Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0041s0069 Marchantia polymorpha HOM05D016829 ORTHO05D017313 0.0e+00 1361.3 679 100.0
Mapoly0060s0086 Marchantia polymorpha HOM05D016829 ORTHO05D017313 1.5e-111 407.9 641 39.3
Pp3c27_4280 Physcomitrium patens HOM05D016829 ORTHO05D017313 8.3e-102 375.6 631 38.0
AagrBONN_evm.TU.Sc2ySwM_344.5540 Anthoceros agrestis HOM05D016829 ORTHO05D017313 4.3e-66 256.9 639 31.1
Pp3c18_19460 Physcomitrium patens HOM05D016829 ORTHO05D017313 7.4e-58 229.6 332 41.6
Cfa024588 Carpinus fangiana HOM05D016829 ORTHO05D017313 2.5e-21 108.2 200 34.0
AagrBONN_evm.TU.Sc2ySwM_117.2233 Anthoceros agrestis HOM05D020779 ORTHO05D023529 1.1e-08 66.2 224 27.2
Pp3c16_20390 Physcomitrium patens HOM05D049827 ORTHO05D017313 1.1e-08 66.2 85 37.6
Pp3c16_20400 Physcomitrium patens HOM05D049827 ORTHO05D017313 1.1e-08 66.2 85 37.6
Sp3g31730 Schrenkiella parvula HOM05D001992 ORTHO05D002199 1.4e-08 65.9 226 28.3
SpUn0030_0100 Schrenkiella parvula HOM05D001992 ORTHO05D002199 1.4e-08 65.9 226 28.3
Solyc02g062700.3 Solanum lycopersicum HOM05D001992 ORTHO05D002199 2.4e-08 65.1 210 29.0
Sopen02g013720 Solanum pennellii HOM05D001992 ORTHO05D002199 2.4e-08 65.1 210 29.0
BcaB07g31674 Brassica carinata HOM05D001992 ORTHO05D002199 3.1e-08 64.7 198 29.8
Os02g0706500 Oryza sativa ssp. japonica HOM05D001992 ORTHO05D002199 4.1e-08 64.3 252 26.6
Aqoxy7G03279 Aquilegia oxysepala HOM05D001992 ORTHO05D002199 5.4e-08 63.9 210 28.6
Thhalv10022590m.g Eutrema salsugineum HOM05D001992 ORTHO05D002199 5.4e-08 63.9 244 27.5
Cre16.g676350 Chlamydomonas reinhardtii HOM05D000070 ORTHO05D023529 7.0e-08 63.5 189 29.1
Lsat_1_v5_gn_4_151281 Lactuca sativa HOM05D001992 ORTHO05D002199 7.0e-08 63.5 221 28.1
MD07G1308800 Malus domestica HOM05D001992 ORTHO05D002199 7.0e-08 63.5 186 28.0
BcaC04g22914 Brassica carinata HOM05D001992 ORTHO05D002199 9.1e-08 63.2 198 29.8
A09p11830 Brassica napus HOM05D001992 ORTHO05D002199 9.1e-08 63.2 198 29.8
C09p13930 Brassica napus HOM05D001992 ORTHO05D002199 9.1e-08 63.2 198 29.8
BraA09t36829Z Brassica rapa HOM05D001992 ORTHO05D002199 9.1e-08 63.2 198 29.8
Nitab4.5_0000136g0360 Nicotiana tabacum HOM05D001992 ORTHO05D002199 9.1e-08 63.2 210 28.6
SMO169G0088 Selaginella moellendorffii HOM05D000147 ORTHO05D007841 9.1e-08 63.2 192 28.1
Atru.chr12.1965 Acer truncatum HOM05D001992 ORTHO05D002199 1.2e-07 62.8 197 26.9
Dinv17256 Davidia involucrata HOM05D001992 ORTHO05D002199 1.2e-07 62.8 222 27.5
Pp3c18_19470 Physcomitrium patens HOM05D016829 ORTHO05D017313 1.2e-07 62.8 121 28.1
Sp7g34220 Schrenkiella parvula HOM05D001992 ORTHO05D002199 1.2e-07 62.8 199 28.6
SGA_v2.0_scaffold59G20766 Striga asiatica HOM05D001992 ORTHO05D002199 1.2e-07 62.8 201 27.9
PGSC0003DMG400015506 Solanum tuberosum HOM05D001992 ORTHO05D002199 1.6e-07 62.4 210 28.6
TWI09G0124 Tripterygium wilfordii HOM05D001992 ORTHO05D002199 1.6e-07 62.4 210 29.0
