Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0041s0089 Marchantia polymorpha HOM05D003560 ORTHO05D004500 0.0e+00 2202.9 1139 100.0
Pp3c19_12090 Physcomitrium patens HOM05D003560 ORTHO05D004500 2.6e-289 999.2 1187 50.3
Pp3c22_15890 Physcomitrium patens HOM05D003560 ORTHO05D004500 1.7e-288 996.5 1201 49.8
SMO301G0012 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 1.5e-268 930.2 1158 48.3
Aqoxy7G03346 Aquilegia oxysepala HOM05D003560 ORTHO05D004500 9.3e-247 857.8 1160 44.5
TAR636G2626 Trochodendron aralioides HOM05D003560 ORTHO05D004500 2.4e-242 843.2 1165 44.5
AagrBONN_evm.TU.Sc2ySwM_344.4294 Anthoceros agrestis HOM05D003560 ORTHO05D004500 4.5e-241 839.0 1180 44.9
TAR625G0571 Trochodendron aralioides HOM05D003560 ORTHO05D004500 3.0e-237 826.2 1161 43.7
Nn2g14025 Nelumbo nucifera HOM05D003560 ORTHO05D004500 1.9e-236 823.5 1160 43.1
PSO782G3416 Papaver somniferum HOM05D003560 ORTHO05D004500 5.3e-234 815.5 1169 42.9
PSO063G7271 Papaver somniferum HOM05D003560 ORTHO05D004500 6.9e-234 815.1 1169 42.9
Hund08956 Selenicereus undatus HOM05D003560 ORTHO05D004500 9.0e-234 814.7 1159 43.1
Hma1.2p1_0222F.1_g093890 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.7e-232 810.4 1191 42.8
SEGI_31223 Sequoiadendron giganteum HOM05D003560 ORTHO05D004500 1.7e-232 810.4 1159 43.0
Manes.06G031700 Manihot esculenta HOM05D003560 ORTHO05D004500 1.4e-231 807.4 1166 43.2
Migut.J01389 Erythranthe guttata HOM05D003560 ORTHO05D004500 7.1e-231 805.1 1142 41.9
AUR62028380 Chenopodium quinoa HOM05D003560 ORTHO05D004500 9.3e-231 804.7 1160 42.5
vmacro13051 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 9.3e-231 804.7 1150 42.7
Rhsim01G0023800 Rhododendron simsii HOM05D003560 ORTHO05D004500 7.9e-230 801.6 1153 42.6
Gohir.D05G008900 Gossypium hirsutum HOM05D003560 ORTHO05D004500 3.0e-229 799.7 1158 42.7
Gorai.009G009100 Gossypium raimondii HOM05D003560 ORTHO05D004500 5.1e-229 798.9 1158 42.6
Dinv42820 Davidia involucrata HOM05D003560 ORTHO05D004500 1.1e-228 797.7 1158 42.2
Dinv43280 Davidia involucrata HOM05D003560 ORTHO05D004500 1.1e-228 797.7 1158 42.2
Gohir.A05G008100 Gossypium hirsutum HOM05D003560 ORTHO05D004500 2.5e-228 796.6 1155 42.3
SalBow1G5562 Salvia bowleyana HOM05D003560 ORTHO05D004500 7.4e-228 795.0 1159 42.0
EL10Ac8g18909 Beta vulgaris HOM05D003560 ORTHO05D004500 1.3e-227 794.3 1154 43.0
Atru.chr7.14 Acer truncatum HOM05D003560 ORTHO05D004500 3.7e-227 792.7 1171 43.0
FAN12G4167 Fragaria x ananassa HOM05D003560 ORTHO05D004500 8.2e-227 791.6 1154 41.9
ATR0749G018 Amborella trichopoda HOM05D003560 ORTHO05D004500 1.1e-226 791.2 1161 42.8
