Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 2.2e-47 192.2 115 100.0
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 2.9e-15 85.5 111 49.5
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 1.1e-14 83.6 114 49.1
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 1.4e-14 83.2 115 45.2
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 1.4e-14 83.2 115 45.2
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 3.2e-14 82.0 116 47.4
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.2e-14 82.0 115 46.1
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 7.2e-14 80.9 115 40.9
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 9.4e-14 80.5 115 40.9
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 9.4e-14 80.5 116 42.2
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 9.4e-14 80.5 114 43.0
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 9.4e-14 80.5 117 46.2
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 9.4e-14 80.5 117 42.7
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 9.4e-14 80.5 115 40.9
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 1.6e-13 79.7 114 45.6
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.1e-13 79.3 115 45.2
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.1e-13 79.3 116 42.2
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.1e-13 79.3 115 44.3
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 2.1e-13 79.3 113 45.1
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 2.1e-13 79.3 113 45.1
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 2.7e-13 79.0 115 52.2
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.7e-13 79.0 115 52.2
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 2.7e-13 79.0 117 41.0
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 2.7e-13 79.0 115 52.2
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 2.7e-13 79.0 115 48.7
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 3.6e-13 78.6 115 40.9
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 4.6e-13 78.2 114 38.6
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 4.6e-13 78.2 118 43.2
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.6e-13 78.2 114 47.4
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 4.6e-13 78.2 115 52.2
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 4.6e-13 78.2 115 47.0
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 6.1e-13 77.8 118 43.2
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 7.9e-13 77.4 114 45.6
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 7.9e-13 77.4 115 43.5
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.0e-12 77.0 115 43.5
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.0e-12 77.0 118 44.9
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.0e-12 77.0 114 37.7
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 1.4e-12 76.6 115 50.4
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.4e-12 76.6 114 39.5
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 1.8e-12 76.3 117 41.0
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.8e-12 76.3 114 49.1
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 2.3e-12 75.9 114 43.9
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 2.3e-12 75.9 114 49.1
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 2.3e-12 75.9 114 43.9
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 3.0e-12 75.5 118 50.0
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 3.0e-12 75.5 118 50.0
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 3.0e-12 75.5 114 43.0
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 3.9e-12 75.1 115 45.2
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 5.1e-12 74.7 114 44.7
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 5.1e-12 74.7 118 45.8
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 5.1e-12 74.7 110 45.5
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 6.7e-12 74.3 115 51.3
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 8.8e-12 73.9 115 48.7
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 8.8e-12 73.9 114 46.5
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 1.1e-11 73.6 118 49.2
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 1.1e-11 73.6 118 49.2
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.1e-11 73.6 114 46.5
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.5e-11 73.2 111 52.3
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.5e-11 73.2 115 50.4
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.0e-11 72.8 115 44.3
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 2.0e-11 72.8 106 48.1
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 2.0e-11 72.8 115 50.4
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 2.5e-11 72.4 115 48.7
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 2.5e-11 72.4 115 48.7
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 2.5e-11 72.4 107 51.4
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 3.3e-11 72.0 103 57.3
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 3.3e-11 72.0 115 51.3
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 4.3e-11 71.6 114 46.5
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 5.7e-11 71.2 116 50.0
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 5.7e-11 71.2 114 44.7
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 7.4e-11 70.9 115 45.2
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 7.4e-11 70.9 122 36.1
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 9.7e-11 70.5 112 42.0
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 9.7e-11 70.5 106 46.2
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 1.3e-10 70.1 112 42.0
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.7e-10 69.7 122 36.9
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.7e-10 69.7 115 43.5
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 2.2e-10 69.3 103 43.7
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 2.8e-10 68.9 106 45.3
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 2.8e-10 68.9 115 43.5
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 2.8e-10 68.9 126 35.7
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 2.8e-10 68.9 114 40.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 2.8e-10 68.9 117 40.2
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 4.8e-10 68.2 118 49.2
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 6.3e-10 67.8 112 36.6
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 6.3e-10 67.8 115 46.1
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 6.3e-10 67.8 109 42.2
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 8.2e-10 67.4 115 45.2
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 8.2e-10 67.4 109 43.1
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 1.1e-09 67.0 123 36.6
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.4e-09 66.6 114 50.9
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.8e-09 66.2 112 49.1
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.8e-09 66.2 112 49.1
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 1.8e-09 66.2 114 40.4
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.8e-09 66.2 115 49.6
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 2.4e-09 65.9 114 44.7
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 3.1e-09 65.5 109 37.6
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 4.1e-09 65.1 121 35.5
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 4.1e-09 65.1 118 51.7
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 4.1e-09 65.1 110 55.5
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 6.9e-09 64.3 115 37.4
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 9.1e-09 63.9 115 43.5
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 9.1e-09 63.9 115 49.6
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.2e-08 63.5 113 36.3
MCO12G274 Micromonas commoda HOM05D006768 ORTHO05D008436 1.7e-07 59.7 110 41.8
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 2.2e-07 59.3 101 41.6
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.9e-07 58.9 101 50.5
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 5.0e-07 58.2 120 50.0
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 8.5e-07 57.4 119 45.4
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.1e-06 57.0 67 43.3
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 1.4e-06 56.6 71 43.7
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.4e-06 56.6 103 38.8


User provided reference genes

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