Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0039s0015 Marchantia polymorpha HOM05D004383 ORTHO05D005050 1.4e-99 366.3 182 100.0
GSVIVG01035992001 Vitis vinifera HOM05D004383 ORTHO05D005050 4.9e-65 251.5 174 67.2
Pp3c18_15950 Physcomitrium patens HOM05D004383 ORTHO05D005050 6.3e-65 251.1 172 70.3
Potri.006G266300 Populus trichocarpa HOM05D004383 ORTHO05D005050 2.4e-64 249.2 169 68.6
AagrBONN_evm.TU.Sc2ySwM_368.2778 Anthoceros agrestis HOM05D004383 ORTHO05D005050 3.1e-64 248.8 180 69.4
Eucgr.C04036 Eucalyptus grandis HOM05D004383 ORTHO05D005050 5.4e-64 248.1 175 65.7
ATR0580G398 Amborella trichopoda HOM05D004383 ORTHO05D005050 7.0e-64 247.7 173 69.9
SEGI_36915 Sequoiadendron giganteum HOM05D004383 ORTHO05D005050 7.0e-64 247.7 170 67.1
CANSAT64G0435 Cannabis sativa HOM05D004383 ORTHO05D005050 9.2e-64 247.3 170 67.6
PGR044G2662 Punica granatum HOM05D004383 ORTHO05D005050 1.2e-63 246.9 175 66.3
Duzib187G0841 Durio zibethinus HOM05D004383 ORTHO05D005050 1.6e-63 246.5 177 66.1
Manes.16G131700 Manihot esculenta HOM05D004383 ORTHO05D005050 1.6e-63 246.5 169 68.0
Potri.018G016800 Populus trichocarpa HOM05D004383 ORTHO05D005050 1.6e-63 246.5 169 67.5
Prupe.1G396200 Prunus persica HOM05D004383 ORTHO05D005050 1.6e-63 246.5 175 66.3
Hund25610 Selenicereus undatus HOM05D004383 ORTHO05D005050 1.6e-63 246.5 180 63.9
CSS0047262 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 2.0e-63 246.1 169 67.5
Gohir.D06G105600 Gossypium hirsutum HOM05D004383 ORTHO05D005050 2.7e-63 245.7 175 65.7
CiPaw.08G004800 Carya illinoinensis HOM05D004383 ORTHO05D005050 3.5e-63 245.4 170 67.1
Manes.03G007300 Manihot esculenta HOM05D004383 ORTHO05D005050 3.5e-63 245.4 175 66.9
Gohir.A05G061400 Gossypium hirsutum HOM05D004383 ORTHO05D005050 4.5e-63 245.0 169 66.3
Gorai.009G064600 Gossypium raimondii HOM05D004383 ORTHO05D005050 4.5e-63 245.0 169 66.3
Gorai.010G120200 Gossypium raimondii HOM05D004383 ORTHO05D005050 4.5e-63 245.0 169 66.3
TAR625G0171 Trochodendron aralioides HOM05D004383 ORTHO05D005050 4.5e-63 245.0 174 63.8
TAR625G1552 Trochodendron aralioides HOM05D004383 ORTHO05D005050 4.5e-63 245.0 174 63.8
CDE02G0236 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 5.9e-63 244.6 173 69.4
MD15G1042900 Malus domestica HOM05D004383 ORTHO05D005050 5.9e-63 244.6 175 66.3
RcHm_v2.0_Chr6g0299241 Rosa chinensis HOM05D004383 ORTHO05D005050 7.7e-63 244.2 175 66.3
PSO017G0706 Papaver somniferum HOM05D004383 ORTHO05D005050 1.0e-62 243.8 171 66.7
PSO170G1218 Papaver somniferum HOM05D004383 ORTHO05D005050 1.0e-62 243.8 171 66.7
Thecc.09G012700 Theobroma cacao HOM05D004383 ORTHO05D005050 1.7e-62 243.0 175 65.7
Aa31LG3G16320 Aethionema arabicum HOM05D004383 ORTHO05D005050 2.3e-62 242.7 167 67.1
CAN.G285.20 Capsicum annuum HOM05D004383 ORTHO05D005050 2.3e-62 242.7 166 67.5