RcHm_v2.0_Chr4g0405611 Rosa chinensis HOM05D003560 ORTHO05D004500 1.1e-226 791.2 1149 41.8
FAN22G1868 Fragaria x ananassa HOM05D003560 ORTHO05D004500 5.3e-226 788.9 1149 41.8
FvH4_4g10150 Fragaria vesca HOM05D003560 ORTHO05D004500 3.4e-225 786.2 1153 41.5
Nitab4.5_0006744g0010 Nicotiana tabacum HOM05D003560 ORTHO05D004500 3.4e-225 786.2 1161 41.7
Dinv41343 Davidia involucrata HOM05D003560 ORTHO05D004500 1.0e-224 784.6 1168 42.1
FAN12G2950 Fragaria x ananassa HOM05D003560 ORTHO05D004500 1.3e-224 784.3 1153 41.6
SGA_v2.0_scaffold265G46080 Striga asiatica HOM05D003560 ORTHO05D004500 4.9e-224 782.3 1195 41.0
FAN17G2275 Fragaria x ananassa HOM05D003560 ORTHO05D004500 6.5e-224 781.9 1149 41.7
Glyma.17G071400 Glycine max HOM05D003560 ORTHO05D004500 6.5e-224 781.9 1156 41.6
Cc06_g14510 Coffea canephora HOM05D003560 ORTHO05D004500 1.1e-223 781.2 1161 42.4
PGSC0003DMG400011153 Solanum tuberosum HOM05D003560 ORTHO05D004500 3.2e-223 779.6 1170 40.7
Thecc.09G153600 Theobroma cacao HOM05D003560 ORTHO05D004500 7.1e-223 778.5 1171 41.7
MD04G1049500 Malus domestica HOM05D003560 ORTHO05D004500 2.1e-222 776.9 1146 41.5
Haze_19142 Corylus avellana HOM05D003560 ORTHO05D004500 2.7e-222 776.5 1160 41.9
Eucgr.C00241 Eucalyptus grandis HOM05D003560 ORTHO05D004500 3.5e-222 776.2 1173 42.0
Nitab4.5_0001036g0120 Nicotiana tabacum HOM05D003560 ORTHO05D004500 7.9e-222 775.0 1157 41.3
Peaxi162Scf00563g00417 Petunia axillaris HOM05D003560 ORTHO05D004500 1.3e-221 774.2 1163 41.3
Prupe.1G102400 Prunus persica HOM05D003560 ORTHO05D004500 6.7e-221 771.9 1154 41.5
MSTRG.19664 Avicennia marina HOM05D003560 ORTHO05D004500 8.7e-221 771.5 1163 40.5
Ah.09g228690 Amaranthus hybridus HOM05D003560 ORTHO05D004500 1.1e-220 771.2 1148 42.0
Sopen07g002100 Solanum pennellii HOM05D003560 ORTHO05D004500 1.1e-220 771.2 1163 41.0
Glyma.02G206500 Glycine max HOM05D003560 ORTHO05D004500 2.5e-220 770.0 1154 41.2
HanXRQChr10g0307611 Helianthus annuus HOM05D003560 ORTHO05D004500 2.5e-220 770.0 1139 41.1
FAN07G0247 Fragaria x ananassa HOM05D003560 ORTHO05D004500 4.3e-220 769.2 1169 40.7
arahy.Tifrunner.gnm1.ann1.752C0V Arachis hypogaea HOM05D003560 ORTHO05D004500 5.7e-220 768.8 1156 41.3
Ciclev10007284m.g Citrus clementina HOM05D003560 ORTHO05D004500 1.3e-219 767.7 1166 40.9
Solyc07g005970.3 Solanum lycopersicum HOM05D003560 ORTHO05D004500 1.3e-219 767.7 1180 40.8
Sed0017470 Sechium edule HOM05D003560 ORTHO05D004500 1.6e-219 767.3 1157 40.7
DCAR_009892 Daucus carota HOM05D003560 ORTHO05D004500 2.2e-219 766.9 1151 41.1
CAN.G1190.4 Capsicum annuum HOM05D003560 ORTHO05D004500 8.2e-219 765.0 1164 41.1
CiPaw.16G106900 Carya illinoinensis HOM05D003560 ORTHO05D004500 1.1e-218 764.6 1161 40.8
