Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 4.6e-247 857.4 434 100.0
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.6e-130 470.3 366 62.0
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 4.0e-126 455.7 347 63.1
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 6.9e-126 454.9 367 59.4
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 3.8e-124 449.1 358 61.2
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 7.1e-123 444.9 387 57.4
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 4.6e-122 442.2 371 57.1
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 7.9e-122 441.4 371 57.1
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.0e-121 441.0 363 57.3
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 1.0e-121 441.0 363 56.7
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 2.5e-120 436.4 357 57.7
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 2.5e-120 436.4 362 56.4
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 3.3e-120 436.0 367 56.4
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 4.3e-120 435.6 359 57.1
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 7.4e-120 434.9 358 57.0
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 9.6e-120 434.5 364 56.9
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 1.6e-119 433.7 373 56.6
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.8e-119 433.0 363 56.2
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 4.8e-119 432.2 374 55.6
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 6.2e-119 431.8 358 57.8
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.1e-118 431.0 362 56.4
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 1.8e-118 430.3 353 57.2
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.4e-118 429.9 371 56.1
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 2.4e-118 429.9 369 55.0
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 3.1e-118 429.5 364 56.6
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 6.9e-118 428.3 386 53.4
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 6.9e-118 428.3 370 55.1
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 9.0e-118 427.9 367 56.7
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 9.0e-118 427.9 375 53.9
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.5e-117 427.2 373 55.5
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 3.4e-117 426.0 357 57.1
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.4e-117 426.0 371 55.0
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 3.4e-117 426.0 371 55.0
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 4.5e-117 425.6 360 56.4
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 5.8e-117 425.2 369 55.8
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 7.6e-117 424.9 374 54.8
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.0e-116 424.5 364 56.0
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 2.2e-116 423.3 366 54.9
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 2.9e-116 422.9 370 54.3
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 2.9e-116 422.9 377 54.1
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 5.0e-116 422.2 366 54.9
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 5.0e-116 422.2 366 54.9
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 5.0e-116 422.2 360 56.1
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 6.5e-116 421.8 364 54.7
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 6.5e-116 421.8 360 56.7
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 6.5e-116 421.8 385 53.5
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 6.5e-116 421.8 346 59.2
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 8.4e-116 421.4 358 55.3
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.4e-115 420.6 358 55.3
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.4e-115 420.6 402 53.2
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 3.2e-115 419.5 360 54.2
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 4.2e-115 419.1 359 56.8
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 5.5e-115 418.7 374 55.9
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.5e-115 418.7 369 54.2
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 9.3e-115 417.9 378 54.2
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.6e-114 417.2 358 54.7
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 6.1e-114 415.2 360 55.6
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.0e-113 414.5 370 53.8
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 1.8e-113 413.7 345 57.1
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 2.3e-113 413.3 355 54.6
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 3.0e-113 412.9 358 54.5
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 3.0e-113 412.9 360 55.0
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 6.7e-113 411.8 345 56.2
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.1e-112 411.0 373 53.6
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.9e-112 410.2 364 54.7
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 5.7e-112 408.7 368 53.0
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 9.0e-110 401.4 351 56.4
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 2.0e-109 400.2 357 54.9
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 3.4e-109 399.4 362 53.6
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 4.5e-109 399.1 381 52.8
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.3e-108 397.5 377 52.3
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 5.0e-108 395.6 366 54.1
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 6.5e-108 395.2 357 54.3
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 2.5e-107 393.3 338 56.8
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 1.8e-105 387.1 371 50.9
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 5.1e-105 385.6 475 44.4
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 6.7e-105 385.2 364 52.5
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.1e-104 384.4 358 52.8
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 7.4e-104 381.7 410 48.3
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.9e-102 375.2 411 49.1
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 3.8e-100 369.4 366 50.5
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 3.8e-100 369.4 374 50.8
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 8.5e-100 368.2 386 50.0
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 9.4e-99 364.8 340 53.2
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.3e-97 360.1 374 50.3
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.5e-91 340.1 286 57.3
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 6.5e-84 315.5 365 44.9
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 3.2e-83 313.2 381 45.1
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 3.0e-81 306.6 326 50.6
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 2.7e-77 293.5 430 39.5
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.4e-73 281.2 242 54.5
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 1.8e-73 280.8 242 54.5
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 4.0e-73 279.6 372 41.4
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.5e-72 277.7 372 43.3
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.1e-70 271.6 297 46.5
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 8.9e-65 251.9 358 40.2
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 6.6e-44 182.6 164 56.7
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.5e-35 154.1 123 57.7
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.8e-33 147.9 127 55.9
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 6.8e-33 146.0 107 64.5
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 3.8e-31 140.2 137 54.7
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 6.9e-25 119.4 181 38.7
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 9.0e-25 119.0 168 43.5
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 5.4e-22 109.8 367 27.0
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 2.4e-17 94.4 178 35.4
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 1.7e-15 88.2 100 48.0
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 3.8e-15 87.0 113 40.7
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 6.4e-15 86.3 86 44.2
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 6.0e-13 79.7 60 58.3
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 8.7e-12 75.9 227 28.2
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.5e-11 75.1 79 48.1
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 3.3e-11 73.9 73 50.7
MCO09G354 Micromonas commoda HOM05D006894 ORTHO05D008724 9.0e-09 65.9 248 26.6
PRCOL_00007041 Prasinoderma coloniale HOM05D004784 ORTHO05D005762 5.8e-08 63.2 337 25.8
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 2.9e-07 60.8 47 59.6
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 8.4e-07 59.3 99 31.3


User provided reference genes

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