COL.COLO4_18979 Corchorus olitorius HOM05D002641 ORTHO05D005050 2.3e-62 242.7 175 65.1
FvH4_3g24420 Fragaria vesca HOM05D004383 ORTHO05D005050 2.3e-62 242.7 170 65.9
Hma1.2p1_0355F.1_g133920 Hydrangea macrophylla HOM05D004383 ORTHO05D005050 2.3e-62 242.7 174 64.9
Lj7A737G42 Lonicera japonica HOM05D004383 ORTHO05D005050 2.3e-62 242.7 174 64.4
Oeu010290.1 Olea europaea HOM05D004383 ORTHO05D005050 2.3e-62 242.7 171 63.7
SGA_v2.0_scaffold4G02162 Striga asiatica HOM05D004383 ORTHO05D005050 2.3e-62 242.7 169 67.5
Cc00_g24580 Coffea canephora HOM05D004383 ORTHO05D005050 2.9e-62 242.3 169 66.9
Gohir.D05G063900 Gossypium hirsutum HOM05D004383 ORTHO05D005050 2.9e-62 242.3 180 63.9
Phvul.001G042400 Phaseolus vulgaris HOM05D004383 ORTHO05D005050 2.9e-62 242.3 182 64.8
Atru.chr7.2584 Acer truncatum HOM05D004383 ORTHO05D005050 3.8e-62 241.9 175 65.1
FAN21G1236 Fragaria x ananassa HOM05D004383 ORTHO05D005050 3.8e-62 241.9 170 65.9
SMO367G0045 Selaginella moellendorffii HOM05D004383 ORTHO05D005050 3.8e-62 241.9 168 69.6
arahy.Tifrunner.gnm1.ann1.W5C21C Arachis hypogaea HOM05D004383 ORTHO05D005050 5.0e-62 241.5 182 63.2
MELO3C016948.2 Cucumis melo HOM05D004383 ORTHO05D005050 5.0e-62 241.5 169 65.7
FvH4_6g27370 Fragaria vesca HOM05D004383 ORTHO05D005050 5.0e-62 241.5 169 68.0
FAN05G0819 Fragaria x ananassa HOM05D004383 ORTHO05D005050 5.0e-62 241.5 169 68.0
Sed0012000 Sechium edule HOM05D004383 ORTHO05D005050 5.0e-62 241.5 169 65.7
CSS0026414 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 6.6e-62 241.1 174 63.8
CARHR202520 Cardamine hirsuta HOM05D004383 ORTHO05D005050 6.6e-62 241.1 166 68.1
ECA238G1890 Erigeron canadensis HOM05D004383 ORTHO05D005050 6.6e-62 241.1 174 63.2
Migut.E01443 Erythranthe guttata HOM05D004383 ORTHO05D005050 6.6e-62 241.1 171 64.9
arahy.Tifrunner.gnm1.ann1.S5PPFL Arachis hypogaea HOM05D004383 ORTHO05D005050 1.5e-61 240.0 180 62.8
CDE05G2494 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 1.5e-61 240.0 173 67.6
FAN16G3501 Fragaria x ananassa HOM05D004383 ORTHO05D005050 1.5e-61 240.0 170 64.7
Nn1g03128 Nelumbo nucifera HOM05D004383 ORTHO05D005050 1.5e-61 240.0 168 66.7
Solyc08g006650.3 Solanum lycopersicum HOM05D004383 ORTHO05D005050 1.9e-61 239.6 166 66.3
VMungo0647G1739 Vigna mungo HOM05D004383 ORTHO05D005050 1.9e-61 239.6 182 64.3
Thhalv10014802m.g Eutrema salsugineum HOM05D004383 ORTHO05D005050 2.5e-61 239.2 166 67.5
Carub.0006s0928 Capsella rubella HOM05D004383 ORTHO05D005050 3.3e-61 238.8 166 67.5
CsaV3_4G036420 Cucumis sativus L. HOM05D004383 ORTHO05D005050 3.3e-61 238.8 168 65.5
Nn3g19885 Nelumbo nucifera HOM05D004383 ORTHO05D005050 3.3e-61 238.8 168 63.7
Glyma.14G103800 Glycine max HOM05D004383 ORTHO05D005050 4.3e-61 238.4 182 63.7
Glyma.17G222100 Glycine max HOM05D004383 ORTHO05D005050 4.3e-61 238.4 182 63.7