ECA234G2881 Erigeron canadensis HOM05D003560 ORTHO05D004500 1.1e-218 764.6 1136 41.2
Potri.018G103000 Populus trichocarpa HOM05D003560 ORTHO05D004500 1.1e-218 764.6 1169 42.3
GSVIVG01023682001 Vitis vinifera HOM05D003560 ORTHO05D004500 6.9e-218 761.9 1156 41.0
Duzib168G0378 Durio zibethinus HOM05D003560 ORTHO05D004500 1.2e-217 761.1 1172 40.7
HanXRQChr12g0357781 Helianthus annuus HOM05D003560 ORTHO05D004500 2.0e-217 760.4 1138 40.6
Lj4g0007617 Lotus japonicus HOM05D003560 ORTHO05D004500 2.0e-217 760.4 1153 41.2
Cfa020786 Carpinus fangiana HOM05D003560 ORTHO05D004500 3.4e-217 759.6 1167 41.3
CANSAT11G0384 Cannabis sativa HOM05D003560 ORTHO05D004500 7.6e-217 758.4 1152 41.3
ClCG02G014310 Citrullus lanatus HOM05D003560 ORTHO05D004500 1.3e-216 757.7 1160 40.4
CDE02G1528 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 6.5e-216 755.4 1154 41.5
Phvul.003G153800 Phaseolus vulgaris HOM05D003560 ORTHO05D004500 3.6e-214 749.6 1159 40.6
Potri.006G180800 Populus trichocarpa HOM05D003560 ORTHO05D004500 3.6e-214 749.6 1167 41.8
Sabra06G0137800 Salix brachista HOM05D003560 ORTHO05D004500 3.6e-214 749.6 1180 41.4
TPR.G24844 Trifolium pratense HOM05D003560 ORTHO05D004500 4.6e-214 749.2 1156 40.0
CARHR238630 Cardamine hirsuta HOM05D003560 ORTHO05D004500 6.1e-214 748.8 1166 40.6
Lalb_Chr12g0198821 Lupinus albus HOM05D003560 ORTHO05D004500 6.1e-214 748.8 1153 40.9
MD13G1257100 Malus domestica HOM05D003560 ORTHO05D004500 1.3e-213 747.7 1157 39.8
BcaNung04829 Brassica carinata HOM05D003560 ORTHO05D004500 1.8e-213 747.3 1169 40.3
Thhalv10024256m.g Eutrema salsugineum HOM05D003560 ORTHO05D004500 3.0e-213 746.5 1162 40.4
Ca_21152_v3 Cicer arietinum L. HOM05D003560 ORTHO05D004500 6.7e-213 745.3 1152 39.8
Lsat_1_v5_gn_5_89080 Lactuca sativa HOM05D003560 ORTHO05D004500 6.7e-213 745.3 1157 41.1
Lalb_Chr13g0300691 Lupinus albus HOM05D003560 ORTHO05D004500 1.5e-212 744.2 1161 41.0
SalBow1G1777 Salvia bowleyana HOM05D003560 ORTHO05D004500 1.5e-212 744.2 1156 40.8
unitig_37.g12751 Utricularia gibba HOM05D003560 ORTHO05D004500 1.5e-212 744.2 1158 39.4
Carub.0007s0981 Capsella rubella HOM05D003560 ORTHO05D004500 1.9e-212 743.8 1168 40.5
MELO3C004116.2 Cucumis melo HOM05D003560 ORTHO05D004500 1.9e-212 743.8 1161 39.7
VMungo1215G0464 Vigna mungo HOM05D003560 ORTHO05D004500 3.3e-212 743.0 1152 40.5
A01p07380 Brassica napus HOM05D003560 ORTHO05D004500 4.3e-212 742.7 1161 40.0
Duzib150G1559 Durio zibethinus HOM05D003560 ORTHO05D004500 2.2e-211 740.3 1168 40.9
BraA01t00687Z Brassica rapa HOM05D003560 ORTHO05D004500 2.8e-211 740.0 1161 39.9
