Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 2.6e-92 342.0 175 100.0
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 4.4e-31 138.7 159 46.5
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 2.3e-27 126.3 125 48.0
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 6.6e-19 98.2 121 44.6
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 2.5e-18 96.3 120 42.5
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 3.3e-18 95.9 120 44.2
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 1.2e-17 94.0 159 35.8
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.6e-17 93.6 120 42.5
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.1e-17 93.2 119 42.9
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 2.1e-17 93.2 185 35.7
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 2.8e-17 92.8 141 39.7
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 4.7e-17 92.0 131 40.5
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 8.1e-17 91.3 120 39.2
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 1.1e-16 90.9 116 44.8
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 1.4e-16 90.5 179 34.6
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.4e-16 90.5 141 39.0
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.4e-16 90.5 141 39.0
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 2.3e-16 89.7 119 41.2
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 2.3e-16 89.7 119 41.2
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 3.1e-16 89.4 150 36.7
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 3.1e-16 89.4 119 41.2
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 4.0e-16 89.0 120 40.8
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 4.0e-16 89.0 129 39.5
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 4.0e-16 89.0 116 44.0
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 5.2e-16 88.6 112 40.2
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 5.2e-16 88.6 141 38.3
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 5.2e-16 88.6 120 41.7
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 6.8e-16 88.2 150 36.0
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 6.8e-16 88.2 140 37.1
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 6.8e-16 88.2 111 42.3
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 6.8e-16 88.2 140 38.6
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 6.8e-16 88.2 120 41.7
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 6.8e-16 88.2 120 40.8
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 8.9e-16 87.8 120 41.7
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 1.2e-15 87.4 127 40.2
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 1.2e-15 87.4 127 40.2
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.2e-15 87.4 116 41.4
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.2e-15 87.4 125 38.4
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.2e-15 87.4 153 37.3
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.2e-15 87.4 120 42.5
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.2e-15 87.4 120 40.8
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 1.2e-15 87.4 120 41.7
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 1.5e-15 87.0 140 36.4
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 1.5e-15 87.0 139 38.8
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 1.5e-15 87.0 179 33.0
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 1.5e-15 87.0 150 37.3
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 1.5e-15 87.0 143 33.6
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 2.0e-15 86.7 127 40.2
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 2.0e-15 86.7 127 40.2
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 2.0e-15 86.7 176 33.0
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 2.6e-15 86.3 139 38.1
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 2.6e-15 86.3 133 38.3
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 3.4e-15 85.9 163 34.4
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 3.4e-15 85.9 156 36.5
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 3.4e-15 85.9 127 39.4
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 3.4e-15 85.9 120 40.0
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 3.4e-15 85.9 120 40.0
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 4.4e-15 85.5 127 40.9
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 5.8e-15 85.1 112 41.1
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 5.8e-15 85.1 129 38.0
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 5.8e-15 85.1 124 38.7
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 5.8e-15 85.1 129 38.8
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 7.6e-15 84.7 127 38.6
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 7.6e-15 84.7 157 32.5
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 7.6e-15 84.7 111 41.4
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 7.6e-15 84.7 120 40.0
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 9.9e-15 84.3 112 38.4
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 9.9e-15 84.3 120 37.5
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 1.3e-14 84.0 173 36.4
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.3e-14 84.0 129 38.0
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 1.7e-14 83.6 177 33.3
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.7e-14 83.6 163 33.7
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 2.2e-14 83.2 127 37.8
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 2.2e-14 83.2 120 38.3
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 2.9e-14 82.8 127 38.6
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 3.7e-14 82.4 178 34.3
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 3.7e-14 82.4 111 40.5
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 3.7e-14 82.4 118 39.0
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 3.7e-14 82.4 122 40.2
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 3.7e-14 82.4 156 36.5
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 3.7e-14 82.4 116 41.4
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 3.7e-14 82.4 120 38.3
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 4.9e-14 82.0 129 37.2
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 4.9e-14 82.0 120 39.2
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 4.9e-14 82.0 132 40.2
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 6.4e-14 81.6 120 36.7
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 6.4e-14 81.6 120 39.2
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 8.4e-14 81.3 112 41.1
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 8.4e-14 81.3 112 40.2
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 8.4e-14 81.3 116 39.7
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 8.4e-14 81.3 167 35.9
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 8.4e-14 81.3 127 37.8
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.4e-13 80.5 137 36.5
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.4e-13 80.5 137 36.5
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.4e-13 80.5 137 36.5
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 1.9e-13 80.1 127 35.4
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 3.2e-13 79.3 112 38.4
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 4.1e-13 79.0 141 32.6
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 7.1e-13 78.2 122 37.7
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 9.2e-13 77.8 112 38.4
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 9.2e-13 77.8 111 38.7
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 1.2e-12 77.4 126 38.1
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 3.5e-12 75.9 111 37.8
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 6.0e-12 75.1 115 37.4
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 1.0e-11 74.3 119 32.8
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 1.0e-11 74.3 120 33.3
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.3e-11 73.9 128 37.5
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.3e-11 73.9 111 38.7
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 3.9e-11 72.4 127 37.0
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 8.6e-11 71.2 117 33.3
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 7.3e-10 68.2 106 35.8
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 9.6e-10 67.8 156 31.4
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 4.7e-09 65.5 109 33.0
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.2e-06 56.6 90 36.7


User provided reference genes

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