Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 8.2e-143 510.4 259 100.0
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 1.8e-57 226.9 266 49.6
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 1.2e-48 197.6 251 42.6
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 4.5e-48 195.7 258 42.6
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 7.7e-48 194.9 227 44.9
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 2.9e-47 193.0 227 44.5
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 2.9e-47 193.0 255 42.0
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 2.9e-47 193.0 256 41.4
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 6.5e-47 191.8 243 42.0
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 8.5e-47 191.4 203 46.3
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 8.5e-47 191.4 216 45.4
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 1.4e-46 190.7 255 41.2
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 1.4e-46 190.7 255 41.2
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 1.9e-46 190.3 255 41.6
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 2.5e-46 189.9 259 40.5
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 1.2e-45 187.6 266 42.1
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 1.2e-45 187.6 260 41.2
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 1.6e-45 187.2 202 45.5
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 4.7e-45 185.7 279 40.9
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 6.1e-45 185.3 202 44.6
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 7.9e-45 184.9 279 39.4
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 7.9e-45 184.9 204 44.6
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 1.4e-44 184.1 261 40.6
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 1.8e-44 183.7 264 40.2
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 2.3e-44 183.3 261 41.4
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 3.9e-44 182.6 253 40.7
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 6.7e-44 181.8 206 45.1
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 8.8e-44 181.4 202 45.0
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 8.8e-44 181.4 259 38.2
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 2.6e-43 179.9 260 38.1
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 2.6e-43 179.9 203 44.8
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 3.3e-43 179.5 200 43.5
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 5.7e-43 178.7 200 44.5
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 9.7e-43 177.9 247 39.7
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 1.3e-42 177.6 211 42.7
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 1.3e-42 177.6 256 38.7
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.7e-42 177.2 203 43.3
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 2.2e-42 176.8 201 44.3
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 2.8e-42 176.4 201 43.3
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 2.8e-42 176.4 229 40.6
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 4.8e-42 175.6 265 38.9
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 1.1e-41 174.5 203 44.3
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.8e-41 173.7 221 42.1
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 2.4e-41 173.3 201 42.8
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 4.1e-41 172.6 208 43.8
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 5.3e-41 172.2 264 39.8
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 5.3e-41 172.2 253 39.9
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 9.1e-41 171.4 203 42.4
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 9.1e-41 171.4 253 39.5
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 9.1e-41 171.4 233 40.3
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 1.2e-40 171.0 201 43.8
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 1.5e-40 170.6 224 41.5
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 1.5e-40 170.6 222 38.7
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.6e-40 169.9 203 41.9
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.5e-40 169.5 253 39.5
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 3.5e-40 169.5 216 40.3
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 5.9e-40 168.7 228 38.6
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 7.7e-40 168.3 202 42.1
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 7.7e-40 168.3 185 45.4
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 7.7e-40 168.3 278 36.3
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 2.9e-39 166.4 233 39.9
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.9e-39 166.4 255 38.0
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 3.8e-39 166.0 207 41.5
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 5.0e-39 165.6 259 39.0
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 6.5e-39 165.2 209 39.7
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 1.4e-38 164.1 200 41.5
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 1.9e-38 163.7 252 37.3
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 2.5e-38 163.3 126 56.3
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 2.5e-38 163.3 208 39.4
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 2.5e-38 163.3 262 36.3
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 3.2e-38 162.9 205 40.5
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 4.2e-38 162.5 237 38.0
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 5.5e-38 162.2 262 37.0
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 5.5e-38 162.2 259 38.6
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 7.2e-38 161.8 267 37.5
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 9.4e-38 161.4 216 38.9
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 2.1e-37 160.2 208 42.3
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 2.7e-37 159.8 266 35.3
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 4.7e-37 159.1 259 37.5
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 6.1e-37 158.7 201 40.3
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 6.1e-37 158.7 209 39.2
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 3.0e-36 156.4 169 44.4
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 3.0e-36 156.4 253 35.6
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 1.1e-35 154.5 226 35.4
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 1.1e-35 154.5 186 42.5
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 1.5e-35 154.1 186 42.5
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.5e-35 154.1 145 49.0
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 2.0e-35 153.7 183 43.2
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 5.7e-35 152.1 170 42.4
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 9.7e-35 151.4 145 49.7
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 1.3e-34 151.0 229 36.7
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 2.4e-33 146.7 238 35.7
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 3.1e-33 146.4 177 43.5
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 3.5e-32 142.9 173 38.7
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 7.7e-32 141.7 232 36.2
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 1.9e-30 137.1 231 36.4
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 1.9e-30 137.1 197 39.6
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 4.2e-30 136.0 181 38.7
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 1.0e-28 131.3 247 36.4
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 8.8e-28 128.3 142 42.3
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 1.8e-25 120.6 191 35.1
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 4.2e-22 109.4 203 31.5
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.1e-21 107.1 139 39.6
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 8.0e-21 105.1 127 48.0
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.0e-20 104.8 162 34.0
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 5.2e-20 102.4 209 37.8
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 2.0e-19 100.5 80 51.2
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 3.4e-19 99.8 80 52.5
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 4.4e-19 99.4 80 52.5
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 9.8e-19 98.2 172 40.7
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.2e-16 91.3 157 33.1
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 5.9e-16 89.0 82 46.3
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 1.7e-15 87.4 81 44.4
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 2.3e-15 87.0 215 29.3
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 9.5e-14 81.6 124 37.9
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 1.5e-11 74.3 143 34.3
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 3.4e-11 73.2 291 27.1
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.8e-09 67.4 214 27.1
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 5.4e-09 65.9 55 49.1
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 3.5e-08 63.2 196 28.6
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.3e-07 61.2 205 28.3
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 3.9e-07 59.7 156 29.5
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 4.3e-06 56.2 99 36.4


User provided reference genes

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