Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 2.0e-178 629.0 323 100.0
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 1.1e-67 261.2 204 67.2
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 1.2e-66 257.7 262 53.1
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 1.2e-66 257.7 262 53.1
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 1.2e-66 257.7 232 59.1
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 2.7e-66 256.5 215 64.2
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 7.8e-66 255.0 213 62.4
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 3.0e-65 253.1 229 59.8
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 3.0e-65 253.1 209 63.2
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 5.0e-65 252.3 219 60.3
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 8.6e-65 251.5 236 57.2
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 8.6e-65 251.5 226 60.2
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.1e-64 251.1 216 62.0
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.1e-64 251.1 230 59.1
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 1.5e-64 250.8 207 62.3
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 1.5e-64 250.8 219 60.3
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.9e-64 250.4 206 63.6
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 2.5e-64 250.0 207 61.8
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 2.5e-64 250.0 258 54.3
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 3.3e-64 249.6 220 61.8
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 3.3e-64 249.6 207 61.8
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 5.6e-64 248.8 224 58.9
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 5.6e-64 248.8 254 55.5
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 7.3e-64 248.4 227 57.7
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 9.5e-64 248.1 219 59.8
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 1.2e-63 247.7 209 62.7
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 2.1e-63 246.9 207 61.4
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 2.8e-63 246.5 232 56.5
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 2.8e-63 246.5 207 61.8
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 4.7e-63 245.7 206 60.7
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 8.1e-63 245.0 233 57.1
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.4e-62 244.2 236 55.9
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.4e-62 244.2 208 61.5
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 1.8e-62 243.8 220 59.5
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 2.3e-62 243.4 204 60.8
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 4.0e-62 242.7 227 56.8
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 4.0e-62 242.7 228 57.9
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 4.0e-62 242.7 206 61.7
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 6.8e-62 241.9 252 53.6
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 8.9e-62 241.5 231 58.9
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 1.2e-61 241.1 243 54.3
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 1.2e-61 241.1 207 60.9
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.2e-61 241.1 207 60.9
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 1.5e-61 240.7 231 57.6
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.5e-61 240.7 220 58.2
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 1.5e-61 240.7 205 61.5
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 2.6e-61 240.0 230 59.1
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 2.6e-61 240.0 205 61.5
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 3.4e-61 239.6 222 58.1
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 3.4e-61 239.6 219 59.4
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 3.4e-61 239.6 206 61.2
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 4.4e-61 239.2 206 60.2
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 7.5e-61 238.4 206 60.7
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 7.5e-61 238.4 252 55.2
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 7.5e-61 238.4 263 49.8
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 9.9e-61 238.0 209 59.3
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 9.9e-61 238.0 252 55.6
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.3e-60 237.7 229 57.2
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 1.3e-60 237.7 207 59.4
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 1.3e-60 237.7 228 57.5
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 1.3e-60 237.7 208 60.6
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 1.7e-60 237.3 205 59.0
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 2.2e-60 236.9 206 58.7
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 2.2e-60 236.9 234 55.6
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 3.7e-60 236.1 207 59.9
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 6.4e-60 235.3 252 51.6
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 8.3e-60 235.0 232 55.6
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.4e-59 234.2 232 55.2
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 1.9e-59 233.8 209 58.9
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.9e-59 233.8 209 58.9
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.9e-59 233.8 209 58.9
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 2.4e-59 233.4 216 56.9
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 5.4e-59 232.3 220 56.4
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 9.2e-59 231.5 202 58.9
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.2e-58 231.1 231 57.1
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.6e-58 230.7 206 58.7
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 2.1e-58 230.3 234 54.7
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 7.8e-58 228.4 232 56.9
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.0e-57 228.0 225 56.0
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 1.7e-57 227.3 248 53.2
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 2.3e-57 226.9 222 54.5
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 2.3e-57 226.9 274 48.2
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 3.9e-57 226.1 235 52.8
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 1.6e-55 220.7 206 55.3
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 6.2e-55 218.8 210 54.8
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.8e-54 217.2 219 52.5
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 6.8e-54 215.3 282 46.8
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 2.0e-53 213.8 317 42.3
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 1.3e-52 211.1 280 45.7
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 4.9e-52 209.1 222 54.5
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.4e-51 207.6 191 57.6
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 9.2e-51 204.9 231 49.4
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.3e-49 201.1 246 47.2
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 1.5e-48 197.6 191 58.1
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 5.6e-48 195.7 241 47.3
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 7.3e-48 195.3 348 39.4
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 8.1e-47 191.8 149 67.8
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.1e-46 191.4 160 61.9
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 1.5e-45 187.6 193 54.4
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 4.4e-45 186.0 181 55.2
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 3.6e-39 166.4 165 56.4
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 5.4e-35 152.5 139 61.2
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.3e-33 147.1 135 58.5
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 1.5e-32 144.4 134 59.7
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.8e-31 140.2 187 47.6
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.9e-27 127.5 115 60.9
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 2.7e-26 123.6 110 60.9
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 2.9e-20 103.6 74 67.6
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 4.2e-19 99.8 73 67.1
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 5.1e-17 92.8 338 26.9
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 1.0e-12 78.6 187 32.1
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 6.5e-12 75.9 95 48.4
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 7.4e-08 62.4 154 32.5
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 4.8e-07 59.7 220 27.7


User provided reference genes

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