Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 9.2e-89 330.5 204 100.0
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 1.0e-34 151.0 133 57.9
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 6.5e-34 148.3 137 52.6
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 1.1e-33 147.5 135 54.1
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 3.2e-33 146.0 135 53.3
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 3.2e-33 146.0 133 52.6
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 7.2e-33 144.8 137 53.3
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 7.2e-33 144.8 137 53.3
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 7.2e-33 144.8 137 52.6
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 7.2e-33 144.8 137 51.1
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 9.4e-33 144.4 135 52.6
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 2.1e-32 143.3 135 54.8
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 2.7e-32 142.9 137 51.8
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 2.7e-32 142.9 134 51.5
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 2.7e-32 142.9 135 52.6
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 4.6e-32 142.1 133 51.1
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 4.6e-32 142.1 134 52.2
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 4.6e-32 142.1 137 50.4
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 4.6e-32 142.1 133 54.1
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 6.1e-32 141.7 135 50.4
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 6.1e-32 141.7 137 51.8
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 1.0e-31 141.0 137 50.4
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 2.3e-31 139.8 135 51.1
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 3.0e-31 139.4 134 52.2
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 3.9e-31 139.0 130 51.5
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 3.9e-31 139.0 135 51.1
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 5.1e-31 138.7 135 51.9
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 6.7e-31 138.3 134 48.5
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 6.7e-31 138.3 134 53.7
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 8.8e-31 137.9 135 51.1
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 1.5e-30 137.1 133 51.1
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 1.5e-30 137.1 134 53.0
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 1.5e-30 137.1 133 54.1
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 2.0e-30 136.7 139 48.9
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 2.0e-30 136.7 139 48.9
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 2.0e-30 136.7 131 51.9
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 2.6e-30 136.3 135 50.4
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 2.6e-30 136.3 137 48.9
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 3.3e-30 136.0 134 52.2
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 5.7e-30 135.2 135 47.4
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 5.7e-30 135.2 138 52.2
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 7.4e-30 134.8 135 46.7
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 9.7e-30 134.4 137 48.9
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 9.7e-30 134.4 133 48.1
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 9.7e-30 134.4 131 50.4
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 9.7e-30 134.4 133 48.9
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.3e-29 134.0 135 48.9
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 1.3e-29 134.0 134 50.0
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 1.7e-29 133.7 137 49.6
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 2.2e-29 133.3 137 48.2
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 2.2e-29 133.3 130 52.3
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 2.2e-29 133.3 133 50.4
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.2e-29 133.3 132 50.0
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 2.8e-29 132.9 133 50.4
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 3.7e-29 132.5 118 55.1
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 3.7e-29 132.5 135 48.1
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 4.8e-29 132.1 129 51.9
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 4.8e-29 132.1 134 48.5
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 4.8e-29 132.1 134 47.8
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 6.3e-29 131.7 133 48.1
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 8.2e-29 131.3 132 49.2
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 8.2e-29 131.3 131 48.9
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 1.1e-28 131.0 131 48.9
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 1.1e-28 131.0 134 47.8
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 1.4e-28 130.6 132 48.5
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.4e-28 130.6 134 47.8
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 1.8e-28 130.2 134 47.8
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 1.8e-28 130.2 134 49.3
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 5.3e-28 128.6 135 46.7
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 5.3e-28 128.6 135 46.7
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 5.3e-28 128.6 132 45.5
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 9.1e-28 127.9 133 47.4
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.2e-27 127.5 134 46.3
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.5e-27 127.1 132 48.5
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 1.5e-27 127.1 134 46.3
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 2.6e-27 126.3 135 47.4
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.6e-27 126.3 132 48.5
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 3.4e-27 125.9 133 48.1
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 5.9e-27 125.2 127 48.0
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 1.0e-26 124.4 134 44.8
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.3e-26 124.0 133 50.4
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 1.7e-26 123.6 127 49.6
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 1.7e-26 123.6 135 42.2
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 6.5e-26 121.7 89 59.6
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.4e-25 120.6 132 43.9
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 4.2e-25 119.0 132 46.2
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 7.2e-25 118.2 118 48.3
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 3.6e-24 115.9 135 44.4
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 4.7e-24 115.5 122 48.4
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 1.0e-23 114.4 135 42.2
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 1.0e-23 114.4 131 43.5
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 5.2e-23 112.1 91 56.0
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 1.5e-22 110.5 134 49.3
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 2.0e-22 110.2 134 44.0
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 2.2e-21 106.7 112 44.6
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 4.8e-21 105.5 133 45.1
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 1.1e-20 104.4 88 48.9
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 1.1e-20 104.4 87 48.3
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 1.4e-20 104.0 88 50.0
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.6e-19 100.5 126 44.4
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 3.5e-19 99.4 95 53.7
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 2.9e-18 96.3 129 43.4
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 4.7e-16 89.0 97 48.5
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 2.7e-11 73.2 115 38.3
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 4.5e-11 72.4 111 39.6
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 2.1e-08 63.5 83 43.4
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 4.0e-07 59.3 79 41.8


User provided reference genes

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