Nitab4.5_0000264g0060 Nicotiana tabacum HOM05D004383 ORTHO05D005050 4.3e-61 238.4 166 66.3
Rhsim07G0166500 Rhododendron simsii HOM05D004383 ORTHO05D005050 4.3e-61 238.4 196 59.2
TPR.G38877 Trifolium pratense HOM05D004383 ORTHO05D005050 4.3e-61 238.4 182 63.7
Actinidia14139 Actinidia chinensis HOM05D004383 ORTHO05D005050 5.6e-61 238.0 173 63.0
CiPaw.07G231900 Carya illinoinensis HOM05D004383 ORTHO05D005050 5.6e-61 238.0 170 65.9
Duzib168G1681 Durio zibethinus HOM05D004383 ORTHO05D005050 5.6e-61 238.0 177 63.8
THA.LOC104824960 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 5.6e-61 238.0 167 65.9
MSTRG.13961 Avicennia marina HOM05D004383 ORTHO05D005050 7.3e-61 237.7 171 63.7
C03p05470 Brassica napus HOM05D004383 ORTHO05D005050 7.3e-61 237.7 166 66.3
Sopen08g002600 Solanum pennellii HOM05D004383 ORTHO05D005050 7.3e-61 237.7 166 65.7
PGSC0003DMG400026285 Solanum tuberosum HOM05D004383 ORTHO05D005050 7.3e-61 237.7 166 65.7
BcaB01g05499 Brassica carinata HOM05D004383 ORTHO05D005050 9.5e-61 237.3 166 66.3
BcaB01g06278 Brassica carinata HOM05D004383 ORTHO05D005050 9.5e-61 237.3 166 66.3
BcaB05g21506 Brassica carinata HOM05D004383 ORTHO05D005050 9.5e-61 237.3 166 65.7
AUR62032433 Chenopodium quinoa HOM05D004383 ORTHO05D005050 9.5e-61 237.3 170 64.1
AUR62024788 Chenopodium quinoa HOM05D004383 ORTHO05D005050 1.2e-60 236.9 170 64.1
HanXRQChr12g0370101 Helianthus annuus HOM05D004383 ORTHO05D005050 1.2e-60 236.9 170 64.1
Sp6g32680 Schrenkiella parvula HOM05D004383 ORTHO05D005050 1.2e-60 236.9 166 66.3
SGA_v2.0_scaffold169G38599 Striga asiatica HOM05D004383 ORTHO05D005050 1.2e-60 236.9 169 64.5
AL6G21360 Arabidopsis lyrata HOM05D004383 ORTHO05D005050 1.6e-60 236.5 166 66.9
AT5G10780 Arabidopsis thaliana HOM05D004383 ORTHO05D005050 1.6e-60 236.5 166 66.9
HanXRQChr07g0201211 Helianthus annuus HOM05D004383 ORTHO05D005050 1.6e-60 236.5 180 63.3
EL10Ac2g02480 Beta vulgaris HOM05D004383 ORTHO05D005050 2.1e-60 236.1 167 65.3
ClCG05G016150 Citrullus lanatus HOM05D004383 ORTHO05D005050 2.1e-60 236.1 169 64.5
ECA233G1452 Erigeron canadensis HOM05D004383 ORTHO05D005050 2.1e-60 236.1 170 63.5
Peaxi162Scf00045g01943 Petunia axillaris HOM05D004383 ORTHO05D005050 2.1e-60 236.1 166 65.1
Psat6g025120 Pisum sativum HOM05D004383 ORTHO05D005050 2.1e-60 236.1 178 63.5
TWI32G1179 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 2.1e-60 236.1 180 63.3
Sed0009310 Sechium edule HOM05D004383 ORTHO05D005050 6.1e-60 234.6 169 65.1
Lj6g0009294 Lotus japonicus HOM05D004383 ORTHO05D005050 8.0e-60 234.2 175 62.9
FAN14G2933 Fragaria x ananassa HOM05D004383 ORTHO05D005050 1.0e-59 233.8 169 66.9
THA.LOC104799028 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 1.0e-59 233.8 167 64.7
BcaC03g13332 Brassica carinata HOM05D004383 ORTHO05D005050 1.4e-59 233.4 167 65.9
