Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0040s0095 Marchantia polymorpha HOM05D012277 ORTHO05D000114 6.7e-90 334.0 164 100.0
Mapoly0131s0015 Marchantia polymorpha HOM05D012277 ORTHO05D000114 1.0e-13 80.9 155 32.3
SMO141G0292 Selaginella moellendorffii HOM05D000322 ORTHO05D010483 3.9e-13 79.0 155 35.5
SMO332G0032 Selaginella moellendorffii HOM05D008409 ORTHO05D000186 8.7e-13 77.8 138 38.4
Sed0020136 Sechium edule HOM05D000197 ORTHO05D000114 3.3e-12 75.9 152 28.9
SEGI_04347 Sequoiadendron giganteum HOM05D000197 ORTHO05D000114 3.3e-12 75.9 152 28.9
Ca_22763_v3 Cicer arietinum L. HOM05D000197 ORTHO05D000114 4.3e-12 75.5 144 30.6
Psat4g125760 Pisum sativum HOM05D000197 ORTHO05D000114 5.6e-12 75.1 146 32.2
Mapoly0131s0013 Marchantia polymorpha HOM05D008409 ORTHO05D010483 1.2e-11 73.9 147 34.7
SMO337G0049 Selaginella moellendorffii HOM05D000322 ORTHO05D000186 1.6e-11 73.6 155 30.3
Pp3c13_23010 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.8e-11 72.8 148 33.1
Pp3c13_23030 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.8e-11 72.8 148 33.1
HPP92_010019 Vanilla planifolia HOM05D000197 ORTHO05D000114 8.1e-11 71.2 145 31.7
TPR.G25548 Trifolium pratense HOM05D000197 ORTHO05D000114 1.4e-10 70.5 149 30.9
HPP92_015289 Vanilla planifolia HOM05D000197 ORTHO05D000114 1.4e-10 70.5 145 31.7
ClCG05G025130 Citrullus lanatus HOM05D000197 ORTHO05D000114 1.8e-10 70.1 156 28.8
Mapoly0151s0036 Marchantia polymorpha HOM05D000322 ORTHO05D000186 3.1e-10 69.3 151 29.8
MBI15_g00934_MAGBIO Magnolia biondii HOM05D000197 ORTHO05D000114 5.2e-10 68.6 143 29.4
MELO3C012016.2 Cucumis melo HOM05D000197 ORTHO05D000114 2.6e-09 66.2 150 26.7
MD13G1088200 Malus domestica HOM05D000197 ORTHO05D000114 2.6e-09 66.2 124 33.9
Cfa009126 Carpinus fangiana HOM05D000197 ORTHO05D000114 3.4e-09 65.9 146 27.4
Aa31LG7G7810 Aethionema arabicum HOM05D000197 ORTHO05D000114 4.4e-09 65.5 143 33.6
Haze_12156 Corylus avellana HOM05D000197 ORTHO05D000114 4.4e-09 65.5 146 27.4
AUR62013976 Chenopodium quinoa HOM05D000197 ORTHO05D000114 5.8e-09 65.1 122 32.8
FAN07G2092 Fragaria x ananassa HOM05D000197 ORTHO05D000114 5.8e-09 65.1 146 28.8
Aqoxy3G00934 Aquilegia oxysepala HOM05D000197 ORTHO05D000114 7.6e-09 64.7 129 28.7
CsaV3_5G031770 Cucumis sativus L. HOM05D000197 ORTHO05D000114 7.6e-09 64.7 150 25.3
FvH4_4g34890 Fragaria vesca HOM05D000197 ORTHO05D000114 7.6e-09 64.7 146 28.1
FAN12G1601 Fragaria x ananassa HOM05D000197 ORTHO05D000114 7.6e-09 64.7 146 28.1
Rhsim12G0123000 Rhododendron simsii HOM05D000197 ORTHO05D000114 7.6e-09 64.7 122 30.3
AagrBONN_evm.TU.Sc2ySwM_228.4478 Anthoceros agrestis HOM05D008409 ORTHO05D010483 9.9e-09 64.3 135 31.1
Migut.L01436 Erythranthe guttata HOM05D000197 ORTHO05D000114 1.3e-08 63.9 156 26.9
FAN17G2379 Fragaria x ananassa HOM05D000197 ORTHO05D000114 1.3e-08 63.9 146 28.1
SEGI_36997 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 1.3e-08 63.9 164 29.9
AUR62005328 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.7e-08 63.5 122 32.0
Dinv24891 Davidia involucrata HOM05D000197 ORTHO05D000114 1.7e-08 63.5 146 28.1
vmacro16272 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 1.7e-08 63.5 147 29.3