Duzib147G1129 Durio zibethinus HOM05D001992 ORTHO05D002199 2.0e-07 62.0 208 29.8
HanXRQChr05g0139021 Helianthus annuus HOM05D001992 ORTHO05D002199 2.0e-07 62.0 204 27.5
Nitab4.5_0010396g0010 Nicotiana tabacum HOM05D001992 ORTHO05D002199 2.0e-07 62.0 210 28.1
GSVIVG01024407001 Vitis vinifera HOM05D001992 ORTHO05D002199 2.0e-07 62.0 186 28.5
BolC9t58849H Brassica oleracea HOM05D001992 ORTHO05D002199 2.7e-07 61.6 195 27.2
CARHR108920 Cardamine hirsuta HOM05D001992 ORTHO05D002199 2.7e-07 61.6 198 29.8
FvH4_7g33981 Fragaria vesca HOM05D001992 ORTHO05D002199 2.7e-07 61.6 186 28.5
Hma1.2p1_1680F.1_g297190 Hydrangea macrophylla HOM05D001992 ORTHO05D002199 2.7e-07 61.6 198 27.3
Oeu033654.1 Olea europaea HOM05D001992 ORTHO05D002199 2.7e-07 61.6 208 27.9
RcHm_v2.0_Chr1g0384221 Rosa chinensis HOM05D001992 ORTHO05D002199 2.7e-07 61.6 186 28.5
Actinidia08744 Actinidia chinensis HOM05D001992 ORTHO05D002199 3.5e-07 61.2 188 28.2
Mapoly0023s0143 Marchantia polymorpha HOM05D020779 ORTHO05D023529 3.5e-07 61.2 197 26.4
Potri.001G458200 Populus trichocarpa HOM05D001992 ORTHO05D002199 3.5e-07 61.2 186 28.0
Prupe.2G326200 Prunus persica HOM05D001992 ORTHO05D002199 3.5e-07 61.2 187 26.7
Sabra16G0310600 Salix brachista HOM05D001992 ORTHO05D002199 3.5e-07 61.2 186 28.0
THA.LOC104807453 Tarenaya hassleriana HOM05D001992 ORTHO05D002199 3.5e-07 61.2 218 27.1
Aa31LG6G13380 Aethionema arabicum HOM05D001992 ORTHO05D002199 4.5e-07 60.8 220 27.7
BcaNung00720 Brassica carinata HOM05D001992 ORTHO05D002199 4.5e-07 60.8 218 27.1
C03p59170 Brassica napus HOM05D001992 ORTHO05D002199 4.5e-07 60.8 198 28.8
BolC3t18175H Brassica oleracea HOM05D001992 ORTHO05D002199 4.5e-07 60.8 198 28.8
CANSAT01G1977 Cannabis sativa HOM05D001992 ORTHO05D002199 4.5e-07 60.8 211 28.4
MD01G1236100 Malus domestica HOM05D001992 ORTHO05D002199 4.5e-07 60.8 186 27.4
Medtr6g005760 Medicago truncatula HOM05D001992 ORTHO05D002199 4.5e-07 60.8 217 26.7
AL7G14490 Arabidopsis lyrata HOM05D001992 ORTHO05D002199 5.9e-07 60.5 216 27.8
Cpa.g.sc6.123 Carica papaya HOM05D001992 ORTHO05D002199 5.9e-07 60.5 204 27.9
MELO3C024728.2 Cucumis melo HOM05D001992 ORTHO05D002199 5.9e-07 60.5 210 27.1
Lj1C1033G19 Lonicera japonica HOM05D001992 ORTHO05D002199 5.9e-07 60.5 186 28.5
Sabra07G0020800 Salix brachista HOM05D001992 ORTHO05D002199 5.9e-07 60.5 250 24.8
SEGI_20347 Sequoiadendron giganteum HOM05D020779 ORTHO05D023529 5.9e-07 60.5 213 25.8
SGA_v2.0_scaffold50G18441 Striga asiatica HOM05D001992 ORTHO05D002199 5.9e-07 60.5 201 27.4
CSS0032508 Camellia sinensis var. sinensis HOM05D001992 ORTHO05D002199 7.7e-07 60.1 200 27.0
CANSAT21G0564 Cannabis sativa HOM05D001992 ORTHO05D002199 7.7e-07 60.1 198 26.3
PSO170G2395 Papaver somniferum HOM05D001992 ORTHO05D002199 7.7e-07 60.1 205 29.3
Peaxi162Scf00008g03517 Petunia axillaris HOM05D001992 ORTHO05D002199 7.7e-07 60.1 184 28.8
Actinidia18706 Actinidia chinensis HOM05D001992 ORTHO05D002199 1.0e-06 59.7 188 27.7