A02p00660 Brassica napus HOM05D004383 ORTHO05D005050 1.4e-59 233.4 167 65.9
C02p04660 Brassica napus HOM05D004383 ORTHO05D005050 1.4e-59 233.4 167 65.9
Lsat_1_v5_gn_8_16540 Lactuca sativa HOM05D004383 ORTHO05D005050 1.4e-59 233.4 170 63.5
MBI14_g31383_MAGBIO Magnolia biondii HOM05D004383 ORTHO05D005050 1.4e-59 233.4 175 65.1
Medtr1g013660 Medicago truncatula HOM05D004383 ORTHO05D005050 1.4e-59 233.4 178 62.9
A03p04760 Brassica napus HOM05D004383 ORTHO05D005050 1.8e-59 233.0 167 65.9
BraA02t05050Z Brassica rapa HOM05D004383 ORTHO05D005050 4.0e-59 231.9 167 65.3
CSS0025027 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 5.2e-59 231.5 165 65.5
Ah.12g060630 Amaranthus hybridus HOM05D004383 ORTHO05D005050 6.8e-59 231.1 166 64.5
Os03g0360500 Oryza sativa ssp. japonica HOM05D004383 ORTHO05D005050 6.8e-59 231.1 175 62.9
Sabra06G0208900 Salix brachista HOM05D004383 ORTHO05D005050 1.2e-58 230.3 156 68.6
TWI34G1410 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 1.2e-58 230.3 180 62.2
BraA03t09816Z Brassica rapa HOM05D004383 ORTHO05D005050 1.5e-58 229.9 167 65.3
Lalb_Chr24g0401921 Lupinus albus HOM05D004383 ORTHO05D005050 2.6e-58 229.2 173 61.8
Zm00001eb394360 Zea mays HOM05D004383 ORTHO05D005050 2.6e-58 229.2 174 62.6
Ca_13075_v3 Cicer arietinum L. HOM05D004383 ORTHO05D005050 4.4e-58 228.4 178 61.2
DCAR_003054 Daucus carota HOM05D004383 ORTHO05D005050 5.7e-58 228.0 161 66.5
Nitab4.5_0001362g0040 Nicotiana tabacum HOM05D004383 ORTHO05D005050 9.8e-58 227.3 156 67.3
Sabra18G0020200 Salix brachista HOM05D004383 ORTHO05D005050 9.8e-58 227.3 156 67.3
BolC3t13057H Brassica oleracea HOM05D004383 ORTHO05D005050 1.3e-57 226.9 172 62.8
QL02p018464 Quercus lobata HOM05D004383 ORTHO05D005050 1.3e-57 226.9 157 66.9
Ciclev10009603m.g Citrus clementina HOM05D004383 ORTHO05D005050 2.2e-57 226.1 168 64.9
Migut.A00383 Erythranthe guttata HOM05D004383 ORTHO05D005050 2.2e-57 226.1 169 62.1
Cpa.g.sc148.37 Carica papaya HOM05D004383 ORTHO05D005050 2.9e-57 225.7 178 62.4
Oeu021906.1 Olea europaea HOM05D004383 ORTHO05D005050 1.1e-56 223.8 156 65.4
FAN02G2967 Fragaria x ananassa HOM05D004383 ORTHO05D005050 1.8e-56 223.0 156 68.6
MD08G1052600 Malus domestica HOM05D004383 ORTHO05D005050 1.8e-56 223.0 173 63.6
BolC2t06425H Brassica oleracea HOM05D004383 ORTHO05D003478 4.1e-56 221.9 158 65.8
vmacro05117 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 5.4e-56 221.5 161 62.7
SalBow8G1520 Salvia bowleyana HOM05D004383 ORTHO05D005050 9.2e-56 220.7 157 65.6
Haze_21384 Corylus avellana HOM05D004383 ORTHO05D005050 1.6e-55 219.9 191 57.1
unitig_32.g11121 Utricularia gibba HOM05D004383 ORTHO05D005050 1.0e-54 217.2 157 65.0
CBR_g29297 Chara braunii HOM05D004383 ORTHO05D005050 7.0e-48 194.5 179 53.6
vmacro11269 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 3.5e-47 192.2 253 41.9
