Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0041s0075 Marchantia polymorpha HOM05D006062 ORTHO05D007613 2.9e-143 511.9 263 100.0
MELO3C005432.2 Cucumis melo HOM05D006062 ORTHO05D007613 2.4e-89 332.8 258 68.6
Potri.019G042600 Populus trichocarpa HOM05D006062 ORTHO05D007613 2.4e-89 332.8 277 63.5
Glyma.11G012700 Glycine max HOM05D006062 ORTHO05D007613 1.2e-88 330.5 200 79.0
Gohir.D03G049700 Gossypium hirsutum HOM05D006062 ORTHO05D007613 1.2e-88 330.5 276 63.0
Gohir.A02G139100 Gossypium hirsutum HOM05D006062 ORTHO05D007613 1.6e-88 330.1 276 63.8
VMungo0720G1055 Vigna mungo HOM05D006062 ORTHO05D007613 2.0e-88 329.7 201 80.1
Phvul.002G037500 Phaseolus vulgaris HOM05D006062 ORTHO05D007613 2.6e-88 329.3 264 64.4
Glyma.01G229800 Glycine max HOM05D006062 ORTHO05D007613 3.5e-88 328.9 200 79.0
CsaV3_5G005280 Cucumis sativus L. HOM05D006062 ORTHO05D007613 7.7e-88 327.8 201 79.6
LjContig00222g0021869 Lotus japonicus HOM05D006062 ORTHO05D007613 1.0e-87 327.4 200 79.5
Sed0000932 Sechium edule HOM05D006062 ORTHO05D007613 1.3e-87 327.0 267 65.5
Manes.08G164800 Manihot esculenta HOM05D006062 ORTHO05D007613 2.2e-87 326.2 255 65.1
Lalb_Chr05g0211331 Lupinus albus HOM05D006062 ORTHO05D007613 2.9e-87 325.9 199 78.4
Duzib106G1742 Durio zibethinus HOM05D006062 ORTHO05D007613 3.8e-87 325.5 205 76.6
Eucgr.K00099 Eucalyptus grandis HOM05D006062 ORTHO05D007613 3.8e-87 325.5 274 63.1
Psat2g187840 Pisum sativum HOM05D006062 ORTHO05D007613 3.8e-87 325.5 265 64.5
Prupe.2G323500 Prunus persica HOM05D006062 ORTHO05D007613 3.8e-87 325.5 257 65.8
Duzib177G0391 Durio zibethinus HOM05D006062 ORTHO05D007613 5.0e-87 325.1 200 78.5
Gorai.003G051200 Gossypium raimondii HOM05D006062 ORTHO05D007613 5.0e-87 325.1 276 62.3
TWI60G0061 Tripterygium wilfordii HOM05D006062 ORTHO05D007613 6.5e-87 324.7 269 62.8
GSVIVG01024454001 Vitis vinifera HOM05D006062 ORTHO05D007613 8.5e-87 324.3 276 63.4
PGR142G0857 Punica granatum HOM05D006062 ORTHO05D007613 1.1e-86 323.9 200 78.0
Thecc.05G207500 Theobroma cacao HOM05D006062 ORTHO05D007613 1.5e-86 323.6 200 76.5
TPR.G37875 Trifolium pratense HOM05D006062 ORTHO05D007613 2.5e-86 322.8 258 65.5
Pp3c10_15730 Physcomitrium patens HOM05D006062 ORTHO05D007613 3.2e-86 322.4 200 78.0
Actinidia18696 Actinidia chinensis HOM05D006062 ORTHO05D007613 7.2e-86 321.2 199 76.9
CiPaw.06G020400 Carya illinoinensis HOM05D006062 ORTHO05D007613 7.2e-86 321.2 274 61.3
Hma1.2p1_0758F.1_g213560 Hydrangea macrophylla HOM05D006062 ORTHO05D007613 1.2e-85 320.5 199 75.9
Atru.chr12.2018 Acer truncatum HOM05D006062 ORTHO05D007613 2.1e-85 319.7 200 76.5
Medtr5g008050 Medicago truncatula HOM05D006062 ORTHO05D007613 8.0e-85 317.8 251 64.9
Cpa.g.sc39.53 Carica papaya HOM05D006062 ORTHO05D007613 1.0e-84 317.4 261 64.0
Aa31LG11G12480 Aethionema arabicum HOM05D006062 ORTHO05D007613 1.8e-84 316.6 267 63.7