Sc04g0008950 Simmondsia chinensis HOM05D000197 ORTHO05D000114 2.2e-08 63.2 145 26.2
Aqoxy3G00935 Aquilegia oxysepala HOM05D000197 ORTHO05D000114 3.8e-08 62.4 129 29.5
CAN.G205.30 Capsicum annuum HOM05D000197 ORTHO05D000114 4.9e-08 62.0 147 25.9
Pp3c2_27350 Physcomitrium patens HOM05D012277 ORTHO05D010483 4.9e-08 62.0 163 27.6
MSTRG.611 Avicennia marina HOM05D000197 ORTHO05D000114 6.4e-08 61.6 155 27.1
Nitab4.5_0001474g0070 Nicotiana tabacum HOM05D000197 ORTHO05D000114 6.4e-08 61.6 147 23.8
SEGI_25322 Sequoiadendron giganteum HOM05D000322 ORTHO05D000114 6.4e-08 61.6 154 28.6
Zm00001eb080380 Zea mays HOM05D000197 ORTHO05D000114 6.4e-08 61.6 155 26.5
Mapoly0064s0061 Marchantia polymorpha HOM05D008409 ORTHO05D010032 8.4e-08 61.2 153 30.1
Os04g0465600 Oryza sativa ssp. japonica HOM05D000197 ORTHO05D000114 8.4e-08 61.2 160 27.5
Peaxi162Scf00421g00328 Petunia axillaris HOM05D000197 ORTHO05D000114 1.1e-07 60.8 149 24.8
SalBow2G0185 Salvia bowleyana HOM05D000197 ORTHO05D000114 1.1e-07 60.8 153 23.5
SEGI_30515 Sequoiadendron giganteum HOM05D000197 ORTHO05D000114 1.1e-07 60.8 154 28.6
Atru.chr11.1977 Acer truncatum HOM05D000197 ORTHO05D000114 1.4e-07 60.5 146 26.7
CiPaw.05G148600 Carya illinoinensis HOM05D000197 ORTHO05D000114 1.4e-07 60.5 143 25.9
Solyc05g005865.1 Solanum lycopersicum HOM05D000197 ORTHO05D000114 1.9e-07 60.1 150 26.0
Dinv31005 Davidia involucrata HOM05D000197 ORTHO05D000114 2.4e-07 59.7 146 26.7
Dinv31097 Davidia involucrata HOM05D000197 ORTHO05D000114 2.4e-07 59.7 146 26.7
Lj3A1050T27 Lonicera japonica HOM05D000197 ORTHO05D000114 2.4e-07 59.7 137 25.5
MD16G1088600 Malus domestica HOM05D000197 ORTHO05D000114 2.4e-07 59.7 137 27.0
RcHm_v2.0_Chr4g0444321 Rosa chinensis HOM05D000197 ORTHO05D000114 2.4e-07 59.7 146 24.7
PGSC0003DMG400004131 Solanum tuberosum HOM05D000197 ORTHO05D000114 2.4e-07 59.7 150 24.0
TAR374G0922 Trochodendron aralioides HOM05D000197 ORTHO05D000114 2.4e-07 59.7 143 28.0
Ciclev10032973m.g Citrus clementina HOM05D000197 ORTHO05D000114 3.2e-07 59.3 151 29.1
Prupe.1G258100 Prunus persica HOM05D000197 ORTHO05D000114 3.2e-07 59.3 145 26.9
SEGI_09675 Sequoiadendron giganteum HOM05D000197 ORTHO05D000114 3.2e-07 59.3 154 27.3
TAR622G0730 Trochodendron aralioides HOM05D000197 ORTHO05D000114 3.2e-07 59.3 150 26.7
Actinidia15014 Actinidia chinensis HOM05D000197 ORTHO05D000114 4.2e-07 58.9 136 25.7
CSS0039522 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 4.2e-07 58.9 149 27.5
CiPaw.06G073000 Carya illinoinensis HOM05D000197 ORTHO05D000114 4.2e-07 58.9 137 27.0
Nitab4.5_0005555g0020 Nicotiana tabacum HOM05D000197 ORTHO05D000114 4.2e-07 58.9 147 23.1
unitig_22.g6474 Utricularia gibba HOM05D000197 ORTHO05D000114 4.2e-07 58.9 153 26.8
vmacro16271 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 4.2e-07 58.9 147 26.5
Hma1.2p1_1017F.1_g248290 Hydrangea macrophylla HOM05D000197 ORTHO05D000114 5.4e-07 58.5 137 27.0
Lsat_1_v5_gn_3_48941 Lactuca sativa HOM05D000197 ORTHO05D000114 5.4e-07 58.5 153 26.8
Pp3c10_2750 Physcomitrium patens HOM05D012277 ORTHO05D010483 5.4e-07 58.5 146 28.8
Pp3c10_2760 Physcomitrium patens HOM05D012277 ORTHO05D010483 5.4e-07 58.5 146 28.8