Sc23g0006160 Simmondsia chinensis HOM05D004383 ORTHO05D005050 4.6e-47 191.8 137 64.2
Dinv10290 Davidia involucrata HOM05D004383 ORTHO05D005050 1.7e-46 189.9 145 60.7
Actinidia10531 Actinidia chinensis HOM05D004383 ORTHO05D005050 1.9e-45 186.4 174 55.2
BcaNung06638 Brassica carinata HOM05D004383 ORTHO05D005050 3.7e-41 172.2 134 62.7
PRCOL_00000905 Prasinoderma coloniale HOM05D004383 ORTHO05D005050 3.8e-33 145.6 171 45.0
Aqoxy7G03322 Aquilegia oxysepala HOM05D004383 ORTHO05D005050 3.2e-32 142.5 155 49.0
HPP92_021971 Vanilla planifolia HOM05D004383 ORTHO05D005050 7.8e-31 137.9 79 82.3
HPP92_021944 Vanilla planifolia HOM05D004383 ORTHO05D005050 5.6e-29 131.7 111 60.4
MCO09G762 Micromonas commoda HOM05D004383 ORTHO05D005050 1.2e-28 130.6 179 40.2
Dinv01903 Davidia involucrata HOM05D004383 ORTHO05D005050 1.7e-25 120.2 95 58.9
TAR383G0062 Trochodendron aralioides HOM05D004383 ORTHO05D005050 2.4e-24 116.3 91 59.3
TAR383G0705 Trochodendron aralioides HOM05D004383 ORTHO05D005050 2.3e-22 109.8 70 70.0
Medtr8g027900 Medicago truncatula HOM05D000337 ORTHO05D000297 2.4e-19 99.8 52 88.5
Cfa024789 Carpinus fangiana HOM05D004383 ORTHO05D005050 3.1e-19 99.4 165 35.2
CSS0012906 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 4.0e-19 99.0 54 83.3
DCAR_031730 Daucus carota HOM05D004383 ORTHO05D005050 5.8e-18 95.1 98 50.0
CSS0013447 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 2.7e-15 86.3 56 69.6
Cre07.g351700 Chlamydomonas reinhardtii HOM05D004383 ORTHO05D005050 5.1e-14 82.0 143 33.6
DCAR_030622 Daucus carota HOM05D001936 ORTHO05D005050 8.7e-14 81.3 60 61.7
arahy.Tifrunner.gnm1.ann1.76P32W Arachis hypogaea HOM05D004383 ORTHO05D005050 6.2e-12 75.1 75 45.3
arahy.Tifrunner.gnm1.ann1.90HH72 Arachis hypogaea HOM05D004383 ORTHO05D005050 6.2e-12 75.1 75 45.3
Lalb_Chr15g0080471 Lupinus albus HOM05D004383 ORTHO05D005050 2.4e-11 73.2 89 43.8
arahy.Tifrunner.gnm1.ann1.54XXT5 Arachis hypogaea HOM05D004383 ORTHO05D005050 5.8e-10 68.6 37 83.8
Lalb_Chr15g0078021 Lupinus albus HOM05D004383 ORTHO05D005050 1.3e-09 67.4 87 42.5
Lalb_Chr10g0093521 Lupinus albus HOM05D004383 ORTHO05D005050 3.8e-09 65.9 38 81.6
MD10G1133700 Malus domestica HOM05D004383 ORTHO05D005050 1.2e-07 60.8 71 46.5
Lalb_Chr01g0013281 Lupinus albus HOM05D004383 ORTHO05D005050 3.5e-07 59.3 47 59.6
Atru.chr7.2578 Acer truncatum HOM05D004610 ORTHO05D001148 7.9e-07 58.2 50 56.0
Oeu048647.1 Olea europaea HOM05D004383 ORTHO05D005050 7.9e-07 58.2 50 50.0
Atru.chr7.2585 Acer truncatum HOM05D004383 ORTHO05D005050 1.0e-06 57.8 44 56.8
MD10G1176800 Malus domestica HOM05D004383 ORTHO05D005050 1.0e-06 57.8 42 64.3
RcHm_v2.0_Chr3g0494951 Rosa chinensis HOM05D004383 ORTHO05D005050 3.9e-06 55.8 47 57.4


User provided reference genes

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