Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0040s0118 Marchantia polymorpha HOM05D004925 ORTHO05D005643 6.7e-236 820.5 466 100.0
Pp3c22_21740 Physcomitrium patens HOM05D004925 ORTHO05D005643 6.7e-26 122.9 350 32.0
SEGI_38326 Sequoiadendron giganteum HOM05D004925 ORTHO05D005643 2.1e-24 117.9 192 40.1
Nn2g15712 Nelumbo nucifera HOM05D004925 ORTHO05D005643 9.0e-23 112.5 160 46.9
MBI19_g23208_MAGBIO Magnolia biondii HOM05D004925 ORTHO05D005643 7.1e-20 102.8 238 34.5
TAR623G0394 Trochodendron aralioides HOM05D004925 ORTHO05D005643 1.2e-19 102.1 162 42.0
SMO137G0159 Selaginella moellendorffii HOM05D004925 ORTHO05D005643 2.7e-19 100.9 128 49.2
CAN.G261.6 Capsicum annuum HOM05D004925 ORTHO05D005643 3.5e-19 100.5 170 41.8
CDE04G0753 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 1.3e-18 98.6 156 44.2
Manes.10G151100 Manihot esculenta HOM05D004925 ORTHO05D005643 3.9e-18 97.1 168 37.5
Potri.001G229800 Populus trichocarpa HOM05D004925 ORTHO05D005643 3.9e-18 97.1 398 29.9
SalBow4G1354 Salvia bowleyana HOM05D004925 ORTHO05D005643 6.7e-18 96.3 142 42.3
TAR369G0809 Trochodendron aralioides HOM05D004925 ORTHO05D005643 6.7e-18 96.3 165 41.2
Peaxi162Scf00878g00036 Petunia axillaris HOM05D004925 ORTHO05D005643 8.7e-18 95.9 167 41.9
SalBow4G3044 Salvia bowleyana HOM05D004925 ORTHO05D005643 8.7e-18 95.9 142 42.3
CiPaw.13G000800 Carya illinoinensis HOM05D004925 ORTHO05D005643 1.1e-17 95.5 172 40.7
Eucgr.G03409 Eucalyptus grandis HOM05D004925 ORTHO05D005643 1.9e-17 94.7 142 45.1
Dinv43931 Davidia involucrata HOM05D004925 ORTHO05D005643 2.5e-17 94.4 165 38.2
HanXRQChr11g0341651 Helianthus annuus HOM05D004925 ORTHO05D005643 2.5e-17 94.4 158 40.5
Oeu053533.1 Olea europaea HOM05D004925 ORTHO05D005643 4.3e-17 93.6 198 38.4
HanXRQChr11g0341641 Helianthus annuus HOM05D004925 ORTHO05D005643 5.7e-17 93.2 162 39.5
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 5.7e-17 93.2 152 41.4
Cc02_g27070 Coffea canephora HOM05D004925 ORTHO05D005643 7.4e-17 92.8 276 31.2
SGA_v2.0_scaffold95G28775 Striga asiatica HOM05D004925 ORTHO05D005643 7.4e-17 92.8 165 43.0
Aqoxy1G00133 Aquilegia oxysepala HOM05D004925 ORTHO05D005643 9.6e-17 92.4 257 30.4
MSTRG.5000 Avicennia marina HOM05D004925 ORTHO05D005643 1.3e-16 92.0 157 41.4
Atru.chr11.2695 Acer truncatum HOM05D004925 ORTHO05D005643 2.1e-16 91.3 135 43.0
Migut.N01664 Erythranthe guttata HOM05D004925 ORTHO05D005643 2.1e-16 91.3 165 40.0
Dinv43491 Davidia involucrata HOM05D004925 ORTHO05D005643 2.8e-16 90.9 164 40.2
TWI09G1281 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 3.7e-16 90.5 230 32.6
TWI73G1095 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 4.8e-16 90.1 168 36.9
Cfa004806 Carpinus fangiana HOM05D004925 ORTHO05D005643 6.3e-16 89.7 248 33.1
FAN01G0312 Fragaria x ananassa HOM05D004925 ORTHO05D005643 1.4e-15 88.6 213 32.4
HanXRQChr11g0341871 Helianthus annuus HOM05D004925 ORTHO05D005643 1.4e-15 88.6 143 39.9
Sopen01g033490 Solanum pennellii HOM05D004925 ORTHO05D005643 1.4e-15 88.6 346 28.3
Gohir.A08G026720 Gossypium hirsutum HOM05D004925 ORTHO05D005643 1.8e-15 88.2 148 37.2
Gorai.004G035400 Gossypium raimondii HOM05D004925 ORTHO05D005643 1.8e-15 88.2 148 37.2
MD02G1318600 Malus domestica HOM05D004925 ORTHO05D005643 1.8e-15 88.2 175 36.6
CANSAT11G0505 Cannabis sativa HOM05D004925 ORTHO05D005643 3.1e-15 87.4 228 33.3
FAN03G1097 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.1e-15 87.0 167 36.5
Rhsim01G0134400 Rhododendron simsii HOM05D004925 ORTHO05D005643 4.1e-15 87.0 241 33.2
