Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 2.3e-157 558.9 299 100.0
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 4.4e-79 298.9 202 69.3
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 4.8e-78 295.4 205 67.3
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.1e-77 292.7 255 56.9
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 9.1e-77 291.2 255 58.8
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 2.0e-76 290.0 242 60.3
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 2.6e-76 289.7 232 60.3
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 5.9e-76 288.5 237 58.6
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.3e-75 287.3 208 66.8
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.3e-75 287.3 233 60.5
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 1.3e-75 287.3 299 55.2
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 2.2e-75 286.6 255 58.0
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 2.9e-75 286.2 208 66.8
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 2.9e-75 286.2 260 60.0
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 6.5e-75 285.0 237 60.3
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 6.5e-75 285.0 205 64.4
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 6.5e-75 285.0 204 65.2
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 8.5e-75 284.6 236 59.3
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.4e-74 283.9 243 60.9
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.4e-74 283.9 243 60.9
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.4e-74 283.9 204 66.2
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 1.9e-74 283.5 206 66.5
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.9e-74 283.5 236 58.9
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.5e-74 283.1 206 62.1
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.5e-74 283.1 204 63.7
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 3.2e-74 282.7 243 58.4
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 3.2e-74 282.7 235 57.9
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 3.2e-74 282.7 205 63.9
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 4.2e-74 282.3 243 58.4
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 4.2e-74 282.3 206 66.5
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 4.2e-74 282.3 203 65.0
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 5.5e-74 282.0 254 57.1
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 7.2e-74 281.6 236 59.3
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 7.2e-74 281.6 204 65.2
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 7.2e-74 281.6 244 58.2
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 7.2e-74 281.6 244 58.2
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 7.2e-74 281.6 255 57.3
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 7.2e-74 281.6 242 58.7
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 9.4e-74 281.2 206 64.6
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 9.4e-74 281.2 254 57.1
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 9.4e-74 281.2 233 57.5
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 9.4e-74 281.2 203 66.0
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 1.2e-73 280.8 243 58.4
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.6e-73 280.4 202 64.4
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 2.1e-73 280.0 206 63.6
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 2.1e-73 280.0 204 64.7
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 2.1e-73 280.0 239 59.8
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 2.7e-73 279.6 202 64.9
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 2.7e-73 279.6 204 64.2
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 3.6e-73 279.3 201 64.7
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 4.7e-73 278.9 201 63.2
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 4.7e-73 278.9 244 56.6
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 4.7e-73 278.9 286 56.3
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 4.7e-73 278.9 205 63.4
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 4.7e-73 278.9 205 63.4
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 6.1e-73 278.5 209 62.7
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 6.1e-73 278.5 238 60.5
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 8.0e-73 278.1 240 58.8
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 8.0e-73 278.1 241 56.4
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.0e-72 277.7 252 55.2
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.0e-72 277.7 202 65.3
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.0e-72 277.7 210 62.4
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 1.4e-72 277.3 270 54.1
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.4e-72 277.3 255 54.9
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.8e-72 276.9 241 56.4
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.8e-72 276.9 242 56.2
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 1.8e-72 276.9 289 51.2
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.8e-72 276.9 236 57.2
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.0e-72 276.2 202 64.9
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 5.2e-72 275.4 295 51.2
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 5.2e-72 275.4 211 61.6
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 6.7e-72 275.0 289 53.6
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 6.7e-72 275.0 237 57.0
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 6.7e-72 275.0 242 55.8
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 6.7e-72 275.0 206 64.1
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 6.7e-72 275.0 234 59.4
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 8.8e-72 274.6 238 56.7
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 8.8e-72 274.6 290 51.4
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.1e-71 274.2 232 57.3
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.1e-71 274.2 243 57.6
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 1.5e-71 273.9 205 62.0
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 1.5e-71 273.9 201 64.7
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 2.0e-71 273.5 204 62.3
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 4.4e-71 272.3 236 57.2
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 4.4e-71 272.3 202 63.4
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 5.7e-71 271.9 206 63.6
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 7.4e-71 271.6 276 51.4
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 9.7e-71 271.2 292 50.3
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 2.2e-70 270.0 209 62.7
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 3.7e-70 269.2 273 51.6
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 3.7e-70 269.2 232 56.9
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.8e-69 266.9 226 58.4
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 4.1e-69 265.8 235 57.4
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.1e-69 265.8 209 60.8
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.1e-69 265.8 209 60.8
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.1e-69 265.8 209 60.8
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 5.3e-69 265.4 209 60.8
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 5.9e-68 261.9 280 50.4
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 2.9e-67 259.6 256 52.7
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.5e-66 257.3 216 56.5
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 2.1e-65 253.4 226 55.3
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 6.7e-64 248.4 315 44.1
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 3.5e-60 236.1 197 57.9
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 8.8e-56 221.5 232 48.3
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.5e-50 203.4 140 65.7
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 5.5e-50 202.2 210 51.4
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 9.5e-50 201.4 152 60.5
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.1e-49 200.3 248 46.0
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 8.3e-30 135.2 216 38.0
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 2.4e-29 133.7 151 46.4
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.9e-26 124.0 253 38.3
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 3.4e-23 113.2 185 40.5
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 7.1e-21 105.5 60 75.0
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 2.7e-20 103.6 171 39.8
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.5e-18 97.1 79 60.8
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 8.1e-17 92.0 131 37.4
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 2.2e-14 84.0 79 54.4
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 6.2e-09 65.9 85 42.4
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 1.2e-07 61.6 113 37.2
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 8.4e-06 55.5 77 40.3


User provided reference genes

Program Settings