Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 2.4e-201 705.3 352 100.0
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.4e-116 423.7 336 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 3.0e-111 406.0 328 59.5
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.5e-107 393.7 333 60.4
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 4.4e-107 392.1 335 58.5
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 1.7e-106 390.2 336 57.4
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 6.4e-106 388.3 336 58.9
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 6.4e-106 388.3 336 60.7
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 3.2e-105 386.0 333 59.2
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 4.2e-105 385.6 334 59.0
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 5.4e-105 385.2 334 60.8
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 1.2e-104 384.0 334 59.9
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.2e-104 384.0 334 58.7
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 1.2e-104 384.0 331 61.0
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 1.2e-104 384.0 335 59.1
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.1e-104 383.3 334 59.9
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 2.1e-104 383.3 334 60.8
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 2.7e-104 382.9 335 59.1
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 6.0e-104 381.7 331 60.4
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 6.0e-104 381.7 334 59.6
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 6.0e-104 381.7 334 59.9
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 7.9e-104 381.3 335 59.4
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 1.3e-103 380.6 336 57.7
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 1.3e-103 380.6 335 59.1
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 1.7e-103 380.2 331 60.1
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 1.7e-103 380.2 333 58.6
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 1.7e-103 380.2 335 59.4
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.7e-103 380.2 334 59.9
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 2.3e-103 379.8 336 58.9
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 3.0e-103 379.4 333 58.6
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 3.0e-103 379.4 331 59.8
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 3.0e-103 379.4 331 59.8
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 3.0e-103 379.4 334 59.3
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 3.9e-103 379.0 333 59.2
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 3.9e-103 379.0 331 59.8
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 3.9e-103 379.0 339 57.2
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 5.1e-103 378.6 335 57.6
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 5.1e-103 378.6 332 57.8
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 6.6e-103 378.3 332 59.3
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 8.7e-103 377.9 331 60.1
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 8.7e-103 377.9 333 58.0
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 8.7e-103 377.9 334 59.6
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 1.1e-102 377.5 331 59.2
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 1.1e-102 377.5 331 59.2
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.9e-102 376.7 332 59.0
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 1.9e-102 376.7 335 58.2
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 1.9e-102 376.7 335 57.6
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.5e-102 376.3 334 59.0
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 2.5e-102 376.3 334 59.0
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 2.5e-102 376.3 334 57.8
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 3.3e-102 375.9 334 59.3
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 5.6e-102 375.2 339 58.4
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 7.4e-102 374.8 331 58.9
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 9.6e-102 374.4 334 58.4
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 9.6e-102 374.4 334 57.8
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 9.6e-102 374.4 331 59.2
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 1.3e-101 374.0 335 58.2
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 1.6e-101 373.6 332 58.1
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 2.1e-101 373.2 334 59.3
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 3.6e-101 372.5 335 57.6
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 3.6e-101 372.5 335 57.3
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 6.2e-101 371.7 333 57.4
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 6.2e-101 371.7 339 56.6
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 1.1e-100 370.9 334 58.7
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.8e-100 370.2 333 58.0
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 2.4e-100 369.8 335 58.5
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 2.4e-100 369.8 334 56.6
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 2.4e-100 369.8 334 56.6
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 2.4e-100 369.8 335 58.2
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 3.1e-100 369.4 334 59.0
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 4.0e-100 369.0 333 58.0
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 5.3e-100 368.6 334 56.6
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 5.3e-100 368.6 334 57.5
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 9.0e-100 367.9 334 57.5
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 2.6e-99 366.3 323 58.5
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 2.6e-99 366.3 334 56.3
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.6e-99 366.3 333 57.7
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 3.4e-99 365.9 332 57.2
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 4.5e-99 365.5 362 53.6
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 5.8e-99 365.2 339 57.8
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 5.8e-99 365.2 337 57.6
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 7.6e-99 364.8 335 57.3
