Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 3.3e-139 498.4 263 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 3.0e-68 262.7 222 65.3
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 4.3e-62 242.3 158 75.3
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 4.3e-62 242.3 203 62.6
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 1.2e-61 240.7 143 81.1
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 1.2e-61 240.7 183 67.8
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 1.6e-61 240.4 159 74.2
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.6e-61 240.4 147 76.2
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 1.6e-61 240.4 225 59.6
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 1.6e-61 240.4 226 59.7
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 2.1e-61 240.0 145 80.7
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 2.8e-61 239.6 168 70.8
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 4.7e-61 238.8 142 79.6
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 8.0e-61 238.0 156 76.3
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 8.0e-61 238.0 183 65.6
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 1.0e-60 237.7 189 65.6
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 1.0e-60 237.7 166 71.1
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 1.4e-60 237.3 153 74.5
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 2.3e-60 236.5 178 66.9
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 2.3e-60 236.5 189 65.1
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 2.3e-60 236.5 148 75.0
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.3e-60 236.5 166 70.5
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 3.0e-60 236.1 199 61.8
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 3.0e-60 236.1 185 67.0
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 4.0e-60 235.7 146 78.8
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 5.2e-60 235.3 186 67.7
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 6.8e-60 235.0 199 61.8
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 8.9e-60 234.6 179 66.5
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 8.9e-60 234.6 168 68.5
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 1.2e-59 234.2 177 69.5
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 1.2e-59 234.2 183 65.6
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.2e-59 234.2 144 78.5
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 1.5e-59 233.8 162 71.0
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 1.5e-59 233.8 162 71.0
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 1.5e-59 233.8 138 78.3
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 2.0e-59 233.4 223 56.5
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 2.6e-59 233.0 141 76.6
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 2.6e-59 233.0 194 62.9
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 2.6e-59 233.0 189 65.1
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 3.4e-59 232.6 185 65.4
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 3.4e-59 232.6 192 61.5
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 3.4e-59 232.6 198 63.1
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 4.4e-59 232.3 138 79.0
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 4.4e-59 232.3 187 64.7
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 5.7e-59 231.9 174 68.4
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 5.7e-59 231.9 151 74.2
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 5.7e-59 231.9 171 69.0
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 5.7e-59 231.9 179 69.8
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 5.7e-59 231.9 185 65.4
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 7.5e-59 231.5 149 75.8
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 7.5e-59 231.5 192 63.5
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 9.8e-59 231.1 216 58.8
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 9.8e-59 231.1 187 62.6
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.7e-58 230.3 195 63.1
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 2.2e-58 229.9 174 66.7
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 2.2e-58 229.9 138 79.7
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.2e-58 229.9 138 79.7
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 2.9e-58 229.6 170 68.2
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.9e-58 229.6 148 74.3
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 2.9e-58 229.6 138 78.3
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 2.9e-58 229.6 163 69.3
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 3.7e-58 229.2 162 71.0
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 3.7e-58 229.2 162 71.0
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 3.7e-58 229.2 175 66.9
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 3.7e-58 229.2 189 64.0
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 4.9e-58 228.8 201 61.7
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 6.4e-58 228.4 159 71.1
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.1e-57 227.6 148 74.3
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 1.1e-57 227.6 168 68.5
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 1.1e-57 227.6 178 67.4
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 1.4e-57 227.3 180 65.0
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.8e-57 226.9 132 80.3
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 1.8e-57 226.9 192 62.0
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.8e-57 226.9 199 59.8
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 1.8e-57 226.9 184 62.5
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 4.1e-57 225.7 128 82.8
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 4.1e-57 225.7 156 73.1
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 7.0e-57 224.9 173 65.9
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 1.2e-56 224.2 134 77.6
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 1.6e-56 223.8 216 58.3
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 1.6e-56 223.8 190 63.7
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.6e-56 223.8 132 81.1
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 2.0e-56 223.4 208 59.1
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 2.0e-56 223.4 187 63.6
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.7e-56 223.0 191 61.3
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 6.0e-56 221.9 177 65.5
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.3e-55 220.7 126 82.5
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 1.3e-55 220.7 177 65.5
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 1.3e-55 220.7 190 62.6
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 1.5e-54 217.2 219 53.0
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 9.5e-54 214.5 180 61.7
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 1.2e-53 214.2 180 62.2
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 2.8e-53 213.0 145 70.3
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 8.9e-52 208.0 137 72.3
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 3.4e-51 206.1 161 67.7
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 9.2e-41 171.4 129 62.0
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 1.0e-39 167.9 100 77.0
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.3e-39 166.8 93 77.4
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 2.5e-38 163.3 132 63.6
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 1.6e-37 160.6 186 44.6
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 8.4e-34 148.3 169 52.1
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 2.3e-31 140.2 186 46.8
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.2e-29 134.4 70 84.3
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 1.2e-29 134.4 134 53.0
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 6.2e-29 132.1 91 72.5
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 2.4e-28 130.2 121 58.7
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 5.2e-28 129.0 106 65.1
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 1.3e-26 124.4 176 46.6
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 2.9e-26 123.2 133 54.9
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 7.1e-25 118.6 81 75.3
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.3e-21 107.8 63 76.2
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.6e-21 107.5 56 85.7
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 3.1e-20 103.2 120 52.5


User provided reference genes

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