ATR0829G005 Amborella trichopoda HOM05D006062 ORTHO05D007613 1.8e-84 316.6 280 59.3
BcaC03g18534 Brassica carinata HOM05D006062 ORTHO05D007613 1.8e-84 316.6 199 77.9
SMO140G0084 Selaginella moellendorffii HOM05D006062 ORTHO05D007613 1.8e-84 316.6 199 77.9
SEGI_19152 Sequoiadendron giganteum HOM05D006062 ORTHO05D007613 1.8e-84 316.6 200 76.0
Os08g0162600 Oryza sativa ssp. japonica HOM05D006062 ORTHO05D007613 2.3e-84 316.2 204 74.0
Cfa015906 Carpinus fangiana HOM05D006062 ORTHO05D007613 3.0e-84 315.8 272 62.1
Carub.0006s1536 Capsella rubella HOM05D006062 ORTHO05D007613 4.0e-84 315.5 268 63.8
Thhalv10014045m.g Eutrema salsugineum HOM05D006062 ORTHO05D007613 4.0e-84 315.5 267 63.3
AT5G17170 Arabidopsis thaliana HOM05D006062 ORTHO05D007613 6.7e-84 314.7 267 63.7
QL09p026245 Quercus lobata HOM05D006062 ORTHO05D007613 8.8e-84 314.3 278 60.1
RcHm_v2.0_Chr1g0383771 Rosa chinensis HOM05D006062 ORTHO05D007613 1.2e-83 313.9 249 65.5
AL6G28220 Arabidopsis lyrata HOM05D006062 ORTHO05D007613 1.5e-83 313.5 278 62.6
BcaNung00424 Brassica carinata HOM05D006062 ORTHO05D007613 2.0e-83 313.2 265 63.4
Sp6g27050 Schrenkiella parvula HOM05D006062 ORTHO05D007613 2.6e-83 312.8 235 66.8
HPP92_025526 Vanilla planifolia HOM05D006062 ORTHO05D007613 2.6e-83 312.8 200 74.5
BolC2t06792H Brassica oleracea HOM05D006062 ORTHO05D007613 7.5e-83 311.2 202 76.7
FvH4_7g33550 Fragaria vesca HOM05D006062 ORTHO05D007613 7.5e-83 311.2 250 64.8
MD07G1305400 Malus domestica HOM05D006062 ORTHO05D007613 7.5e-83 311.2 241 67.2
HPP92_025509 Vanilla planifolia HOM05D006062 ORTHO05D007613 7.5e-83 311.2 200 74.0
THA.LOC104820874 Tarenaya hassleriana HOM05D006062 ORTHO05D007613 9.7e-83 310.8 261 62.8
Sopen03g027600 Solanum pennellii HOM05D006062 ORTHO05D007613 1.3e-82 310.5 279 60.6
CANSAT21G2164 Cannabis sativa HOM05D006062 ORTHO05D007613 2.2e-82 309.7 209 73.7
Solyc03g096850.4 Solanum lycopersicum HOM05D006062 ORTHO05D007613 2.2e-82 309.7 279 60.6
SGA_v2.0_scaffold18G08502 Striga asiatica HOM05D006062 ORTHO05D007613 2.8e-82 309.3 281 58.4
C02p08780 Brassica napus HOM05D006062 ORTHO05D007613 3.7e-82 308.9 265 63.4
HanXRQChr04g0105241 Helianthus annuus HOM05D006062 ORTHO05D007613 3.7e-82 308.9 203 74.4
Aqoxy3G02060 Aquilegia oxysepala HOM05D006062 ORTHO05D007613 4.8e-82 308.5 273 60.8
PGSC0003DMG400000569 Solanum tuberosum HOM05D006062 ORTHO05D007613 4.8e-82 308.5 279 59.9
CARHR196050 Cardamine hirsuta HOM05D006062 ORTHO05D007613 8.2e-82 307.8 266 62.4
Ciclev10012505m.g Citrus clementina HOM05D006062 ORTHO05D007613 8.2e-82 307.8 200 75.0
DCAR_014570 Daucus carota HOM05D006062 ORTHO05D007613 8.2e-82 307.8 273 60.4
MSTRG.26938 Avicennia marina HOM05D006062 ORTHO05D007613 3.1e-81 305.8 274 60.9
Migut.F00106 Erythranthe guttata HOM05D006062 ORTHO05D007613 3.1e-81 305.8 274 59.1
CAN.G303.70 Capsicum annuum HOM05D006062 ORTHO05D007613 4.1e-81 305.4 277 58.8
