Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 3.9e-188 661.4 352 100.0
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.6e-117 426.8 324 67.0
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 4.0e-116 422.2 330 66.1
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 3.4e-115 419.1 324 66.4
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.3e-114 417.2 327 65.7
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.3e-114 417.2 327 65.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.9e-114 416.0 330 65.5
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 4.9e-114 415.2 330 63.9
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.1e-113 414.1 330 64.5
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 2.4e-113 412.9 330 65.2
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 3.2e-113 412.5 330 63.6
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 7.1e-113 411.4 324 64.8
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 9.3e-113 411.0 329 63.8
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 1.2e-112 410.6 324 65.1
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.6e-112 410.2 330 64.2
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.6e-112 410.2 330 63.9
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.1e-112 409.8 326 65.3
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 2.1e-112 409.8 330 63.9
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 3.5e-112 409.1 327 63.6
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.5e-112 409.1 324 65.1
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 3.5e-112 409.1 330 63.9
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 4.6e-112 408.7 324 64.8
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 7.8e-112 407.9 333 62.5
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.8e-112 407.9 324 64.8
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.3e-111 407.1 324 65.4
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 1.3e-111 407.1 330 63.3
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 1.7e-111 406.8 324 64.5
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 1.7e-111 406.8 324 63.9
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 1.7e-111 406.8 330 63.9
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 3.0e-111 406.0 330 63.3
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 3.0e-111 406.0 330 63.3
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 3.0e-111 406.0 329 62.9
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 3.9e-111 405.6 330 62.7
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.9e-111 405.6 324 63.6
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.9e-111 405.6 324 63.6
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.1e-111 405.2 324 63.6
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 5.1e-111 405.2 330 63.3
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 5.1e-111 405.2 324 64.2
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 8.7e-111 404.4 330 61.8
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.1e-110 404.1 331 63.1
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.1e-110 404.1 331 62.8
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.5e-110 402.9 330 62.7
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 3.3e-110 402.5 330 62.1
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 3.3e-110 402.5 324 63.3
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.3e-110 402.5 331 62.5
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 4.3e-110 402.1 330 62.1
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 4.3e-110 402.1 336 62.8
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 4.3e-110 402.1 330 62.1
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 5.6e-110 401.7 326 63.5
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 5.6e-110 401.7 330 62.1
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 5.6e-110 401.7 330 62.1
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 5.6e-110 401.7 330 62.1
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 5.6e-110 401.7 330 62.1
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.6e-110 401.7 331 62.5
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 9.6e-110 401.0 330 62.1
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 9.6e-110 401.0 326 63.8
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.3e-109 400.6 330 61.8
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.3e-109 400.6 330 62.7
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 1.3e-109 400.6 329 62.6
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.3e-109 400.6 326 63.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.6e-109 400.2 327 62.7
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 1.6e-109 400.2 330 61.5
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.1e-109 399.8 324 63.6
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 2.8e-109 399.4 329 62.3
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 2.8e-109 399.4 330 63.6
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.8e-109 399.4 330 61.2
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.8e-109 399.4 316 63.9
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 3.6e-109 399.1 324 62.7
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.8e-109 398.7 324 62.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 4.8e-109 398.7 325 63.4
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 6.2e-109 398.3 324 62.0
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.2e-109 398.3 324 63.0
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.1e-109 397.9 330 62.7
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 8.1e-109 397.9 324 63.3
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.1e-108 397.5 326 62.3
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.4e-108 397.1 330 61.2
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.4e-108 397.1 327 62.7
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.8e-108 396.7 321 63.2
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 2.4e-108 396.4 324 63.3
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.4e-108 396.4 325 63.1
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.1e-108 396.0 330 60.9
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 4.0e-108 395.6 324 62.3
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 4.0e-108 395.6 329 62.3
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 4.0e-108 395.6 330 62.1
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 6.9e-108 394.8 365 58.6
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 6.9e-108 394.8 329 61.7
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 9.0e-108 394.4 325 62.8
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.2e-107 394.0 329 62.0
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.5e-107 393.7 330 61.5
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.4e-107 392.5 330 62.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 5.8e-107 391.7 330 60.9
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 2.2e-106 389.8 330 61.2
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 2.9e-106 389.4 330 60.3
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 8.4e-106 387.9 324 60.8
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.9e-105 386.7 330 60.9
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.9e-105 386.7 357 57.1
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.4e-105 386.3 330 61.2
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 3.2e-105 386.0 331 61.0
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.3e-105 384.4 307 65.1
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.6e-104 383.6 378 56.1
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 2.7e-104 382.9 284 67.3
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-103 380.6 330 59.7
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.3e-103 379.8 324 60.2
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 6.6e-103 378.3 324 61.4
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.6e-101 373.6 330 59.1
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 9.9e-99 364.4 336 59.2
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 2.7e-96 356.3 273 65.2
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 4.8e-93 345.5 330 57.9
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.0e-91 340.1 324 57.1
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.4e-91 339.3 305 59.7
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 3.4e-91 339.3 283 62.2
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.4e-90 334.7 376 51.3
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 1.9e-89 333.6 330 54.8
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 3.9e-87 325.9 325 55.4
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.6e-85 320.5 325 54.5
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.4e-81 307.4 350 47.7
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 9.3e-81 304.7 329 52.9
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.5e-78 296.6 228 64.9
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.1e-76 291.2 229 64.2
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 7.7e-67 258.5 196 66.8
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 1.1e-65 254.6 275 50.5
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.1e-65 254.6 238 54.6
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 3.6e-64 249.6 320 44.7
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 5.7e-62 242.3 223 60.5
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.7e-61 240.7 158 74.7
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.4e-60 237.7 223 59.6
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.2e-59 234.6 335 46.6
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.6e-59 233.4 226 55.8
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 3.8e-58 229.6 223 58.7
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 2.7e-51 206.8 334 41.0
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 7.2e-49 198.7 263 46.8
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 2.4e-44 183.7 168 58.3
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.9e-41 174.1 171 54.4
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.7e-35 153.7 146 55.5
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.7e-34 151.0 330 35.2
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.2e-29 134.0 127 55.9
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 3.7e-29 133.3 169 49.1
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 3.0e-26 123.6 172 39.0
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 7.3e-25 119.0 114 56.1
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-24 118.2 106 56.6
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.8e-23 114.4 88 62.5
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 7.5e-22 109.0 67 73.1
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 9.8e-22 108.6 81 63.0
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 2.9e-21 107.1 80 65.0
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 4.3e-17 93.2 168 38.1
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 4.3e-17 93.2 75 56.0
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 7.3e-17 92.4 95 52.6
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 9.5e-17 92.0 65 64.6
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.1e-16 90.9 94 52.1
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 4.7e-16 89.7 69 62.3
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 8.1e-16 89.0 64 62.5
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.1e-15 88.6 69 63.8
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.4e-14 83.2 83 53.0


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