BcaC09g51868 Brassica carinata HOM05D003560 ORTHO05D004500 1.1e-210 738.0 1161 39.9
BolC1t00801H Brassica oleracea HOM05D003560 ORTHO05D004500 1.8e-210 737.3 1161 39.9
Hma1.2p1_1084F.1_g255280 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.5e-209 734.2 1150 41.9
Sed0019076 Sechium edule HOM05D003560 ORTHO05D004500 2.0e-209 733.8 1165 39.1
C01p08140 Brassica napus HOM05D003560 ORTHO05D004500 2.6e-209 733.4 1161 39.8
Medtr4g130370 Medicago truncatula HOM05D003560 ORTHO05D004500 5.9e-209 732.3 1152 39.3
BcaNung01560 Brassica carinata HOM05D003560 ORTHO05D004500 7.7e-209 731.9 1169 40.5
BraA03t15073Z Brassica rapa HOM05D003560 ORTHO05D004500 1.0e-208 731.5 1171 40.1
Aa31LG2G19610 Aethionema arabicum HOM05D003560 ORTHO05D004500 1.3e-208 731.1 1170 39.7
A03p60310 Brassica napus HOM05D003560 ORTHO05D004500 2.9e-208 729.9 1169 39.8
AUR62025371 Chenopodium quinoa HOM05D003560 ORTHO05D004500 3.8e-208 729.6 1145 40.1
QL02p094176 Quercus lobata HOM05D003560 ORTHO05D004500 3.8e-208 729.6 1162 40.0
A08p19080 Brassica napus HOM05D003560 ORTHO05D004500 6.5e-208 728.8 1161 40.1
Lsat_1_v5_gn_8_64740 Lactuca sativa HOM05D003560 ORTHO05D004500 6.5e-208 728.8 1141 40.1
CiPaw.15G164500 Carya illinoinensis HOM05D003560 ORTHO05D004500 8.5e-208 728.4 1164 40.1
Psat7g006640 Pisum sativum HOM05D003560 ORTHO05D004500 4.2e-207 726.1 1154 39.3
AT4G30790 Arabidopsis thaliana HOM05D003560 ORTHO05D004500 7.2e-207 725.3 1174 39.6
Sp7g28660 Schrenkiella parvula HOM05D003560 ORTHO05D004500 3.6e-206 723.0 1165 39.2
Lj9A721G57 Lonicera japonica HOM05D003560 ORTHO05D004500 6.1e-206 722.2 1158 40.2
THA.LOC104803909 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 6.1e-206 722.2 1188 39.4
BcaC01g01140 Brassica carinata HOM05D003560 ORTHO05D004500 1.4e-205 721.1 1161 40.1
C03p88520 Brassica napus HOM05D003560 ORTHO05D004500 1.4e-205 721.1 1161 40.1
BolC3t21162H Brassica oleracea HOM05D003560 ORTHO05D004500 1.4e-205 721.1 1161 40.1
THA.LOC104815517 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 1.8e-205 720.7 1171 39.3
Duzib187G1514 Durio zibethinus HOM05D003560 ORTHO05D004500 2.3e-205 720.3 1174 40.5
BraA08t33870Z Brassica rapa HOM05D003560 ORTHO05D004500 8.8e-205 718.4 1193 39.3
BolC7t46280H Brassica oleracea HOM05D003560 ORTHO05D004500 2.0e-204 717.2 1145 39.7
Rhsim03G0259200 Rhododendron simsii HOM05D003560 ORTHO05D004500 2.0e-204 717.2 1146 40.1
BcaNung02741 Brassica carinata HOM05D003560 ORTHO05D004500 3.7e-203 713.0 1143 39.1
PGR114G0002 Punica granatum HOM05D003560 ORTHO05D004500 1.1e-202 711.4 1157 39.6
PGR142G1236 Punica granatum HOM05D003560 ORTHO05D004500 1.1e-202 711.4 1157 39.6
C07p58220 Brassica napus HOM05D003560 ORTHO05D004500 2.4e-202 710.3 1144 39.2