Ca_24458_v3 Cicer arietinum L. HOM05D006062 ORTHO05D007613 5.3e-81 305.1 273 59.7
Ca_24464_v3 Cicer arietinum L. HOM05D006062 ORTHO05D007613 5.3e-81 305.1 273 59.7
PSO782G5695 Papaver somniferum HOM05D006062 ORTHO05D007613 9.1e-81 304.3 224 67.4
Hund02967 Selenicereus undatus HOM05D006062 ORTHO05D007613 9.1e-81 304.3 211 71.1
A02p03960 Brassica napus HOM05D006062 ORTHO05D007613 5.9e-80 301.6 200 75.0
BraA02t05361Z Brassica rapa HOM05D006062 ORTHO05D007613 7.7e-80 301.2 269 61.7
PSO063G5144 Papaver somniferum HOM05D006062 ORTHO05D007613 7.7e-80 301.2 260 61.2
CSS0001214 Camellia sinensis var. sinensis HOM05D006062 ORTHO05D007613 1.0e-79 300.8 290 59.0
ECA233G2527 Erigeron canadensis HOM05D006062 ORTHO05D007613 1.1e-78 297.4 271 60.5
Zm00001eb415470 Zea mays HOM05D006062 ORTHO05D007613 1.9e-78 296.6 204 71.6
BolC9t58838H Brassica oleracea HOM05D006062 ORTHO05D007613 7.2e-78 294.7 202 74.3
C09p60030 Brassica napus HOM05D006062 ORTHO05D007613 9.4e-78 294.3 187 76.5
Sabra19G0053200 Salix brachista HOM05D006062 ORTHO05D007613 4.7e-77 292.0 334 51.8
BcaC04g18827 Brassica carinata HOM05D006062 ORTHO05D007613 1.7e-71 273.5 281 56.9
ClCG01G005020 Citrullus lanatus HOM05D006062 ORTHO05D007613 1.7e-71 273.5 201 71.1
A10p22220 Brassica napus HOM05D006062 ORTHO05D007613 1.9e-70 270.0 180 74.4
BraA10t44281Z Brassica rapa HOM05D006062 ORTHO05D007613 1.9e-70 270.0 180 74.4
Actinidia28267 Actinidia chinensis HOM05D006062 ORTHO05D007613 4.2e-70 268.9 162 78.4
Rhsim09G0211900 Rhododendron simsii HOM05D006062 ORTHO05D007613 3.6e-69 265.8 278 55.4
MBI04_g27273_MAGBIO Magnolia biondii HOM05D006062 ORTHO05D007613 6.1e-69 265.0 260 56.2
AUR62005918 Chenopodium quinoa HOM05D006062 ORTHO05D007613 4.0e-68 262.3 271 54.6
Ah.13g071240 Amaranthus hybridus HOM05D006062 ORTHO05D007613 2.0e-67 260.0 271 55.4
Hma1.2p1_0758F.1_g213550 Hydrangea macrophylla HOM05D006062 ORTHO05D007613 2.6e-67 259.6 280 54.6
Cc02_g00440 Coffea canephora HOM05D006062 ORTHO05D007613 3.7e-66 255.8 201 65.7
EL10Ac3g05103 Beta vulgaris HOM05D006062 ORTHO05D007613 4.1e-65 252.3 293 51.5
CDE02G0767 Ceratophyllum demersum HOM05D006062 ORTHO05D007613 1.6e-64 250.4 194 64.9
SalBow4G0173 Salvia bowleyana HOM05D006062 ORTHO05D007613 1.6e-64 250.4 195 64.6
Sc25g0001120 Simmondsia chinensis HOM05D006062 ORTHO05D007613 4.5e-64 248.8 178 69.1
TAR375G0226 Trochodendron aralioides HOM05D006062 ORTHO05D007613 7.8e-64 248.1 197 65.5
CDE02G0118 Ceratophyllum demersum HOM05D006062 ORTHO05D007613 5.0e-63 245.4 213 61.0
arahy.Tifrunner.gnm1.ann1.GZNV26 Arachis hypogaea HOM05D006062 ORTHO05D007613 1.6e-61 240.4 264 54.5
Nn1g02035 Nelumbo nucifera HOM05D006062 ORTHO05D007613 2.1e-61 240.0 150 75.3
Peaxi162Scf01650g00050 Petunia axillaris HOM05D006062 ORTHO05D007613 2.8e-61 239.6 275 50.5
