Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 2.1e-255 885.2 441 100.0
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 4.4e-221 771.2 396 97.2
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.3e-140 503.8 341 73.9
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 1.2e-128 464.2 409 59.7
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.3e-127 460.7 306 72.2
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.7e-124 450.3 332 65.1
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 2.1e-122 443.4 330 66.1
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 6.1e-122 441.8 367 61.6
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 8.0e-122 441.4 359 61.8
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.3e-121 439.9 359 61.6
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 2.0e-120 436.8 300 67.7
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 2.6e-120 436.4 298 67.4
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 2.6e-120 436.4 322 64.6
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 3.4e-120 436.0 307 66.4
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 3.4e-120 436.0 332 63.3
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 3.4e-120 436.0 367 58.6
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 7.5e-120 434.9 291 69.1
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 9.8e-120 434.5 302 67.5
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 1.3e-119 434.1 354 59.6
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 1.3e-119 434.1 317 64.4
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 1.3e-119 434.1 336 61.9
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 1.7e-119 433.7 293 66.9
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 1.7e-119 433.7 359 61.6
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 3.7e-119 432.6 343 62.1
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 3.7e-119 432.6 345 61.2
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 4.9e-119 432.2 352 61.1
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 4.9e-119 432.2 291 68.4
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 6.3e-119 431.8 325 63.1
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 6.3e-119 431.8 351 61.5
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 8.3e-119 431.4 291 68.0
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 8.3e-119 431.4 309 66.0
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 8.3e-119 431.4 300 67.0
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 8.3e-119 431.4 316 64.2
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 8.3e-119 431.4 362 59.7
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 1.4e-118 430.6 308 65.3
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 1.4e-118 430.6 331 63.1
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 1.4e-118 430.6 356 61.5
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 1.8e-118 430.3 314 64.3
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.8e-118 430.3 302 66.6
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.8e-118 430.3 302 66.6
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 1.8e-118 430.3 343 61.2
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.2e-118 429.5 302 66.6
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 4.1e-118 429.1 303 67.0
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 4.1e-118 429.1 302 66.2
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 5.4e-118 428.7 367 58.3
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 5.4e-118 428.7 302 66.2
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 7.0e-118 428.3 350 58.6
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 1.6e-117 427.2 301 66.1
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 2.0e-117 426.8 344 59.9
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 2.0e-117 426.8 322 64.3
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 2.7e-117 426.4 344 59.9
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 2.7e-117 426.4 312 65.1
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.7e-117 426.4 335 60.9
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.7e-117 426.4 353 59.8
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 3.5e-117 426.0 302 66.6
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 3.5e-117 426.0 291 66.0
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 4.5e-117 425.6 308 65.3
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 4.5e-117 425.6 293 69.6
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 5.9e-117 425.2 334 61.7
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 5.9e-117 425.2 315 63.8
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 5.9e-117 425.2 303 64.7
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.0e-116 424.5 306 65.0
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 1.0e-116 424.5 290 67.9
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 1.3e-116 424.1 355 59.4
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 1.3e-116 424.1 297 66.7
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 1.7e-116 423.7 290 69.0
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.3e-116 423.3 355 59.2
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 2.9e-116 422.9 365 56.2
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 5.0e-116 422.2 350 60.6
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 8.6e-116 421.4 300 66.0
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 8.6e-116 421.4 300 65.3
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.1e-115 421.0 316 62.3
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.1e-115 421.0 312 64.4
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.5e-115 420.6 354 59.3
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.5e-115 420.6 297 65.0
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 1.9e-115 420.2 300 65.0
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 1.9e-115 420.2 351 59.0
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 1.9e-115 420.2 351 59.0
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 3.3e-115 419.5 324 63.3
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 3.3e-115 419.5 367 59.1
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 4.3e-115 419.1 287 66.9
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 9.5e-115 417.9 327 60.6
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.2e-114 417.5 327 60.6
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 2.8e-114 416.4 303 64.4
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 3.6e-114 416.0 299 63.9
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 3.6e-114 416.0 345 60.6
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 3.6e-114 416.0 307 63.8
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 6.1e-114 415.2 291 66.7
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.0e-113 414.5 431 51.3
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.0e-113 414.5 327 59.3
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.0e-113 414.5 303 64.7
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 1.8e-113 413.7 326 62.6
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 2.3e-113 413.3 293 65.2
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 3.1e-113 412.9 349 59.0
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 6.8e-113 411.8 354 58.5
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 4.9e-111 405.6 288 65.6
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 4.6e-109 399.1 303 62.4
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 1.7e-108 397.1 414 52.4
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.3e-108 396.7 350 57.1
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 6.6e-108 395.2 300 63.3
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 3.1e-105 386.3 270 67.8
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 3.1e-105 386.3 286 65.0
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 2.6e-104 383.3 328 58.8
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 3.5e-101 372.9 360 53.6
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 3.6e-98 362.8 229 73.4
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 6.2e-90 335.5 292 56.5
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 3.6e-82 309.7 373 46.9
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 3.6e-82 309.7 227 64.3
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 2.9e-79 300.1 182 72.5
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 1.3e-76 291.2 214 63.1
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 2.4e-70 270.4 188 67.6
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 2.5e-67 260.4 195 63.6
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 9.6e-67 258.5 220 59.5
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 2.1e-66 257.3 252 54.0
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 5.8e-64 249.2 239 56.1
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 7.4e-59 232.3 304 44.1
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.5e-38 164.1 244 42.2
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 1.3e-18 98.6 59 69.5
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.7e-15 88.2 66 59.1
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 8.3e-10 69.3 110 40.9
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 1.4e-09 68.6 110 40.9
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 2.3e-07 61.2 37 62.2


User provided reference genes

Program Settings