Sc14g0000980 Simmondsia chinensis HOM05D003560 ORTHO05D004500 6.9e-202 708.8 1037 42.4
CSS0046771 Camellia sinensis var. sinensis HOM05D003560 ORTHO05D004500 1.2e-201 708.0 1145 40.5
THA.LOC104803549 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 1.2e-201 708.0 1170 39.3
ECA236G1776 Erigeron canadensis HOM05D003560 ORTHO05D004500 1.5e-201 707.6 1150 40.0
SGA_v2.0_scaffold45G17008 Striga asiatica HOM05D003560 ORTHO05D004500 1.5e-201 707.6 1150 39.3
Os02g0179800 Oryza sativa ssp. japonica HOM05D003560 ORTHO05D004500 1.7e-200 704.1 1160 39.7
PGR102G2861 Punica granatum HOM05D003560 ORTHO05D004500 3.8e-200 703.0 1168 39.1
TWI32G0440 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 5.0e-200 702.6 1162 38.8
Cpa.g.sc199.20 Carica papaya HOM05D003560 ORTHO05D004500 1.1e-199 701.4 1086 41.1
HanXRQChr05g0141571 Helianthus annuus HOM05D003560 ORTHO05D004500 2.7e-198 696.8 1151 38.9
Nn8g40053 Nelumbo nucifera HOM05D003560 ORTHO05D004500 2.2e-195 687.2 963 42.8
TWI34G0709 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 1.2e-193 681.4 1157 38.5
Zm00001eb206680 Zea mays HOM05D003560 ORTHO05D004500 5.9e-193 679.1 1147 38.9
Ah.14g084380 Amaranthus hybridus HOM05D003560 ORTHO05D004500 1.7e-192 677.6 1146 38.0
SMO361G0185 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 1.0e-189 668.3 1145 39.9
SMO361G0456 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 1.0e-189 668.3 1145 39.8
DCAR_020090 Daucus carota HOM05D003560 ORTHO05D004500 5.2e-189 666.0 1149 38.4
Zm00001eb233940 Zea mays HOM05D003560 ORTHO05D004500 9.7e-188 661.8 1160 37.7
CsaV3_2G007690 Cucumis sativus L. HOM05D003560 ORTHO05D004500 4.2e-183 646.4 1018 40.5
vmacro06053 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 4.2e-183 646.4 1142 37.4
Sabra18G0088600 Salix brachista HOM05D003560 ORTHO05D004500 6.8e-181 639.0 1175 38.4
AL7G21340 Arabidopsis lyrata HOM05D003560 ORTHO05D004500 9.8e-180 635.2 1160 37.0
Oeu024893.2 Olea europaea HOM05D003560 ORTHO05D004500 4.5e-169 599.7 1140 35.4
HPP92_021904 Vanilla planifolia HOM05D003560 ORTHO05D004500 2.1e-158 564.3 1198 34.4
MBI14_g31376_MAGBIO Magnolia biondii HOM05D003560 ORTHO05D004500 4.1e-154 550.1 745 43.9
Actinidia20936 Actinidia chinensis HOM05D003560 ORTHO05D004500 1.6e-153 548.1 863 41.6
arahy.Tifrunner.gnm1.ann1.IP23DV Arachis hypogaea HOM05D003560 ORTHO05D004500 3.0e-152 543.9 790 41.5
COL.COLO4_05033 Corchorus olitorius HOM05D003560 ORTHO05D004500 6.6e-152 542.7 890 40.9
CBR_g38482 Chara braunii HOM05D003560 ORTHO05D004500 8.1e-150 535.8 1331 33.6
MBI14_g08698_MAGBIO Magnolia biondii HOM05D003560 ORTHO05D004500 6.0e-145 519.6 833 40.5
