Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.9e-231 805.4 399 100.0
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 4.7e-222 774.2 396 97.2
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 7.7e-140 501.1 343 72.9
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 2.1e-129 466.5 345 66.4
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 6.3e-126 454.9 296 73.0
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.6e-124 450.3 334 65.9
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 7.2e-122 441.4 359 61.6
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 9.5e-122 441.0 331 65.6
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.1e-121 439.9 359 61.3
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 6.1e-121 438.3 319 66.5
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 3.0e-120 436.0 307 66.4
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 3.0e-120 436.0 367 58.3
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 4.0e-120 435.6 332 63.0
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 5.2e-120 435.3 305 66.2
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 6.8e-120 434.9 322 64.3
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 8.9e-120 434.5 298 67.1
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 2.6e-119 433.0 310 65.5
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 2.6e-119 433.0 291 68.7
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 3.4e-119 432.6 354 59.0
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 3.4e-119 432.6 302 67.2
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 4.4e-119 432.2 359 59.3
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 4.4e-119 432.2 336 61.6
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 4.4e-119 432.2 351 61.5
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 5.7e-119 431.8 343 61.8
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 5.7e-119 431.8 293 66.6
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 7.5e-119 431.4 310 65.2
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 7.5e-119 431.4 310 65.5
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 1.3e-118 430.6 352 60.8
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.3e-118 430.6 303 66.0
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.3e-118 430.6 303 66.0
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 1.3e-118 430.6 305 65.6
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 1.7e-118 430.3 329 62.9
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 1.7e-118 430.3 362 59.4
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 1.7e-118 430.3 291 68.0
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 2.2e-118 429.9 303 66.7
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.2e-118 429.9 303 66.0
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 2.2e-118 429.9 316 63.9
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 2.2e-118 429.9 325 62.8
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 2.2e-118 429.9 357 61.3
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 2.9e-118 429.5 291 67.7
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 3.7e-118 429.1 303 65.7
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 4.9e-118 428.7 358 60.6
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 6.4e-118 428.3 308 64.9
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 8.3e-118 427.9 305 66.2
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 8.3e-118 427.9 342 60.8
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.1e-117 427.6 344 59.9
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.4e-117 427.2 344 59.9
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 1.4e-117 427.2 367 58.0
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.4e-117 426.4 332 60.8
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 4.1e-117 425.6 334 60.8
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 4.1e-117 425.6 322 64.0
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 5.4e-117 425.2 301 65.8
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 9.2e-117 424.5 366 58.2
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 1.2e-116 424.1 302 66.2
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 1.2e-116 424.1 315 63.5
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 1.2e-116 424.1 291 65.6
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 1.6e-116 423.7 312 64.4
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.6e-116 423.7 334 61.4
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 1.6e-116 423.7 293 69.3
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 2.0e-116 423.3 304 65.8
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 2.0e-116 423.3 303 64.4
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 2.7e-116 422.9 357 59.4
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 3.5e-116 422.5 350 60.6
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 3.5e-116 422.5 290 67.6
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 4.6e-116 422.2 355 58.3
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 5.9e-116 421.8 290 68.6
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 5.9e-116 421.8 359 56.8
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 1.7e-115 420.2 367 58.6
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 2.3e-115 419.9 293 67.2
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.3e-115 419.9 300 65.7
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 2.9e-115 419.5 300 65.7
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 2.9e-115 419.5 316 62.0
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 2.9e-115 419.5 305 65.2
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 2.9e-115 419.5 301 64.5
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 5.0e-115 418.7 374 57.8
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 6.6e-115 418.3 300 64.7
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 6.6e-115 418.3 314 63.4
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 6.6e-115 418.3 354 59.0
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 1.5e-114 417.2 287 66.6
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.9e-114 416.8 325 61.2
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 3.3e-114 416.0 307 63.5
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 4.3e-114 415.6 351 58.4
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 4.3e-114 415.6 351 58.4
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 5.6e-114 415.2 291 65.6
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 9.5e-114 414.5 327 59.3
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 1.6e-113 413.7 323 60.7
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 2.1e-113 413.3 366 58.7
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 2.8e-113 412.9 327 59.9
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 3.6e-113 412.5 327 59.9
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 3.6e-113 412.5 291 66.0
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 4.7e-113 412.1 300 64.7
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 8.0e-113 411.4 293 64.8
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 1.0e-112 411.0 349 58.7
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 1.8e-112 410.2 354 58.2
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 6.8e-112 408.3 356 58.4
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 1.3e-110 404.1 288 65.3
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 1.2e-108 397.5 414 52.4
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.6e-108 397.1 351 56.7
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 2.7e-108 396.4 290 63.8
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 3.0e-107 392.9 300 63.0
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.1e-104 384.4 264 68.6
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 1.1e-104 384.4 286 64.7
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 1.8e-104 383.6 328 58.8
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 9.2e-101 371.3 360 53.3
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 1.6e-97 360.5 229 72.9
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 3.6e-89 332.8 292 55.8
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 9.6e-82 308.1 373 46.6
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 1.6e-81 307.4 227 63.9
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 5.8e-79 298.9 182 72.5
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 2.7e-76 290.0 214 63.1
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 3.8e-70 269.6 188 67.0
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 3.9e-67 259.6 195 63.1
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 3.3e-66 256.5 243 55.1
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 9.6e-66 255.0 220 58.6
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 2.4e-64 250.4 239 55.6
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 1.1e-58 231.5 293 45.1
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.4e-37 161.4 244 41.4
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 1.5e-18 98.2 59 69.5
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.0e-15 87.8 66 59.1
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 2.6e-10 70.9 110 40.9
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 2.6e-10 70.9 110 41.8
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 2.7e-07 60.8 37 62.2


User provided reference genes

Program Settings