Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 6.1e-233 810.4 411 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 1.5e-58 231.1 261 48.7
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 5.8e-58 229.2 362 41.4
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 3.2e-56 223.4 331 40.5
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 9.3e-56 221.9 344 41.0
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 9.3e-56 221.9 337 40.1
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 1.0e-54 218.4 346 38.4
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 1.3e-54 218.0 333 39.0
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 3.0e-54 216.9 340 40.6
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 6.7e-54 215.7 347 38.6
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 3.3e-53 213.4 333 39.0
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 4.3e-53 213.0 342 39.5
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 7.4e-53 212.2 318 39.9
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 7.4e-53 212.2 335 41.2
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 2.8e-52 210.3 326 38.7
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 2.8e-52 210.3 278 41.0
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 3.7e-52 209.9 344 39.0
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 3.7e-52 209.9 318 39.9
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 4.8e-52 209.5 337 39.2
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 4.8e-52 209.5 316 40.2
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 6.2e-52 209.1 342 39.2
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 1.1e-51 208.4 340 37.6
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 1.4e-51 208.0 332 38.3
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 2.4e-51 207.2 347 38.3
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 3.1e-51 206.8 343 36.4
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 4.0e-51 206.5 347 38.3
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 5.3e-51 206.1 318 39.6
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 9.0e-51 205.3 340 37.4
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 1.2e-50 204.9 349 34.4
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.2e-50 204.9 287 40.4
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 1.5e-50 204.5 348 39.1
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 2.6e-50 203.8 343 39.1
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 2.6e-50 203.8 310 38.7
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 2.6e-50 203.8 280 41.8
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 3.4e-50 203.4 341 38.7
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 1.3e-49 201.4 341 39.0
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 1.3e-49 201.4 279 41.9
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 1.7e-49 201.1 282 41.8
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 1.7e-49 201.1 354 38.7
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 2.2e-49 200.7 309 37.2
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 2.9e-49 200.3 283 41.0
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 4.9e-49 199.5 358 38.3
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 8.4e-49 198.7 283 40.3
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 8.4e-49 198.7 343 37.6
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 1.1e-48 198.4 345 38.0
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 1.9e-48 197.6 344 36.9
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 1.9e-48 197.6 280 40.0
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.2e-48 196.8 340 38.2
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 4.2e-48 196.4 287 40.8
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 4.2e-48 196.4 349 35.8
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 4.2e-48 196.4 386 36.5
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 5.5e-48 196.1 317 38.8
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 9.3e-48 195.3 244 43.4
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 2.1e-47 194.1 349 37.5
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.5e-47 193.4 339 38.3
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 4.6e-47 193.0 276 41.3
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 6.0e-47 192.6 156 58.3
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 7.9e-47 192.2 347 38.6
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 7.9e-47 192.2 345 38.3
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.0e-46 191.8 347 38.6
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 1.8e-46 191.0 312 36.5
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 1.8e-46 191.0 349 37.0
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 3.0e-46 190.3 311 37.9
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 3.0e-46 190.3 347 38.3
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.0e-46 190.3 346 39.0
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 3.9e-46 189.9 331 37.2
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 1.1e-45 188.3 284 39.1
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 1.5e-45 188.0 350 35.1
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 5.7e-45 186.0 316 38.3
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 9.6e-45 185.3 351 36.8
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 6.3e-44 182.6 277 40.8
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 1.4e-43 181.4 367 35.7
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 4.5e-42 176.4 355 37.2
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.3e-41 174.9 333 35.1
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 2.9e-41 173.7 375 35.7
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 1.1e-40 171.8 277 38.3
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.1e-40 171.8 269 39.0
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 1.4e-40 171.4 285 36.5
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-40 171.4 419 33.9
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 2.1e-39 167.5 404 31.9
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 1.8e-38 164.5 295 36.3
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 3.9e-38 163.3 361 31.6
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 6.7e-38 162.5 298 34.6
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 1.3e-36 158.3 337 33.5
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 6.3e-36 156.0 192 43.2
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 1.3e-33 148.3 316 33.9
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 6.5e-33 146.0 354 32.5
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 6.7e-30 136.0 249 37.8
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 2.2e-28 131.0 392 28.1
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 8.2e-28 129.0 424 27.4
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 2.4e-27 127.5 183 41.5
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 6.9e-27 125.9 381 29.1
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 1.0e-25 122.1 169 37.3
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 1.9e-24 117.9 185 35.7
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 2.7e-23 114.0 184 35.3
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 3.9e-22 110.2 171 35.7
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 4.4e-21 106.7 218 33.9
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 5.7e-21 106.3 221 34.4
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 1.1e-19 102.1 550 24.7
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 4.1e-19 100.1 103 49.5
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 2.0e-18 97.8 253 31.2
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 1.0e-17 95.5 238 29.8
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.6e-15 88.2 136 39.7
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 4.8e-12 76.6 142 37.3
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 9.4e-08 62.4 56 50.0
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 4.7e-07 60.1 39 66.7
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 4.0e-06 57.0 39 66.7


User provided reference genes

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