Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 2.9e-90 336.3 347 100.0
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 3.9e-15 86.7 105 41.9
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 9.7e-14 82.0 117 41.9
Dinv22404 Davidia involucrata HOM05D007363 ORTHO05D009018 3.7e-13 80.1 111 42.3
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 4.8e-13 79.7 112 44.6
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 4.8e-13 79.7 112 44.6
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 4.8e-13 79.7 104 39.4
Lsat_1_v5_gn_9_8480 Lactuca sativa HOM05D007363 ORTHO05D009018 8.2e-13 79.0 111 41.4
CiPaw.04G186800 Carya illinoinensis HOM05D007363 ORTHO05D009018 1.1e-12 78.6 107 45.8
QL09p038775 Quercus lobata HOM05D007363 ORTHO05D009018 1.1e-12 78.6 108 43.5
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 1.8e-12 77.8 111 40.5
Actinidia25792 Actinidia chinensis HOM05D007363 ORTHO05D009018 2.4e-12 77.4 111 40.5
Cfa002427 Carpinus fangiana HOM05D007363 ORTHO05D009018 3.1e-12 77.0 109 40.4
MD05G1197000 Malus domestica HOM05D007363 ORTHO05D009018 3.1e-12 77.0 107 42.1
Prupe.8G223500 Prunus persica HOM05D007363 ORTHO05D009018 3.1e-12 77.0 107 43.0
Lj1C66G14 Lonicera japonica HOM05D007363 ORTHO05D009018 4.1e-12 76.6 111 42.3
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 5.3e-12 76.3 110 40.0
CsaV3_7G027320 Cucumis sativus L. HOM05D007363 ORTHO05D009018 7.0e-12 75.9 113 39.8
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 7.0e-12 75.9 104 41.3
CSS0036840 Camellia sinensis var. sinensis HOM05D007363 ORTHO05D009018 9.1e-12 75.5 108 42.6
ClCG09G007810 Citrullus lanatus HOM05D007363 ORTHO05D009018 9.1e-12 75.5 112 39.3
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.2e-11 75.1 117 35.9
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 1.2e-11 75.1 113 41.6
GSVIVG01028336001 Vitis vinifera HOM05D007363 ORTHO05D009018 1.2e-11 75.1 111 42.3
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 2.0e-11 74.3 107 39.3
HanXRQChr10g0280941 Helianthus annuus HOM05D007363 ORTHO05D009018 2.0e-11 74.3 107 41.1
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 2.0e-11 74.3 110 40.0
Potri.005G224600 Populus trichocarpa HOM05D007363 ORTHO05D009018 2.0e-11 74.3 110 40.9
BcaB01g04373 Brassica carinata HOM05D007363 ORTHO05D009018 3.5e-11 73.6 108 42.6
A03p13820 Brassica napus HOM05D007363 ORTHO05D009018 3.5e-11 73.6 108 41.7
BraA03t10685Z Brassica rapa HOM05D007363 ORTHO05D009018 3.5e-11 73.6 108 41.7
Pp3c3_2630 Physcomitrium patens HOM05D021038 ORTHO05D009018 5.9e-11 72.8 110 39.1
Zm00001eb077670 Zea mays HOM05D007363 ORTHO05D009018 5.9e-11 72.8 109 38.5
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 7.7e-11 72.4 108 39.8
FAN20G0360 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.0e-10 72.0 107 40.2
Nn3g19660 Nelumbo nucifera HOM05D007363 ORTHO05D009018 1.0e-10 72.0 108 40.7
Oeu026230.1 Olea europaea HOM05D007363 ORTHO05D009018 1.0e-10 72.0 108 40.7
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 1.0e-10 72.0 108 41.7
BcaB08g34913 Brassica carinata HOM05D007363 ORTHO05D009018 1.3e-10 71.6 108 41.7
BolC3t14048H Brassica oleracea HOM05D007363 ORTHO05D009018 1.3e-10 71.6 108 41.7
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.3e-10 71.6 106 38.7
TWI18G0555 Tripterygium wilfordii HOM05D007363 ORTHO05D009018 1.3e-10 71.6 107 39.3
BcaC01g06392 Brassica carinata HOM05D007363 ORTHO05D009018 1.7e-10 71.2 108 41.7
C03p16260 Brassica napus HOM05D007363 ORTHO05D009018 1.7e-10 71.2 108 41.7
FvH4_2g21450 Fragaria vesca HOM05D007363 ORTHO05D009018 2.2e-10 70.9 107 40.2
FAN24G0389 Fragaria x ananassa HOM05D007363 ORTHO05D009018 2.2e-10 70.9 107 40.2
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 2.9e-10 70.5 110 39.1
AL3G53530 Arabidopsis lyrata HOM05D007363 ORTHO05D009018 3.8e-10 70.1 108 41.7
PSO017G1673 Papaver somniferum HOM05D007363 ORTHO05D009018 3.8e-10 70.1 108 38.9
Aqoxy5G00227 Aquilegia oxysepala HOM05D007363 ORTHO05D009018 5.0e-10 69.7 107 40.2
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 5.0e-10 69.7 109 38.5
ECA247G1846 Erigeron canadensis HOM05D007363 ORTHO05D009018 6.5e-10 69.3 108 38.9