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 7.6e-99 364.8 332 58.4
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.3e-98 364.0 334 58.1
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 1.3e-98 364.0 335 58.8
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.3e-98 364.0 337 57.6
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 2.9e-98 362.8 329 58.4
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.1e-97 360.9 362 53.0
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 1.9e-97 360.1 334 57.2
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 2.1e-96 356.7 319 57.1
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.7e-96 356.3 349 55.3
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.3e-94 349.4 334 54.8
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 1.6e-93 347.1 333 54.7
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 2.6e-91 339.7 353 53.0
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 2.2e-90 336.7 333 53.5
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 1.4e-89 334.0 407 47.2
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 2.7e-88 329.7 276 60.5
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.3e-87 327.4 332 48.8
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.8e-87 327.0 331 49.8
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.9e-87 325.9 342 49.1
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 5.1e-87 325.5 332 49.1
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.9e-86 323.6 334 51.5
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 2.5e-86 323.2 330 49.1
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 7.4e-86 321.6 332 48.5
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 2.8e-85 319.7 332 47.6
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 3.1e-84 316.2 287 58.2
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 6.9e-84 315.1 328 49.4
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 6.9e-84 315.1 331 48.3
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 4.5e-83 312.4 342 46.2
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 2.9e-82 309.7 347 47.3
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 3.8e-82 309.3 332 46.1
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 8.4e-82 308.1 332 48.2
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.2e-81 306.2 290 57.6
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 7.2e-81 305.1 331 47.7
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 1.6e-80 303.9 334 49.4
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-80 303.5 341 46.3
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 3.5e-80 302.8 331 47.7
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 5.1e-79 298.9 334 48.2
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 4.8e-77 292.4 348 48.3
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 8.2e-77 291.6 325 48.0
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.8e-76 290.4 341 45.2
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 2.6e-75 286.6 342 44.7
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 2.3e-71 273.5 358 45.3
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 2.5e-70 270.0 235 59.6
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.2e-69 266.9 230 60.9
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.8e-68 263.8 338 41.1
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-66 258.1 266 48.1
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 1.7e-66 257.3 332 41.0
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 2.2e-61 240.4 224 59.4
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 4.4e-54 216.1 236 50.4
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-53 214.5 217 48.8
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 8.3e-45 185.3 149 63.1
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 7.0e-44 182.2 197 47.2
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 5.5e-41 172.6 179 48.0
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.6e-40 171.0 331 34.4
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.4e-36 157.9 150 56.0
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.3e-34 151.4 185 49.2
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 5.0e-34 149.4 146 55.5
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 4.3e-33 146.4 179 49.2
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 5.7e-30 136.0 370 31.9
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 3.7e-29 133.3 136 53.7
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 3.2e-28 130.2 104 58.7
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 3.5e-27 126.7 223 38.6
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 1.0e-26 125.2 355 31.0
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 6.6e-26 122.5 323 30.0
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 4.3e-25 119.8 132 51.5
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 6.2e-24 115.9 357 30.3
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 2.3e-23 114.0 96 55.2
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.3e-21 108.2 357 30.5
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 3.7e-21 106.7 161 39.8
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 1.2e-16 91.7 340 27.6
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 8.9e-15 85.5 74 51.4
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 9.8e-14 82.0 144 41.0
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 4.1e-12 76.6 58 63.8
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 7.1e-12 75.9 72 51.4
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 2.7e-11 73.9 72 43.1
PRCOL_00002754 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 3.5e-11 73.6 133 36.8
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 8.6e-10 68.9 56 62.5
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 8.6e-10 68.9 86 46.5
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.9e-09 67.8 162 32.1
TPR.G10092 Trifolium pratense HOM05D004164 ORTHO05D004891 4.3e-09 66.6 70 47.1
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.2e-08 65.1 58 53.4
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.8e-08 63.9 44 65.9
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 1.4e-07 61.6 50 60.0


User provided reference genes

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