Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 1.6e-250 869.0 461 100.0
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 1.9e-102 377.1 445 45.2
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 4.6e-96 355.9 446 46.4
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 1.7e-74 284.3 355 38.6
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 2.9e-74 283.5 355 38.6
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 3.8e-74 283.1 367 38.4
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 5.5e-73 279.3 352 39.2
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 7.2e-73 278.9 354 38.4
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.6e-72 277.7 367 37.1
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 2.7e-72 276.9 347 38.0
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 4.7e-72 276.2 347 38.0
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 4.7e-72 276.2 364 37.9
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 7.9e-72 275.4 347 38.6
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 1.0e-71 275.0 347 37.8
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.8e-71 274.2 347 38.3
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 1.8e-71 274.2 366 36.6
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 2.3e-71 273.9 347 38.3
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 2.3e-71 273.9 352 37.2
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.3e-71 273.9 352 37.2
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 3.0e-71 273.5 367 36.2
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 3.0e-71 273.5 367 35.7
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 3.9e-71 273.1 367 37.3
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 5.2e-71 272.7 347 38.3
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 5.2e-71 272.7 347 38.0
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 5.2e-71 272.7 369 36.6
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 6.7e-71 272.3 352 36.9
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 6.7e-71 272.3 367 35.7
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 8.8e-71 271.9 347 38.3
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 1.1e-70 271.6 347 38.3
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 1.1e-70 271.6 347 38.0
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.1e-70 271.6 347 38.3
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 1.5e-70 271.2 347 37.5
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 1.5e-70 271.2 372 36.0
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.5e-70 271.2 347 36.6
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.5e-70 271.2 367 36.8
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 2.0e-70 270.8 352 36.6
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 2.6e-70 270.4 352 35.8
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 2.6e-70 270.4 347 38.0
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 2.6e-70 270.4 367 37.1
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 3.3e-70 270.0 352 35.8
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 3.3e-70 270.0 365 35.9
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 4.4e-70 269.6 367 36.5
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 4.4e-70 269.6 365 35.9
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 5.7e-70 269.2 368 36.1
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 5.7e-70 269.2 361 36.6
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 5.7e-70 269.2 367 36.5
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 9.7e-70 268.5 342 37.1
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 9.7e-70 268.5 366 35.2
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 9.7e-70 268.5 368 37.0
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 1.3e-69 268.1 347 37.8
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 1.3e-69 268.1 347 36.6
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 2.2e-69 267.3 347 37.5
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 2.2e-69 267.3 367 36.5
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 2.2e-69 267.3 347 36.3
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 2.2e-69 267.3 369 36.3
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 2.8e-69 266.9 352 36.9
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 3.7e-69 266.5 367 36.2
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 3.7e-69 266.5 347 36.9
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 4.8e-69 266.2 370 35.1
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 4.8e-69 266.2 367 36.0
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 4.8e-69 266.2 347 36.6
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 4.8e-69 266.2 352 37.5
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 8.2e-69 265.4 349 35.8
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 8.2e-69 265.4 327 40.1
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 8.2e-69 265.4 367 36.2
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.1e-68 265.0 347 35.7
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 1.1e-68 265.0 367 36.0
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.4e-68 264.6 333 38.1
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 1.4e-68 264.6 352 35.5
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 1.4e-68 264.6 327 39.1
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 3.1e-68 263.5 370 35.4
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 4.1e-68 263.1 361 36.3
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 4.1e-68 263.1 357 38.7
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 7.0e-68 262.3 391 34.8
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 5.9e-67 259.2 347 36.9
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.2e-66 257.3 347 34.9
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 5.0e-66 256.1 347 36.6
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 3.2e-65 253.4 354 35.6
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 9.4e-65 251.9 350 37.1
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 2.1e-64 250.8 394 33.0
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 1.0e-63 248.4 362 35.4
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 3.0e-63 246.9 367 33.8
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 5.2e-63 246.1 334 37.7
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 6.7e-63 245.7 367 33.8
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.8e-63 245.4 365 34.5
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.5e-62 244.6 361 34.6
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 3.3e-62 243.4 351 34.2
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 3.7e-61 240.0 391 33.2
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 2.7e-59 233.8 338 35.2
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.5e-57 227.3 276 38.4
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 4.7e-56 223.0 363 34.2
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 8.0e-56 222.2 283 37.5
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 4.4e-54 216.5 286 35.3
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 7.5e-54 215.7 352 32.7
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.7e-53 214.5 326 33.4
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 8.3e-53 212.2 303 35.3
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.9e-50 203.8 419 29.1
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 1.0e-47 195.3 334 32.3
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 5.6e-33 146.4 168 37.5
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 1.6e-32 144.8 199 35.7
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 2.3e-31 141.0 176 37.5
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 6.8e-31 139.4 197 36.0
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 2.5e-17 94.4 107 39.3
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 2.5e-17 94.4 107 39.3
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 3.3e-17 94.0 106 39.6
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 3.3e-17 94.0 106 37.7
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 3.1e-15 87.4 105 38.1
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 6.0e-11 73.2 82 36.6
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 1.6e-08 65.1 59 47.5


User provided reference genes

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