Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 8.0e-55 216.9 110 100.0
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 7.5e-29 130.6 106 60.4
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 9.9e-29 130.2 106 60.4
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 1.3e-28 129.8 107 59.8
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.3e-28 129.8 107 59.8
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 3.7e-28 128.3 107 58.9
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 3.7e-28 128.3 106 59.4
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 3.7e-28 128.3 107 58.9
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 4.9e-28 127.9 104 59.6
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 1.9e-27 125.9 104 58.7
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 3.2e-27 125.2 104 60.6
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 4.1e-27 124.8 102 57.8
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 4.1e-27 124.8 106 57.5
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 5.4e-27 124.4 106 58.5
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 5.4e-27 124.4 105 56.2
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 7.1e-27 124.0 106 57.5
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 9.2e-27 123.6 108 54.6
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 2.1e-26 122.5 101 58.4
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 2.1e-26 122.5 106 57.5
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 2.7e-26 122.1 104 56.7
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 3.5e-26 121.7 106 54.7
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 3.5e-26 121.7 103 57.3
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 4.6e-26 121.3 106 56.6
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 6.0e-26 120.9 104 55.8
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 7.8e-26 120.6 105 53.3
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 7.8e-26 120.6 104 54.8
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 1.0e-25 120.2 105 54.3
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.0e-25 120.2 104 54.8
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.0e-25 120.2 108 51.9
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 1.3e-25 119.8 106 53.8
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.7e-25 119.4 108 52.8
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 1.7e-25 119.4 104 57.7
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 1.7e-25 119.4 99 58.6
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.3e-25 119.0 105 52.4
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 2.3e-25 119.0 101 55.4
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 2.3e-25 119.0 103 56.3
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 2.3e-25 119.0 101 55.4
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 3.0e-25 118.6 107 53.3
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 3.0e-25 118.6 106 52.8
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 3.0e-25 118.6 106 52.8
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 3.9e-25 118.2 104 53.8
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 3.9e-25 118.2 102 52.9
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 5.1e-25 117.9 104 55.8
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 5.1e-25 117.9 105 52.4
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 5.1e-25 117.9 110 50.9
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 6.6e-25 117.5 109 53.2
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 6.6e-25 117.5 109 53.2
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 6.6e-25 117.5 107 51.4
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 6.6e-25 117.5 106 51.9
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 8.6e-25 117.1 110 50.9
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 1.1e-24 116.7 105 53.3
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 1.1e-24 116.7 105 52.4
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 1.1e-24 116.7 101 53.5
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 1.1e-24 116.7 102 52.9
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 1.1e-24 116.7 106 50.9
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.5e-24 116.3 103 52.4
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.5e-24 116.3 106 52.8
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 1.5e-24 116.3 104 53.8
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.9e-24 115.9 103 51.5
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 2.5e-24 115.5 101 54.5
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 3.3e-24 115.2 103 53.4
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 3.3e-24 115.2 104 52.9
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 3.3e-24 115.2 101 53.5
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 3.3e-24 115.2 106 51.9
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 4.3e-24 114.8 98 56.1
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 4.3e-24 114.8 101 53.5
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 4.3e-24 114.8 106 52.8
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 5.6e-24 114.4 106 53.8
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 7.3e-24 114.0 104 52.9
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 7.3e-24 114.0 106 53.8
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 9.5e-24 113.6 104 52.9
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 9.5e-24 113.6 103 52.4
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 9.5e-24 113.6 103 52.4
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 9.5e-24 113.6 101 52.5
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.2e-23 113.2 98 55.1
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 1.2e-23 113.2 98 55.1
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.2e-23 113.2 98 55.1
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 1.2e-23 113.2 98 55.1
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 2.1e-23 112.5 103 51.5
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.1e-23 112.5 101 52.5
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 2.1e-23 112.5 101 52.5
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 2.8e-23 112.1 103 51.5
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 4.7e-23 111.3 101 52.5
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 4.7e-23 111.3 103 51.5
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.8e-22 109.4 102 50.0
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 3.1e-22 108.6 100 52.0
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 3.1e-22 108.6 104 48.1
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 4.0e-22 108.2 104 50.0
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 4.0e-22 108.2 103 49.5
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 4.0e-22 108.2 133 43.6
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 4.0e-22 108.2 103 48.5
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 5.2e-22 107.8 120 46.7
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 8.9e-22 107.1 104 52.9
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 2.6e-21 105.5 118 48.3
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 5.8e-21 104.4 145 41.4
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 9.9e-21 103.6 136 41.2
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 9.9e-21 103.6 132 43.9
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 2.2e-20 102.4 99 51.5
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 2.2e-20 102.4 129 43.4
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 2.9e-20 102.1 94 54.3
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 4.9e-20 101.3 106 47.2
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 6.4e-20 100.9 104 45.2
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.1e-19 100.1 107 46.7
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 1.6e-18 96.3 85 55.3
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 4.6e-18 94.7 180 35.0
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.7e-17 92.8 83 54.2
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 2.5e-16 89.0 102 41.2
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 3.3e-16 88.6 82 52.4
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 5.6e-16 87.8 80 53.8
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 7.3e-16 87.4 98 44.9
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 1.2e-15 86.7 68 52.9
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 2.1e-15 85.9 68 52.9
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 4.0e-14 81.6 85 49.4
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.2e-12 75.9 90 42.2
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.1e-11 73.6 68 52.9
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 3.2e-11 72.0 56 58.9
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.2e-10 70.1 64 53.1
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.6e-10 69.7 72 45.8
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 2.1e-10 69.3 64 51.6
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.1e-08 63.5 48 62.5
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.9e-08 62.8 66 45.5
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.4e-06 56.6 35 68.6


User provided reference genes

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