Aa31LG8G15700 Aethionema arabicum HOM05D001992 ORTHO05D002199 1.0e-06 59.7 212 27.4
arahy.Tifrunner.gnm1.ann1.36GKGQ Arachis hypogaea HOM05D001992 ORTHO05D002199 1.0e-06 59.7 191 27.7
arahy.Tifrunner.gnm1.ann1.ZLW3JE Arachis hypogaea HOM05D001992 ORTHO05D002199 1.0e-06 59.7 191 27.7
A05p44120 Brassica napus HOM05D001992 ORTHO05D002199 1.0e-06 59.7 179 27.4
BNapus_Darmor_BZH_scaffold_129p00050 Brassica napus HOM05D001992 ORTHO05D002199 1.0e-06 59.7 188 26.6
C05p63750 Brassica napus HOM05D001992 ORTHO05D002199 1.0e-06 59.7 179 27.4
BolC1t05851H Brassica oleracea HOM05D001992 ORTHO05D002199 1.0e-06 59.7 188 26.6
BolC5t35044H Brassica oleracea HOM05D001992 ORTHO05D002199 1.0e-06 59.7 179 27.4
BraSC90t46699Z Brassica rapa HOM05D001992 ORTHO05D002199 1.0e-06 59.7 179 27.4
DCAR_020408 Daucus carota HOM05D001992 ORTHO05D002199 1.0e-06 59.7 204 26.0
Thhalv10024668m.g Eutrema salsugineum HOM05D001992 ORTHO05D002199 1.0e-06 59.7 200 27.0
Os02g0697600 Oryza sativa ssp. japonica HOM05D001992 ORTHO05D002199 1.0e-06 59.7 205 25.9
Rhsim03G0221500 Rhododendron simsii HOM05D001992 ORTHO05D002199 1.0e-06 59.7 188 27.7
Zm00001eb252170 Zea mays HOM05D001992 ORTHO05D002199 1.0e-06 59.7 251 26.3
Actinidia34307 Actinidia chinensis HOM05D001992 ORTHO05D002199 1.3e-06 59.3 188 28.2
A01p02310 Brassica napus HOM05D001992 ORTHO05D002199 1.3e-06 59.3 202 27.7
C01p02520 Brassica napus HOM05D001992 ORTHO05D002199 1.3e-06 59.3 218 27.1
BolC1t00240H Brassica oleracea HOM05D001992 ORTHO05D002199 1.3e-06 59.3 218 27.1
BraA01t04596Z Brassica rapa HOM05D001992 ORTHO05D002199 1.3e-06 59.3 186 26.9
Cc07_g09630 Coffea canephora HOM05D001992 ORTHO05D002199 1.3e-06 59.3 180 29.4
COL.COLO4_22062 Corchorus olitorius HOM05D001992 ORTHO05D002199 1.3e-06 59.3 203 27.6
ECA232G4477 Erigeron canadensis HOM05D001992 ORTHO05D002199 1.3e-06 59.3 225 27.6
Gohir.A11G183600 Gossypium hirsutum HOM05D001992 ORTHO05D002199 1.3e-06 59.3 207 28.0
Gorai.007G202400 Gossypium raimondii HOM05D001992 ORTHO05D002199 1.3e-06 59.3 207 28.0
Manes.02G094700 Manihot esculenta HOM05D001992 ORTHO05D002199 1.3e-06 59.3 208 26.4
TWI60G1475 Tripterygium wilfordii HOM05D001992 ORTHO05D002199 1.3e-06 59.3 204 26.0
TAR375G0021 Trochodendron aralioides HOM05D001992 ORTHO05D002199 1.3e-06 59.3 187 27.8
CsaV3_2G036040 Cucumis sativus L. HOM05D001992 ORTHO05D002199 1.7e-06 58.9 210 26.7
DCAR_009012 Daucus carota HOM05D001992 ORTHO05D002199 1.7e-06 58.9 205 27.8
PSO210G7389 Papaver somniferum HOM05D001992 ORTHO05D002199 1.7e-06 58.9 205 28.8
vmacro06511 Vaccinium macrocarpon HOM05D001992 ORTHO05D002199 1.7e-06 58.9 188 27.7
MSTRG.8574 Avicennia marina HOM05D001992 ORTHO05D002199 2.2e-06 58.5 190 28.9
BcaNung00433 Brassica carinata HOM05D001992 ORTHO05D002199 2.2e-06 58.5 186 27.4
A02p03880 Brassica napus HOM05D001992 ORTHO05D002199 2.2e-06 58.5 262 26.0