Sabra05G0173300 Salix brachista HOM05D007363 ORTHO05D009018 6.5e-10 69.3 107 39.3
Ciclev10024115m.g Citrus clementina HOM05D007363 ORTHO05D009018 8.5e-10 68.9 110 38.2
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 8.5e-10 68.9 108 38.9
TAR365G0665 Trochodendron aralioides HOM05D007363 ORTHO05D009018 8.5e-10 68.9 107 39.3
ATR0736G122 Amborella trichopoda HOM05D007363 ORTHO05D009018 1.5e-09 68.2 108 40.7
AUR62024717 Chenopodium quinoa HOM05D007363 ORTHO05D009018 1.5e-09 68.2 111 36.0
MBI10_g08049_MAGBIO Magnolia biondii HOM05D007363 ORTHO05D009018 2.5e-09 67.4 103 40.8
Atru.chr5.1691 Acer truncatum HOM05D007363 ORTHO05D009018 4.2e-09 66.6 110 38.2
Ah.02g111990 Amaranthus hybridus HOM05D007363 ORTHO05D009018 4.2e-09 66.6 107 38.3
PGR042G3583 Punica granatum HOM05D007363 ORTHO05D009018 9.4e-09 65.5 109 40.4
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 9.4e-09 65.5 112 36.6
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 1.2e-08 65.1 107 35.5
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.7e-08 63.9 106 40.6
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.4e-07 61.6 103 39.8
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 1.8e-07 61.2 104 39.4
unitig_0.g703 Utricularia gibba HOM05D007363 ORTHO05D009018 1.8e-07 61.2 109 34.9
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.3e-07 60.8 106 39.6
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 3.0e-07 60.5 86 43.0
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 3.0e-07 60.5 86 43.0
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 3.0e-07 60.5 87 43.7
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 4.0e-07 60.1 105 37.1
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 4.0e-07 60.1 106 35.8
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 4.0e-07 60.1 103 38.8
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 5.2e-07 59.7 106 40.6
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 6.7e-07 59.3 113 31.9
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 6.7e-07 59.3 115 38.3
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 6.7e-07 59.3 103 38.8
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 6.7e-07 59.3 106 38.7
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 8.8e-07 58.9 103 38.8
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 1.1e-06 58.5 107 38.3
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 1.1e-06 58.5 107 39.3
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 1.1e-06 58.5 107 38.3
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.1e-06 58.5 87 42.5
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.1e-06 58.5 106 34.9
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 1.5e-06 58.2 106 39.6
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.5e-06 58.2 106 36.8
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 2.0e-06 57.8 103 36.9
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.0e-06 57.8 106 38.7
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 2.6e-06 57.4 88 42.0
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 2.6e-06 57.4 87 41.4
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 3.3e-06 57.0 86 41.9
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 3.3e-06 57.0 106 38.7
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 4.4e-06 56.6 106 34.9
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 5.7e-06 56.2 106 36.8
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 5.7e-06 56.2 87 40.2
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 5.7e-06 56.2 109 35.8
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 7.5e-06 55.8 109 36.7
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 7.5e-06 55.8 86 41.9
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 7.5e-06 55.8 86 40.7
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 7.5e-06 55.8 86 40.7
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 9.7e-06 55.5 106 36.8
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 9.7e-06 55.5 106 35.8


User provided reference genes

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