Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0038s0092 Marchantia polymorpha HOM05D016812 ORTHO05D010187 1.0e-103 380.2 207 100.0
Pp3c10_8870 Physcomitrium patens HOM05D016812 ORTHO05D024947 8.0e-32 141.4 199 41.2
Pp3c19_10180 Physcomitrium patens HOM05D016812 ORTHO05D024947 4.0e-31 139.0 207 39.1
Pp3c22_19630 Physcomitrium patens HOM05D016812 ORTHO05D024947 3.4e-30 136.0 196 40.8
SMO358G0701 Selaginella moellendorffii HOM05D016812 ORTHO05D010187 3.3e-25 119.4 189 38.6
CBR_g85947 Chara braunii HOM05D016812 ORTHO05D024947 1.3e-21 107.5 189 37.6
CBR_g8990 Chara braunii HOM05D016812 ORTHO05D024947 4.9e-21 105.5 198 34.8
Prupe.7G199300 Prunus persica HOM05D008087 ORTHO05D010187 2.4e-12 76.6 193 30.1
MD15G1217200 Malus domestica HOM05D008087 ORTHO05D010187 7.8e-11 71.6 193 28.5
Mapoly0001s0229 Marchantia polymorpha HOM05D016812 ORTHO05D257186 1.3e-10 70.9 171 30.4
Hma1.2p1_0179F.1_g079550 Hydrangea macrophylla HOM05D008087 ORTHO05D010187 1.7e-10 70.5 187 29.4
QL11p000704 Quercus lobata HOM05D008087 ORTHO05D010187 2.3e-10 70.1 187 31.0
MSTRG.19463 Avicennia marina HOM05D008087 ORTHO05D010187 5.1e-10 68.9 189 29.1
CSS0037579 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 6.6e-10 68.6 191 29.8
Nitab4.5_0002966g0020 Nicotiana tabacum HOM05D008087 ORTHO05D010187 8.7e-10 68.2 188 30.9
DCAR_024749 Daucus carota HOM05D008087 ORTHO05D010187 1.1e-09 67.8 186 31.7
TWI34G0776 Tripterygium wilfordii HOM05D008087 ORTHO05D010187 1.1e-09 67.8 186 28.5
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 1.1e-09 67.8 187 29.9
CSS0002060 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 1.9e-09 67.0 191 29.3
Migut.J00928 Erythranthe guttata HOM05D008087 ORTHO05D010187 1.9e-09 67.0 185 29.2
Phvul.003G131000 Phaseolus vulgaris HOM05D008087 ORTHO05D010187 1.9e-09 67.0 187 29.4
Cc06_g12130 Coffea canephora HOM05D008087 ORTHO05D010187 3.3e-09 66.2 188 28.7
SEGI_14451 Sequoiadendron giganteum HOM05D003033 ORTHO05D003475 7.3e-09 65.1 141 28.4
Glyma.13G110250 Glycine max HOM05D008087 ORTHO05D010187 9.6e-09 64.7 187 29.4
TAR383G0588 Trochodendron aralioides HOM05D008087 ORTHO05D010187 9.6e-09 64.7 188 28.2
Lj4P912T21 Lonicera japonica HOM05D008087 ORTHO05D010187 1.2e-08 64.3 184 28.8
Aqoxy1G01322 Aquilegia oxysepala HOM05D008087 ORTHO05D010187 1.6e-08 63.9 182 28.0
CiPaw.03G206800 Carya illinoinensis HOM05D008087 ORTHO05D010187 1.6e-08 63.9 199 29.6
VMungo1215G2436 Vigna mungo HOM05D008087 ORTHO05D010187 2.1e-08 63.5 186 27.4
Solyc07g041770.1 Solanum lycopersicum HOM05D008087 ORTHO05D010187 6.2e-08 62.0 187 28.9
SalBow6G2426 Salvia bowleyana HOM05D008087 ORTHO05D010187 1.8e-07 60.5 206 27.7
Sopen07g021260 Solanum pennellii HOM05D008087 ORTHO05D010187 1.8e-07 60.5 187 28.3
PGSC0003DMG400013001 Solanum tuberosum HOM05D008087 ORTHO05D010187 1.8e-07 60.5 191 28.3
CSS0034066 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 2.4e-07 60.1 162 30.9
Glyma.17G049450 Glycine max HOM05D008087 ORTHO05D010187 2.4e-07 60.1 189 28.6
PGR044G2582 Punica granatum HOM05D008087 ORTHO05D010187 2.4e-07 60.1 190 27.9
AL5G20930 Arabidopsis lyrata HOM05D008087 ORTHO05D010187 9.0e-07 58.2 153 28.1
Psat4g017680 Pisum sativum HOM05D008087 ORTHO05D010187 1.2e-06 57.8 186 27.4
Ah.09g231600 Amaranthus hybridus HOM05D008087 ORTHO05D010187 3.4e-06 56.2 171 25.7


User provided reference genes

Program Settings