Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 2.4e-159 565.5 289 100.0
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 7.0e-58 228.4 279 47.7
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 5.0e-56 222.2 173 61.3
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 4.4e-52 209.1 203 52.7
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 1.7e-51 207.2 192 54.7
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 2.2e-51 206.8 204 52.5
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 8.3e-51 204.9 177 56.5
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 1.4e-50 204.1 203 49.8
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 2.4e-50 203.4 199 54.3
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 4.1e-50 202.6 190 52.6
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 4.1e-50 202.6 177 55.9
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 5.4e-50 202.2 177 55.4
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 7.0e-50 201.8 176 55.7
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 7.0e-50 201.8 176 55.7
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 9.1e-50 201.4 194 52.1
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 9.1e-50 201.4 177 54.8
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 1.2e-49 201.1 175 56.6
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 1.2e-49 201.1 201 49.8
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 1.6e-49 200.7 176 56.2
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 2.7e-49 199.9 204 50.5
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 2.7e-49 199.9 179 53.6
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 2.7e-49 199.9 176 56.8
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 4.5e-49 199.1 179 55.3
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 4.5e-49 199.1 194 51.0
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 7.7e-49 198.4 176 56.2
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 7.7e-49 198.4 229 47.2
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.0e-48 198.0 206 49.5
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 1.3e-48 197.6 179 54.7
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 1.3e-48 197.6 202 51.0
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 1.3e-48 197.6 187 52.4
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 1.1e-47 194.5 194 51.5
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.1e-47 194.5 176 53.4
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 1.9e-47 193.7 176 56.8
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 1.9e-47 193.7 194 52.1
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 2.5e-47 193.4 222 47.7
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 2.5e-47 193.4 181 54.7
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 3.3e-47 193.0 195 50.8
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 4.2e-47 192.6 199 50.3
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 9.5e-47 191.4 176 55.7
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 9.5e-47 191.4 196 50.0
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 9.5e-47 191.4 189 51.3
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 1.2e-46 191.0 176 54.5
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 1.6e-46 190.7 189 51.3
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 2.1e-46 190.3 179 51.4
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 2.8e-46 189.9 190 51.1
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 2.8e-46 189.9 187 52.4
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 6.1e-46 188.7 175 53.1
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 1.8e-45 187.2 212 47.2
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 1.8e-45 187.2 176 52.8
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 1.8e-45 187.2 282 40.8
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 2.3e-45 186.8 198 50.0
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 2.3e-45 186.8 176 52.8
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 3.0e-45 186.4 183 49.7
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 4.0e-45 186.0 210 48.1
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 6.8e-45 185.3 201 47.8
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 6.8e-45 185.3 166 52.4
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 8.9e-45 184.9 181 51.4
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 1.2e-44 184.5 199 48.2
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 2.0e-44 183.7 179 51.4
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 2.0e-44 183.7 185 49.7
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.6e-44 183.3 178 51.1
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.6e-44 183.3 197 48.2
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 2.6e-44 183.3 179 51.4
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 4.4e-44 182.6 193 48.7
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 4.4e-44 182.6 283 47.0
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 5.7e-44 182.2 186 50.5
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 5.7e-44 182.2 176 53.4
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 7.5e-44 181.8 227 44.5
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 9.8e-44 181.4 175 52.6
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 9.8e-44 181.4 207 46.4
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 1.7e-43 180.6 189 49.7
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 1.7e-43 180.6 194 46.4
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 4.9e-43 179.1 219 43.4
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 4.9e-43 179.1 180 50.0
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 6.3e-43 178.7 219 46.1
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 8.3e-43 178.3 174 53.4
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 8.3e-43 178.3 175 51.4
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 8.3e-43 178.3 176 51.7
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 3.2e-42 176.4 227 43.2
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 2.7e-41 173.3 219 45.2
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 4.5e-41 172.6 194 46.9
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 2.9e-40 169.9 238 42.4
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 2.9e-40 169.9 179 49.7
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 5.0e-40 169.1 187 46.5
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 1.1e-39 167.9 189 44.4
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 9.5e-39 164.9 176 47.7
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 1.2e-38 164.5 208 44.7
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 2.8e-38 163.3 190 46.3
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 6.1e-38 162.2 142 55.6
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 8.0e-38 161.8 278 39.9
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 8.0e-38 161.8 204 43.6
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 1.0e-37 161.4 214 42.1
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 2.6e-36 156.8 193 46.1
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 5.8e-36 155.6 219 39.7
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 3.7e-35 152.9 168 44.6
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 7.0e-34 148.7 171 45.6
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.3e-32 144.4 170 45.3
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 8.6e-32 141.7 245 35.9
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 9.5e-31 138.3 137 46.7
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 8.0e-30 135.2 111 54.1
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 2.0e-28 130.6 208 38.5
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 2.4e-26 123.6 108 54.6
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 7.3e-23 112.1 197 35.0
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 1.2e-22 111.3 82 59.8
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 4.7e-22 109.4 144 41.7
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 7.6e-20 102.1 103 47.6
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 4.6e-17 92.8 76 53.9
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 6.0e-17 92.4 95 53.7
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 1.7e-11 74.3 94 45.7
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 1.7e-11 74.3 134 35.8
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 1.5e-07 61.2 42 61.9


User provided reference genes

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