Ah.03g132470 Amaranthus hybridus HOM05D000197 ORTHO05D000114 7.1e-07 58.2 122 27.0
Sabra10G0068600 Salix brachista HOM05D000197 ORTHO05D000114 9.3e-07 57.8 111 29.7
Sopen05g001890 Solanum pennellii HOM05D000197 ORTHO05D000114 9.3e-07 57.8 143 26.6
EL10Ac6g13631 Beta vulgaris HOM05D000197 ORTHO05D000114 1.2e-06 57.4 129 24.8
SalBow2G1202 Salvia bowleyana HOM05D000197 ORTHO05D000114 1.2e-06 57.4 137 23.4
arahy.Tifrunner.gnm1.ann1.WD2ETH Arachis hypogaea HOM05D000197 ORTHO05D000114 1.6e-06 57.0 143 25.9
Cc11_g14370 Coffea canephora HOM05D000197 ORTHO05D000114 1.6e-06 57.0 151 29.1
FAN17G1064 Fragaria x ananassa HOM05D000197 ORTHO05D000114 1.6e-06 57.0 153 28.1
TAR622G0624 Trochodendron aralioides HOM05D000197 ORTHO05D000114 1.6e-06 57.0 145 29.7
GSVIVG01011733001 Vitis vinifera HOM05D000197 ORTHO05D000114 1.6e-06 57.0 141 28.4
Lj3A1049T59 Lonicera japonica HOM05D000197 ORTHO05D000114 2.1e-06 56.6 134 23.1
RcHm_v2.0_Chr4g0441741 Rosa chinensis HOM05D000197 ORTHO05D000114 2.1e-06 56.6 153 28.1
arahy.Tifrunner.gnm1.ann1.GR2U56 Arachis hypogaea HOM05D000197 ORTHO05D000114 2.7e-06 56.2 143 25.2
CARHR024320 Cardamine hirsuta HOM05D000197 ORTHO05D000114 2.7e-06 56.2 118 33.1
ECA246G2358 Erigeron canadensis HOM05D000197 ORTHO05D000114 2.7e-06 56.2 156 23.7
Lj2g0009876 Lotus japonicus HOM05D000197 ORTHO05D000114 2.7e-06 56.2 146 27.4
Lalb_Chr16g0382431 Lupinus albus HOM05D000197 ORTHO05D000114 3.5e-06 55.8 150 27.3
PSO017G0582 Papaver somniferum HOM05D000197 ORTHO05D000114 3.5e-06 55.8 118 33.1
QL03p062127 Quercus lobata HOM05D000197 ORTHO05D000114 3.5e-06 55.8 148 29.1
SalBow8G3636 Salvia bowleyana HOM05D000197 ORTHO05D000114 3.5e-06 55.8 143 27.3
Manes.05G090000 Manihot esculenta HOM05D000197 ORTHO05D000114 4.6e-06 55.5 147 27.9
Nn4g22865 Nelumbo nucifera HOM05D000197 ORTHO05D000114 4.6e-06 55.5 151 23.8
PGR119G0429 Punica granatum HOM05D000197 ORTHO05D000114 4.6e-06 55.5 142 28.2
GSVIVG01020183001 Vitis vinifera HOM05D000197 ORTHO05D000114 4.6e-06 55.5 156 24.4
arahy.Tifrunner.gnm1.ann1.M7WURA Arachis hypogaea HOM05D000197 ORTHO05D000114 6.0e-06 55.1 117 29.1
FvH4_4g32760 Fragaria vesca HOM05D000197 ORTHO05D000114 6.0e-06 55.1 153 27.5
FAN12G1963 Fragaria x ananassa HOM05D000197 ORTHO05D000114 6.0e-06 55.1 153 27.5
HanXRQChr11g0351041 Helianthus annuus HOM05D000197 ORTHO05D000114 6.0e-06 55.1 153 25.5
PSO478G4376 Papaver somniferum HOM05D000197 ORTHO05D000114 6.0e-06 55.1 145 25.5
SGA_v2.0_scaffold8G04238 Striga asiatica HOM05D000197 ORTHO05D000114 6.0e-06 55.1 145 24.8
BcaB03g14124 Brassica carinata HOM05D000197 ORTHO05D000114 7.8e-06 54.7 149 28.9
BcaC06g35074 Brassica carinata HOM05D000197 ORTHO05D000114 7.8e-06 54.7 149 28.2
A07p13670 Brassica napus HOM05D000197 ORTHO05D000114 7.8e-06 54.7 149 28.2
BraA07t29119Z Brassica rapa HOM05D000197 ORTHO05D000114 7.8e-06 54.7 149 28.2
Gohir.A01G139500 Gossypium hirsutum HOM05D000197 ORTHO05D000114 7.8e-06 54.7 150 28.0
Gohir.D01G130000 Gossypium hirsutum HOM05D000197 ORTHO05D000114 7.8e-06 54.7 150 28.0
Potri.010G096000 Populus trichocarpa HOM05D000197 ORTHO05D000114 7.8e-06 54.7 104 30.8


User provided reference genes

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