53.3
unitig_22.g6840 Utricularia gibba HOM05D005911 ORTHO05D007565 5.9e-26 122.5 324 28.7
CARHR039360 Cardamine hirsuta HOM05D005911 ORTHO05D007565 3.2e-24 116.7 219 37.0
Cre17.g701100 Chlamydomonas reinhardtii HOM05D005911 ORTHO05D007565 5.5e-24 115.9 143 44.8
PRCOL_00000481 Prasinoderma coloniale HOM05D005911 ORTHO05D007565 5.5e-24 115.9 285 31.2
SGA_v2.0_scaffold55G19804 Striga asiatica HOM05D005911 ORTHO05D007565 3.8e-17 93.2 214 33.2
Gorai.008G153200 Gossypium raimondii HOM05D005911 ORTHO05D007565 7.2e-16 89.0 127 38.6
Eucgr.G01892 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.8e-14 84.3 176 33.5
Ah.01g006180 Amaranthus hybridus HOM05D002934 ORTHO05D003937 1.3e-12 78.2 207 29.5
A05p20720 Brassica napus HOM05D005911 ORTHO05D007565 2.7e-10 70.5 146 33.6
BraA05t20979Z Brassica rapa HOM05D005911 ORTHO05D007565 2.7e-10 70.5 146 33.6
Nitab4.5_0000776g0050 Nicotiana tabacum HOM05D005911 ORTHO05D007565 1.9e-08 64.3 73 41.1
CARHR039340 Cardamine hirsuta HOM05D005911 ORTHO05D007565 7.2e-08 62.4 108 37.0
arahy.Tifrunner.gnm1.ann1.IUSJ9T Arachis hypogaea HOM05D005911 ORTHO05D007565 1.2e-07 61.6 72 40.3
CARHR039370 Cardamine hirsuta HOM05D005911 ORTHO05D007565 2.8e-07 60.5 69 44.9
Eucgr.G00468 Eucalyptus grandis HOM05D005911 ORTHO05D007565 4.7e-07 59.7 150 27.3


User provided reference genes

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