arahy.Tifrunner.gnm1.ann1.GUDI7G Arachis hypogaea HOM05D006062 ORTHO05D007613 2.3e-55 219.9 269 50.2
COL.COLO4_08912 Corchorus olitorius HOM05D006062 ORTHO05D007613 1.2e-53 214.2 185 62.7
Haze_00586 Corylus avellana HOM05D006062 ORTHO05D007613 4.0e-52 209.1 272 47.4
AUR62028145 Chenopodium quinoa HOM05D006062 ORTHO05D007613 3.4e-51 206.1 197 56.9
FAN01G1199 Fragaria x ananassa HOM05D006062 ORTHO05D007613 1.3e-50 204.1 171 64.9
FAN10G2030 Fragaria x ananassa HOM05D006062 ORTHO05D007613 2.9e-50 203.0 171 64.3
FAN10G3926 Fragaria x ananassa HOM05D006062 ORTHO05D007613 2.9e-50 203.0 171 64.3
MD01G1233200 Malus domestica HOM05D006062 ORTHO05D007613 1.6e-48 197.2 214 52.8
Lj3A890T59 Lonicera japonica HOM05D006062 ORTHO05D007613 4.6e-48 195.7 201 57.7
Lsat_1_v5_gn_8_3801 Lactuca sativa HOM05D006062 ORTHO05D007613 1.3e-47 194.1 273 45.1
Cre12.g510400 Chlamydomonas reinhardtii HOM05D006062 ORTHO05D007613 3.9e-47 192.6 208 49.5
unitig_52.g17697 Utricularia gibba HOM05D006062 ORTHO05D007613 8.1e-45 184.9 144 63.9
PRCOL_00001509 Prasinoderma coloniale HOM05D006062 ORTHO05D007613 1.3e-39 167.5 206 47.1
TAR375G0371 Trochodendron aralioides HOM05D006062 ORTHO05D007613 6.6e-39 165.2 129 64.3
AagrBONN_evm.TU.Sc2ySwM_117.4047 Anthoceros agrestis HOM05D006062 ORTHO05D007613 3.3e-38 162.9 144 57.6
Dinv29176 Davidia involucrata HOM05D006062 ORTHO05D007613 2.8e-37 159.8 164 55.5
Duzib187G0879 Durio zibethinus HOM05D006062 ORTHO05D007613 3.4e-35 152.9 93 74.2
Nitab4.5_0002302g0030 Nicotiana tabacum HOM05D006062 ORTHO05D007613 4.4e-35 152.5 248 39.9
CBR_g41688 Chara braunii HOM05D006062 ORTHO05D007613 2.3e-31 140.2 87 74.7
Cc11_g03890 Coffea canephora HOM05D006062 ORTHO05D007613 3.9e-31 139.4 117 63.2
Aqoxy1G04105 Aquilegia oxysepala HOM05D006062 ORTHO05D007613 3.5e-24 116.3 108 56.5
FAN03G0703 Fragaria x ananassa HOM05D006062 ORTHO05D007613 2.3e-23 113.6 81 64.2
Oeu033092.1 Olea europaea HOM05D006062 ORTHO05D007613 5.6e-22 109.0 56 89.3
unitig_52.g17696 Utricularia gibba HOM05D006062 ORTHO05D007613 1.1e-20 104.8 79 63.3
CBR_g41690 Chara braunii HOM05D006062 ORTHO05D008129 1.4e-20 104.4 93 54.8
CDE02G3588 Ceratophyllum demersum HOM05D006062 ORTHO05D007613 1.6e-13 80.9 82 51.2
Nitab4.5_0000021g0330 Nicotiana tabacum HOM05D006062 ORTHO05D007613 1.1e-12 78.2 62 62.9
COL.COLO4_08913 Corchorus olitorius HOM05D006062 ORTHO05D007613 2.6e-11 73.6 58 62.1
MCO07G731 Micromonas commoda HOM05D000104 ORTHO05D006071 2.9e-10 70.1 51 54.9
BraA02t05363Z Brassica rapa HOM05D001822 ORTHO05D001744 3.8e-10 69.7 54 57.4
A02p04000 Brassica napus HOM05D001822 ORTHO05D001744 4.9e-10 69.3 53 58.5
Lj3A890T58 Lonicera japonica HOM05D006062 ORTHO05D007613 4.9e-10 69.3 57 57.9
Lalb_Chr12g0204581 Lupinus albus HOM05D005410 ORTHO05D007394 6.7e-07 58.9 71 39.4
Potri.015G108100 Populus trichocarpa HOM05D006645 ORTHO05D008129 6.7e-07 58.9 112 35.7