RcHm_v2.0_Chr1g0313411 Rosa chinensis HOM05D004925 ORTHO05D005643 4.1e-15 87.0 166 37.3
Lsat_1_v5_gn_1_110881 Lactuca sativa HOM05D004925 ORTHO05D005643 5.3e-15 86.7 243 32.5
Sc17g0006850 Simmondsia chinensis HOM05D004925 ORTHO05D005643 5.3e-15 86.7 165 38.2
Cpa.g.sc189.17 Carica papaya HOM05D004925 ORTHO05D005643 9.0e-15 85.9 132 42.4
Gohir.D08G037401 Gossypium hirsutum HOM05D004925 ORTHO05D005643 9.0e-15 85.9 148 37.2
HanXRQChr01g0018661 Helianthus annuus HOM05D004925 ORTHO05D005643 1.2e-14 85.5 159 37.7
GSVIVG01001367001 Vitis vinifera HOM05D004925 ORTHO05D005643 1.5e-14 85.1 168 38.1
Solyc01g073920.3 Solanum lycopersicum HOM05D004925 ORTHO05D005643 2.0e-14 84.7 343 28.0
ClCG10G012660 Citrullus lanatus HOM05D004925 ORTHO05D005643 2.6e-14 84.3 141 41.1
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 2.6e-14 84.3 138 42.0
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 2.6e-14 84.3 138 42.0
Medtr2g060910 Medicago truncatula HOM05D004925 ORTHO05D005643 2.6e-14 84.3 158 37.3
Thecc.01G416300 Theobroma cacao HOM05D004925 ORTHO05D005643 2.6e-14 84.3 163 36.2
CBR_g45842 Chara braunii HOM05D004925 ORTHO05D005643 3.4e-14 84.0 207 32.4
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea HOM05D004925 ORTHO05D005643 4.5e-14 83.6 165 33.3
ECA248G0029 Erigeron canadensis HOM05D004925 ORTHO05D005643 4.5e-14 83.6 169 36.1
FvH4_7g00160 Fragaria vesca HOM05D004925 ORTHO05D005643 4.5e-14 83.6 147 36.7
FAN01G2076 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.5e-14 83.6 236 30.5
FAN06G2494 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.5e-14 83.6 147 36.7
FAN10G2396 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.5e-14 83.6 147 36.7
C05p03080 Brassica napus HOM05D004925 ORTHO05D005643 5.9e-14 83.2 299 30.8
MD07G1002600 Malus domestica HOM05D004925 ORTHO05D005643 5.9e-14 83.2 375 29.6
Lalb_Chr03g0033881 Lupinus albus HOM05D004925 ORTHO05D005643 7.6e-14 82.8 150 38.7
COL.COLO4_25137 Corchorus olitorius HOM05D004925 ORTHO05D005643 1.0e-13 82.4 204 31.4
Ca_02951_v3 Cicer arietinum L. HOM05D004925 ORTHO05D005643 1.7e-13 81.6 185 32.4
Sed0003173 Sechium edule HOM05D004925 ORTHO05D005643 2.2e-13 81.3 148 39.9
THA.LOC104801020 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 2.9e-13 80.9 163 38.0
Zm00001eb399260 Zea mays HOM05D004925 ORTHO05D005643 2.9e-13 80.9 152 37.5
PSO384G4128 Papaver somniferum HOM05D004925 ORTHO05D005643 8.5e-13 79.3 152 38.2
Actinidia15855 Actinidia chinensis HOM05D004925 ORTHO05D005643 1.1e-12 79.0 183 35.5
AagrBONN_evm.TU.Sc2ySwM_340.484 Anthoceros agrestis HOM05D004925 ORTHO05D005643 1.9e-12 78.2 155 37.4
AL4G28340 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 1.9e-12 78.2 161 36.6
Lj3g0011601 Lotus japonicus HOM05D004925 ORTHO05D005643 1.9e-12 78.2 198 31.8
Nitab4.5_0000892g0140 Nicotiana tabacum HOM05D004925 ORTHO05D005643 1.9e-12 78.2 190 35.8
ATR0598G164 Amborella trichopoda HOM05D004925 ORTHO05D005643 2.5e-12 77.8 159 34.6
Phvul.005G039900 Phaseolus vulgaris HOM05D004925 ORTHO05D005643 2.5e-12 77.8 167 32.9
unitig_22.g5889 Utricularia gibba HOM05D004925 ORTHO05D005643 2.5e-12 77.8 149 36.9
Carub.0004s1427 Capsella rubella HOM05D004925 ORTHO05D005643 3.2e-12 77.4 150 38.7
Glyma.08G148900 Glycine max HOM05D004925 ORTHO05D005643 3.2e-12 77.4 173 33.5
Glyma.15G269200 Glycine max HOM05D004925 ORTHO05D005643 3.2e-12 77.4 188 33.0
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea HOM05D004925 ORTHO05D005643 4.2e-12 77.0 165 33.3
AT2G32840 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 5.5e-12 76.6 161 36.0