A10p22320 Brassica napus HOM05D001992 ORTHO05D002199 2.2e-06 58.5 195 26.7
C09p60160 Brassica napus HOM05D001992 ORTHO05D002199 2.2e-06 58.5 195 26.7
BraA02t05352Z Brassica rapa HOM05D001992 ORTHO05D002199 2.2e-06 58.5 195 26.7
BraA10t44291Z Brassica rapa HOM05D001992 ORTHO05D002199 2.2e-06 58.5 195 26.7
Migut.F00947 Erythranthe guttata HOM05D001992 ORTHO05D002199 2.2e-06 58.5 253 24.9
Gohir.D11G190100 Gossypium hirsutum HOM05D001992 ORTHO05D002199 2.2e-06 58.5 185 29.2
Lsat_1_v5_gn_9_47501 Lactuca sativa HOM05D001992 ORTHO05D002199 2.2e-06 58.5 203 28.6
MBI04_g20980_MAGBIO Magnolia biondii HOM05D001992 ORTHO05D002199 2.2e-06 58.5 186 28.0
Potri.007G023900 Populus trichocarpa HOM05D001992 ORTHO05D002199 2.2e-06 58.5 206 28.2
Potri.011G143300 Populus trichocarpa HOM05D001992 ORTHO05D002199 2.2e-06 58.5 186 27.4
Rhsim08G0118400 Rhododendron simsii HOM05D001992 ORTHO05D002199 2.2e-06 58.5 206 28.2
RhsimUnG0100200 Rhododendron simsii HOM05D001992 ORTHO05D002199 2.2e-06 58.5 206 28.2
Hund09792 Selenicereus undatus HOM05D001992 ORTHO05D002199 2.2e-06 58.5 190 26.8
SGA_v2.0_scaffold54G19544 Striga asiatica HOM05D001992 ORTHO05D002199 2.2e-06 58.5 205 29.3
AT4G36580 Arabidopsis thaliana HOM05D001992 ORTHO05D002199 2.9e-06 58.2 246 27.6
BcaC03g18526 Brassica carinata HOM05D001992 ORTHO05D002199 2.9e-06 58.2 195 27.2
C02p08680 Brassica napus HOM05D001992 ORTHO05D002199 2.9e-06 58.2 195 27.2
BolC2t06784H Brassica oleracea HOM05D001992 ORTHO05D002199 2.9e-06 58.2 195 27.2
BraA01t00219Z Brassica rapa HOM05D001992 ORTHO05D002199 2.9e-06 58.2 202 27.2
CiPaw.05G219800 Carya illinoinensis HOM05D001992 ORTHO05D002199 2.9e-06 58.2 179 28.5
Ca_04184_v3 Cicer arietinum L. HOM05D001992 ORTHO05D002199 2.9e-06 58.2 179 27.4
Dinv39993 Davidia involucrata HOM05D001992 ORTHO05D002199 2.9e-06 58.2 206 27.2
Migut.F00096 Erythranthe guttata HOM05D001992 ORTHO05D002199 2.9e-06 58.2 200 28.0
Thhalv10012943m.g Eutrema salsugineum HOM05D001992 ORTHO05D002199 2.9e-06 58.2 195 26.7
Lj3A887T78 Lonicera japonica HOM05D001992 ORTHO05D002199 2.9e-06 58.2 200 27.0
PSO063G3363 Papaver somniferum HOM05D001992 ORTHO05D002199 2.9e-06 58.2 201 28.4
PSO782G4540 Papaver somniferum HOM05D001992 ORTHO05D002199 2.9e-06 58.2 201 28.4
Sp6g27180 Schrenkiella parvula HOM05D001992 ORTHO05D002199 2.9e-06 58.2 195 26.7
Sc19g0000170 Simmondsia chinensis HOM05D001992 ORTHO05D002199 2.9e-06 58.2 186 28.0
THA.LOC104802922 Tarenaya hassleriana HOM05D001992 ORTHO05D002199 2.9e-06 58.2 196 26.5
GSVIVG01018945001 Vitis vinifera HOM05D001992 ORTHO05D002199 2.9e-06 58.2 184 28.3
AL3G12570 Arabidopsis lyrata HOM05D001992 ORTHO05D002199 3.8e-06 57.8 186 26.3
CARHR244880 Cardamine hirsuta HOM05D001992 ORTHO05D002199 3.8e-06 57.8 202 27.2
ClCG02G007670 Citrullus lanatus HOM05D001992 ORTHO05D002199 3.8e-06 57.8 187 27.3
ECA232G0118 Erigeron canadensis HOM05D001992 ORTHO05D002199 3.8e-06 57.8 200 26.5