CDE05G3351 Ceratophyllum demersum HOM05D006645 ORTHO05D008129 8.7e-07 58.5 146 30.1
CBR_g66797 Chara braunii HOM05D005410 ORTHO05D007394 1.1e-06 58.2 71 39.4
DCAR_016335 Daucus carota HOM05D006645 ORTHO05D008129 1.1e-06 58.2 110 34.5
Pp3c19_15590 Physcomitrium patens HOM05D005410 ORTHO05D007394 1.5e-06 57.8 141 29.1
Glyma.08G124900 Glycine max HOM05D005410 ORTHO05D007394 2.5e-06 57.0 71 36.6
Glyma.05G166800 Glycine max HOM05D005410 ORTHO05D007394 3.3e-06 56.6 71 36.6
MD03G1003100 Malus domestica HOM05D005410 ORTHO05D007394 3.3e-06 56.6 75 38.7
Medtr8g088420 Medicago truncatula HOM05D005410 ORTHO05D007394 3.3e-06 56.6 71 38.0
Sabra15G0128400 Salix brachista HOM05D006645 ORTHO05D008129 3.3e-06 56.6 108 36.1
Sabra15G0130800 Salix brachista HOM05D006645 ORTHO05D008129 3.3e-06 56.6 108 36.1
TPR.G6787 Trifolium pratense HOM05D005410 ORTHO05D007394 3.3e-06 56.6 111 32.4
VMungo0251G1592 Vigna mungo HOM05D005410 ORTHO05D007394 3.3e-06 56.6 70 38.6
AL1G63500 Arabidopsis lyrata HOM05D005410 ORTHO05D007394 4.3e-06 56.2 141 30.5
EL10Ac5g11273 Beta vulgaris HOM05D006645 ORTHO05D008129 4.3e-06 56.2 91 35.2
Sed0010334 Sechium edule HOM05D006645 ORTHO05D008129 4.3e-06 56.2 56 44.6
TAR369G0462 Trochodendron aralioides HOM05D005410 ORTHO05D007394 4.3e-06 56.2 70 40.0
AUR62005847 Chenopodium quinoa HOM05D005410 ORTHO05D007394 5.6e-06 55.8 81 33.3
AUR62043377 Chenopodium quinoa HOM05D006645 ORTHO05D008129 5.6e-06 55.8 89 36.0
COL.COLO4_37268 Corchorus olitorius HOM05D006645 ORTHO05D008129 5.6e-06 55.8 149 26.8
Gohir.A04G090700 Gossypium hirsutum HOM05D005410 ORTHO05D007394 5.6e-06 55.8 71 38.0
Gohir.D04G130700 Gossypium hirsutum HOM05D005410 ORTHO05D007394 5.6e-06 55.8 71 38.0
Gorai.012G114400 Gossypium raimondii HOM05D005410 ORTHO05D007394 5.6e-06 55.8 71 38.0
Phvul.002G247200 Phaseolus vulgaris HOM05D005410 ORTHO05D007394 5.6e-06 55.8 71 35.2
Sp6g13160 Schrenkiella parvula HOM05D006645 ORTHO05D008129 5.6e-06 55.8 106 35.8
HanXRQChr07g0186621 Helianthus annuus HOM05D005410 ORTHO05D007394 7.4e-06 55.5 81 32.1
Lj4g0005740 Lotus japonicus HOM05D005410 ORTHO05D007394 7.4e-06 55.5 111 33.3
Peaxi162Scf00314g00728 Petunia axillaris HOM05D006645 ORTHO05D008129 7.4e-06 55.5 104 34.6
Psat7g064320 Pisum sativum HOM05D005410 ORTHO05D007394 7.4e-06 55.5 71 38.0
ATR0697G079 Amborella trichopoda HOM05D005410 ORTHO05D007394 9.6e-06 55.1 87 31.0
CARHR045150 Cardamine hirsuta HOM05D005410 ORTHO05D007394 9.6e-06 55.1 138 31.2
Ca_10875_v3 Cicer arietinum L. HOM05D006645 ORTHO05D008129 9.6e-06 55.1 108 34.3
Thhalv10011629m.g Eutrema salsugineum HOM05D005410 ORTHO05D007394 9.6e-06 55.1 73 37.0
vmacro19114 Vaccinium macrocarpon HOM05D006645 ORTHO05D008129 9.6e-06 55.1 115 31.3
vmacro19194 Vaccinium macrocarpon HOM05D006645 ORTHO05D008129 9.6e-06 55.1 115 31.3


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