BraA05t20219Z Brassica rapa HOM05D004925 ORTHO05D005643 7.2e-12 76.3 162 35.2
CsaV3_3G032460 Cucumis sativus L. HOM05D004925 ORTHO05D005643 1.6e-11 75.1 317 29.3
Hund25510 Selenicereus undatus HOM05D004925 ORTHO05D005643 1.6e-11 75.1 339 28.3
QL04p000066 Quercus lobata HOM05D004925 ORTHO05D005643 2.1e-11 74.7 152 35.5
Sp4g15220 Schrenkiella parvula HOM05D004925 ORTHO05D005643 2.1e-11 74.7 316 28.8
CARHR126790 Cardamine hirsuta HOM05D004925 ORTHO05D005643 2.7e-11 74.3 309 29.1
Duzib114G0283 Durio zibethinus HOM05D004925 ORTHO05D005643 2.7e-11 74.3 164 32.3
Thhalv10016920m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 3.6e-11 73.9 316 27.8
Actinidia21578 Actinidia chinensis HOM05D004925 ORTHO05D005643 6.1e-11 73.2 148 37.2
BcaB01g00977 Brassica carinata HOM05D004925 ORTHO05D005643 6.1e-11 73.2 145 35.2
TPR.G11699 Trifolium pratense HOM05D004925 ORTHO05D005643 7.9e-11 72.8 141 35.5
BolC5t29090H Brassica oleracea HOM05D004925 ORTHO05D005643 1.8e-10 71.6 322 28.9
BcaB02g10501 Brassica carinata HOM05D004925 ORTHO05D005643 2.3e-10 71.2 262 29.4
BraA10t42612Z Brassica rapa HOM05D004925 ORTHO05D005643 2.3e-10 71.2 371 26.4
Ciclev10032226m.g Citrus clementina HOM05D004925 ORTHO05D005643 2.3e-10 71.2 202 31.7
C04p16720 Brassica napus HOM05D004925 ORTHO05D005643 3.0e-10 70.9 160 35.0
Oeu024926.1 Olea europaea HOM05D004925 ORTHO05D005643 3.9e-10 70.5 225 29.8
Thhalv10009447m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 5.1e-10 70.1 161 36.0
vmacro12585 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 5.1e-10 70.1 347 28.8
A10p03360 Brassica napus HOM05D004925 ORTHO05D005643 8.7e-10 69.3 372 27.4
Aa31LG5G4490 Aethionema arabicum HOM05D004925 ORTHO05D005643 1.1e-09 68.9 310 29.0
A05p12810 Brassica napus HOM05D004925 ORTHO05D005643 1.1e-09 68.9 292 28.8
Sp1g03770 Schrenkiella parvula HOM05D004925 ORTHO05D005643 1.5e-09 68.6 295 28.1
BolC4t23220H Brassica oleracea HOM05D004925 ORTHO05D005643 1.9e-09 68.2 263 29.7
Medtr4g125960 Medicago truncatula HOM05D004925 ORTHO05D005643 1.9e-09 68.2 161 32.3
PGR119G0958 Punica granatum HOM05D004925 ORTHO05D005643 1.9e-09 68.2 227 30.0
AUR62015612 Chenopodium quinoa HOM05D004925 ORTHO05D005643 5.7e-09 66.6 130 38.5
QL04p003160 Quercus lobata HOM05D004925 ORTHO05D005643 7.4e-09 66.2 200 29.5
CARHR004330 Cardamine hirsuta HOM05D004925 ORTHO05D005643 3.7e-08 63.9 161 31.1
Prupe.2G004100 Prunus persica HOM05D004925 ORTHO05D005643 6.3e-08 63.2 145 32.4
Sabra16G0137200 Salix brachista HOM05D004925 ORTHO05D005643 8.2e-08 62.8 92 43.5
THA.LOC104816029 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 1.4e-07 62.0 135 34.8
PSO339G6120 Papaver somniferum HOM05D004925 ORTHO05D005643 1.8e-07 61.6 150 33.3
vmacro21158 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 4.1e-07 60.5 98 37.8
HanXRQChr11g0341671 Helianthus annuus HOM05D004925 ORTHO05D005643 5.3e-07 60.1 95 41.1
Lalb_Chr25g0283541 Lupinus albus HOM05D004925 ORTHO05D005643 6.9e-07 59.7 200 30.0
AT1G04930 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 1.2e-06 58.9 153 32.0
Sed0010000 Sechium edule HOM05D004925 ORTHO05D005643 1.2e-06 58.9 319 26.6
HPP92_020314 Vanilla planifolia HOM05D004925 ORTHO05D005643 1.2e-06 58.9 154 33.1
SGA_v2.0_scaffold4G02236 Striga asiatica HOM05D001227 ORTHO05D001082 1.5e-06 58.5 191 31.9
SEGI_17188 Sequoiadendron giganteum HOM05D004925 ORTHO05D005643 4.5e-06 57.0 91 39.6


User provided reference genes

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