HanXRQChr09g0261601 Helianthus annuus HOM05D001992 ORTHO05D002199 3.8e-06 57.8 205 27.3
Lalb_Chr16g0377761 Lupinus albus HOM05D001992 ORTHO05D002199 3.8e-06 57.8 217 26.7
QL09p023805 Quercus lobata HOM05D001992 ORTHO05D002199 3.8e-06 57.8 253 26.5
SalBow2G0164 Salvia bowleyana HOM05D001992 ORTHO05D002199 3.8e-06 57.8 187 26.7
Hund16436 Selenicereus undatus HOM05D001992 ORTHO05D002199 3.8e-06 57.8 208 26.9
Thecc.01G033900 Theobroma cacao HOM05D001992 ORTHO05D002199 3.8e-06 57.8 202 27.7
vmacro17824 Vaccinium macrocarpon HOM05D001992 ORTHO05D002199 3.8e-06 57.8 227 27.8
CSS0028493 Camellia sinensis var. sinensis HOM05D001992 ORTHO05D002199 5.0e-06 57.4 180 29.4
CARHR196220 Cardamine hirsuta HOM05D001992 ORTHO05D002199 5.0e-06 57.4 195 26.2
Ca_04917_v3 Cicer arietinum L. HOM05D001992 ORTHO05D002199 5.0e-06 57.4 190 27.9
Ciclev10019245m.g Citrus clementina HOM05D001992 ORTHO05D002199 5.0e-06 57.4 195 26.7
Cc02_g00270 Coffea canephora HOM05D001992 ORTHO05D002199 5.0e-06 57.4 186 28.0
Dinv29158 Davidia involucrata HOM05D001992 ORTHO05D002199 5.0e-06 57.4 179 28.5
Migut.H00981 Erythranthe guttata HOM05D001992 ORTHO05D002199 5.0e-06 57.4 199 27.6
Gohir.D08G242400 Gossypium hirsutum HOM05D001992 ORTHO05D002199 5.0e-06 57.4 186 27.4
Phvul.005G044000 Phaseolus vulgaris HOM05D001992 ORTHO05D002199 5.0e-06 57.4 180 30.0
Psat1g056480 Pisum sativum HOM05D001992 ORTHO05D002199 5.0e-06 57.4 222 25.7
Zm00001eb187980 Zea mays HOM05D001992 ORTHO05D002199 5.0e-06 57.4 187 26.7
Actinidia36568 Actinidia chinensis HOM05D001992 ORTHO05D002199 6.5e-06 57.0 183 28.4
Aa31LG11G12670 Aethionema arabicum HOM05D001992 ORTHO05D002199 6.5e-06 57.0 195 26.2
Ah.13g076360 Amaranthus hybridus HOM05D001992 ORTHO05D002199 6.5e-06 57.0 201 27.4
ATR0332G070 Amborella trichopoda HOM05D001992 ORTHO05D002199 6.5e-06 57.0 183 28.4
CAN.G53.19 Capsicum annuum HOM05D001992 ORTHO05D002199 6.5e-06 57.0 177 27.7
DCAR_017297 Daucus carota HOM05D001992 ORTHO05D002199 6.5e-06 57.0 206 27.2
Eucgr.I02432 Eucalyptus grandis HOM05D001992 ORTHO05D002199 6.5e-06 57.0 233 26.2
Nn1g01899 Nelumbo nucifera HOM05D001992 ORTHO05D002199 6.5e-06 57.0 186 27.4
SEGI_14542 Sequoiadendron giganteum HOM05D001992 ORTHO05D002199 6.5e-06 57.0 186 28.0
THA.LOC104827214 Tarenaya hassleriana HOM05D001992 ORTHO05D002199 6.5e-06 57.0 196 26.5
Ah.04g156550 Amaranthus hybridus HOM05D001992 ORTHO05D002199 8.5e-06 56.6 189 28.0
AL6G27930 Arabidopsis lyrata HOM05D001992 ORTHO05D002199 8.5e-06 56.6 195 26.2
AUR62002063 Chenopodium quinoa HOM05D001992 ORTHO05D002199 8.5e-06 56.6 191 29.3
AUR62028177 Chenopodium quinoa HOM05D001992 ORTHO05D002199 8.5e-06 56.6 187 29.4
Gorai.004G258100 Gossypium raimondii HOM05D001992 ORTHO05D002199 8.5e-06 56.6 186 27.4
Nn5g29636 Nelumbo nucifera HOM05D001992 ORTHO05D002199 8.5e-06 56.6 201 27.9


User provided reference genes

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