Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 7.4e-75 283.9 153 100.0
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.9e-55 218.8 152 75.7
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 1.1e-54 216.9 152 74.3
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.1e-54 216.9 152 75.0
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.5e-54 216.5 152 75.0
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.5e-54 216.5 152 75.0
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.5e-54 216.5 152 75.0
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.5e-54 216.5 152 75.0
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 4.2e-54 214.9 152 73.7
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 5.5e-54 214.5 152 73.0
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 5.5e-54 214.5 152 73.0
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 7.2e-54 214.2 152 72.4
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 7.2e-54 214.2 152 73.7
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 7.2e-54 214.2 152 72.4
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 7.2e-54 214.2 152 73.0
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 1.2e-53 213.4 152 72.4
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.6e-53 213.0 152 71.7
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 2.1e-53 212.6 152 72.4
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 2.1e-53 212.6 152 72.4
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 2.1e-53 212.6 152 71.7
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 2.1e-53 212.6 152 73.0
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 2.1e-53 212.6 152 73.0
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 2.1e-53 212.6 152 71.7
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 2.1e-53 212.6 152 73.0
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 2.7e-53 212.2 152 72.4
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 2.7e-53 212.2 152 71.7
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.6e-53 211.8 150 72.7
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 3.6e-53 211.8 152 71.7
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 3.6e-53 211.8 152 71.7
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 3.6e-53 211.8 152 73.0
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 3.6e-53 211.8 152 71.7
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 3.6e-53 211.8 152 71.7
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.6e-53 211.8 152 71.1
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.6e-53 211.8 152 71.1
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 4.7e-53 211.5 152 74.3
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 4.7e-53 211.5 152 73.0
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 4.7e-53 211.5 152 71.1
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 6.1e-53 211.1 152 71.1
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 6.1e-53 211.1 152 71.1
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 6.1e-53 211.1 152 71.7
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 6.1e-53 211.1 152 71.7
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 6.1e-53 211.1 152 71.1
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 6.1e-53 211.1 152 72.4
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 8.0e-53 210.7 152 71.1
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 8.0e-53 210.7 152 72.4
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 8.0e-53 210.7 152 72.4
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 1.0e-52 210.3 152 71.7
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.0e-52 210.3 152 71.7
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.4e-52 209.9 152 71.1
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.4e-52 209.9 152 70.4
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 1.4e-52 209.9 152 71.1
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.4e-52 209.9 152 71.7
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 1.4e-52 209.9 152 71.1
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 1.8e-52 209.5 153 67.3
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.8e-52 209.5 150 71.3
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 1.8e-52 209.5 150 71.3
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.8e-52 209.5 152 70.4
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 1.8e-52 209.5 150 70.7
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 2.3e-52 209.1 152 71.1
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 2.3e-52 209.1 152 69.7
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 2.3e-52 209.1 152 70.4
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 3.0e-52 208.8 152 70.4
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 4.0e-52 208.4 152 69.7
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.0e-52 208.4 152 70.4
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 4.0e-52 208.4 152 72.4
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 4.0e-52 208.4 152 69.7
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 5.2e-52 208.0 150 72.0
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 5.2e-52 208.0 152 70.4
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 5.2e-52 208.0 150 72.0
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 6.8e-52 207.6 152 69.7
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 8.8e-52 207.2 152 69.7
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.2e-51 206.8 147 72.8
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.2e-51 206.8 147 73.5
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.2e-51 206.8 147 73.5
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 1.5e-51 206.5 150 71.3
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 1.5e-51 206.5 152 69.1
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.0e-51 206.1 147 72.1
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 2.0e-51 206.1 152 71.7
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.4e-51 205.3 152 67.1
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 3.4e-51 205.3 150 70.7
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 3.4e-51 205.3 152 67.8
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 3.4e-51 205.3 152 68.4
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 5.7e-51 204.5 152 72.4
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 5.7e-51 204.5 152 70.4
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 7.5e-51 204.1 152 69.1
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 7.5e-51 204.1 154 67.5
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 7.5e-51 204.1 154 67.5
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 7.5e-51 204.1 154 67.5
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 9.8e-51 203.8 152 67.1
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 1.7e-50 203.0 151 70.9
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 2.8e-50 202.2 152 67.1
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 2.8e-50 202.2 152 69.1
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 3.7e-50 201.8 152 67.8
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 4.8e-50 201.4 152 69.7
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 4.8e-50 201.4 152 68.4
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 6.3e-50 201.1 152 67.1
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 1.1e-49 200.3 152 69.7
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 1.8e-49 199.5 151 68.9
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 7.0e-49 197.6 151 68.2
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 2.0e-48 196.1 151 66.2
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 2.7e-48 195.7 149 68.5
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 3.5e-48 195.3 151 68.9
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 4.5e-48 194.9 151 68.9
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.0e-47 193.7 151 67.5
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 2.9e-47 192.2 140 70.0
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.9e-47 192.2 151 68.2
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 3.2e-46 188.7 138 69.6
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.6e-45 186.4 139 66.2
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 2.7e-45 185.7 131 70.2
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 8.0e-45 184.1 139 66.2
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.8e-44 183.0 129 72.9
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 3.0e-44 182.2 129 71.3
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.2e-44 181.4 131 69.5
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 2.0e-43 179.5 116 78.4
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 3.4e-43 178.7 118 74.6
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 4.4e-43 178.3 134 69.4
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 4.4e-43 178.3 120 75.0
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 9.2e-41 170.6 119 73.1
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 4.5e-40 168.3 106 80.2
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 2.9e-39 165.6 120 68.3
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 1.2e-37 160.2 106 75.5
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 1.2e-37 160.2 106 75.5
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.3e-34 150.2 128 64.1
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 7.3e-30 134.4 91 72.5
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 9.8e-27 124.0 123 47.2
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.9e-10 68.6 106 40.6


User provided reference genes

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