Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 1.0e-208 729.9 400 100.0
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 3.6e-97 359.4 404 55.0
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 4.4e-87 325.9 339 54.6
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 2.1e-76 290.4 416 44.2
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 1.3e-75 287.7 408 45.6
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 3.0e-75 286.6 411 47.4
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 1.1e-74 284.6 411 44.0
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 1.5e-74 284.3 408 43.6
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.5e-74 284.3 346 46.2
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 1.5e-74 284.3 407 44.0
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 2.5e-74 283.5 345 47.0
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 3.3e-74 283.1 375 44.8
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 4.3e-74 282.7 368 44.6
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 9.6e-74 281.6 371 44.2
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 2.1e-73 280.4 421 41.6
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 3.7e-73 279.6 368 43.2
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 3.7e-73 279.6 406 43.8
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 6.2e-73 278.9 346 46.8
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 8.1e-73 278.5 384 45.1
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.1e-72 278.1 381 44.6
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.4e-72 277.7 372 44.6
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 1.4e-72 277.7 380 44.7
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 2.4e-72 276.9 421 42.3
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 2.4e-72 276.9 424 43.2
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 5.3e-72 275.8 404 42.6
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 5.3e-72 275.8 365 48.5
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 5.3e-72 275.8 344 45.9
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 6.9e-72 275.4 349 45.8
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 6.9e-72 275.4 393 43.5
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 6.9e-72 275.4 378 45.5
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 9.0e-72 275.0 351 45.3
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 9.0e-72 275.0 402 42.5
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 9.0e-72 275.0 385 43.4
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 1.5e-71 274.2 404 42.8
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 1.5e-71 274.2 346 48.0
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 1.5e-71 274.2 408 42.2
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 1.5e-71 274.2 385 44.2
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 2.0e-71 273.9 430 41.2
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 2.0e-71 273.9 344 46.2
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 3.4e-71 273.1 406 43.8
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 3.4e-71 273.1 344 44.8
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 4.5e-71 272.7 412 42.7
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 5.8e-71 272.3 407 41.8
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 5.8e-71 272.3 418 42.6
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 1.0e-70 271.6 428 41.4
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.3e-70 271.2 390 43.6
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.7e-70 270.8 419 42.5
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 1.7e-70 270.8 413 41.4
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.2e-70 270.4 413 44.6
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 2.9e-70 270.0 344 45.6
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 2.9e-70 270.0 368 44.3
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.9e-70 270.0 361 45.7
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 8.4e-70 268.5 344 44.5
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.4e-69 267.7 366 43.4
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 1.4e-69 267.7 426 41.5
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.9e-69 267.3 397 42.3
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.9e-69 267.3 426 41.5
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 2.5e-69 266.9 347 44.4
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 3.2e-69 266.5 386 42.2
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 4.2e-69 266.2 411 40.9
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 5.5e-69 265.8 386 43.3
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 7.1e-69 265.4 420 40.2
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 7.1e-69 265.4 376 44.7
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 9.3e-69 265.0 413 42.1
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 1.6e-68 264.2 437 39.6
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 3.5e-68 263.1 345 45.5
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 4.6e-68 262.7 404 42.6
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 4.6e-68 262.7 379 43.0
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.0e-68 262.3 351 44.4
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 7.9e-68 261.9 413 41.4
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 7.9e-68 261.9 414 40.8
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.0e-67 261.5 351 44.4
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.8e-67 260.8 329 45.0
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 3.0e-67 260.0 409 41.1
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 3.0e-67 260.0 344 44.8
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.7e-67 258.8 351 44.2
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 8.7e-67 258.5 329 44.4
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 8.7e-67 258.5 329 44.4
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 8.7e-67 258.5 408 41.9
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.5e-66 257.7 371 42.6
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.5e-66 257.7 420 41.2
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.5e-66 257.7 437 38.2
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 3.3e-66 256.5 371 42.6
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 3.3e-66 256.5 353 42.8
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 3.3e-66 256.5 358 43.6
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.3e-66 256.1 345 44.1
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 2.8e-65 253.4 433 39.3
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 4.8e-65 252.7 409 39.9
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.8e-65 252.7 404 41.3
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 8.2e-65 251.9 347 43.2
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 1.1e-64 251.5 406 39.7
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.1e-64 251.5 345 43.8
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 1.8e-64 250.8 345 43.5
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 3.1e-64 250.0 400 41.8
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 2.6e-63 246.9 343 44.0
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 3.8e-62 243.0 405 39.3
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 3.8e-62 243.0 331 44.1
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 5.0e-62 242.7 413 40.4
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 3.6e-60 236.5 413 39.7
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 4.3e-58 229.6 389 39.6
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 1.6e-57 227.6 324 42.9
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 2.8e-57 226.9 408 39.2
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 6.9e-56 222.2 485 33.2
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 3.2e-53 213.4 416 37.0
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 1.8e-51 207.6 279 42.7
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 1.4e-48 198.0 363 36.4
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.5e-47 194.5 277 41.2
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 2.8e-41 173.7 222 50.0
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 9.4e-37 158.7 301 38.2
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 1.8e-35 154.5 286 37.8
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 3.8e-30 136.7 478 28.7
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 6.5e-30 136.0 282 36.2
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.3e-25 121.7 87 65.5
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.2e-20 105.1 373 26.8
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 2.0e-18 97.8 125 44.0
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 3.4e-18 97.1 148 41.9
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 3.5e-15 87.0 199 36.2
SMO147G0246 Selaginella moellendorffii HOM05D045655 ORTHO05D007767 6.6e-06 56.2 61 45.9


User provided reference genes

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