CBR_g55388 Chara braunii HOM05D003560 ORTHO05D004500 7.3e-135 486.1 1382 31.1
Hma1.2p1_0222F.1_g093876 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.4e-109 402.1 819 35.4
Hma1.2p1_0222F.1_g093910 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.4e-109 402.1 819 35.4
CDE05G3326 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 8.4e-107 392.9 795 37.5
Actinidia24369 Actinidia chinensis HOM05D003560 ORTHO05D004500 2.2e-83 315.1 367 43.3
MCO10G226 Micromonas commoda HOM05D003560 ORTHO05D004500 1.6e-68 265.8 612 30.9
Cre16.g651350 Chlamydomonas reinhardtii HOM05D003560 ORTHO05D004500 5.0e-67 260.8 578 30.8
Manes.14G113300 Manihot esculenta HOM05D003560 ORTHO05D004500 2.6e-63 248.4 306 41.5
COL.COLO4_05032 Corchorus olitorius HOM05D003560 ORTHO05D004500 1.7e-62 245.7 304 41.4
PRCOL_00000855 Prasinoderma coloniale HOM05D003560 ORTHO05D004500 1.4e-61 242.7 544 29.8
vmacro06070 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 5.4e-37 161.0 226 41.6
Migut.K00302 Erythranthe guttata HOM05D003560 ORTHO05D004500 1.6e-33 149.4 848 21.9
Hma1.2p1_0222F.1_g093900 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 2.3e-32 145.6 258 39.9
Zm00001eb234440 Zea mays HOM05D003560 ORTHO05D004500 6.8e-24 117.5 131 51.9
GSVIVG01023678001 Vitis vinifera HOM05D003560 ORTHO05D004500 8.4e-22 110.5 111 51.4
Zm00001eb257740 Zea mays HOM05D003560 ORTHO05D004500 7.8e-20 104.0 121 51.2
Zm00001eb110220 Zea mays HOM05D003560 ORTHO05D004500 1.0e-19 103.6 135 49.6
Zm00001eb400070 Zea mays HOM05D003560 ORTHO05D004500 8.7e-19 100.5 103 53.4
TPR.G131 Trifolium pratense HOM05D003560 ORTHO05D004500 3.4e-15 88.6 150 40.0
RcHm_v2.0_Chr5g0033091 Rosa chinensis HOM05D003560 ORTHO05D004500 1.7e-14 86.3 72 58.3
BcaC01g01128 Brassica carinata HOM05D003560 ORTHO05D004500 7.1e-13 80.9 118 39.0
VMungo1127G1083 Vigna mungo HOM05D003560 ORTHO05D021703 5.1e-11 74.7 116 46.6
C03p39530 Brassica napus HOM05D003560 ORTHO05D021703 8.7e-11 73.9 113 40.7
C03p39520 Brassica napus HOM05D003560 ORTHO05D021703 7.3e-10 70.9 117 41.0
C04p25460 Brassica napus HOM05D003560 ORTHO05D021703 1.3e-09 70.1 116 38.8
BolC4t24064H Brassica oleracea HOM05D003560 ORTHO05D021703 1.3e-09 70.1 116 38.8
BcaC01g00594 Brassica carinata HOM05D003560 ORTHO05D021703 1.4e-08 66.6 113 39.8
Nn2g14361 Nelumbo nucifera HOM05D003560 ORTHO05D004500 4.0e-08 65.1 69 56.5
BcaC02g10746 Brassica carinata HOM05D003560 ORTHO05D027224 5.8e-07 61.2 366 26.2
SEGI_20080 Sequoiadendron giganteum HOM05D003560 ORTHO05D004500 9.9e-07 60.5 175 25.1


User provided reference genes

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