Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0037s0069 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.5e-75 285.0 163 100.0
Mapoly0087s0044 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.2e-19 100.5 168 44.0
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.1e-18 95.9 139 40.3
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 4.1e-15 85.5 140 38.6
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.2e-14 84.0 150 32.7
Mapoly0087s0045 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.7e-14 82.8 163 32.5
Mapoly0152s0035 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.3e-13 79.7 138 34.8
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 6.6e-13 78.2 139 36.7
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.5e-12 76.3 138 35.5
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 3.3e-12 75.9 150 33.3
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 9.5e-12 74.3 151 33.8
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 2.1e-11 73.2 157 30.6
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 4.7e-11 72.0 142 31.0
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 6.2e-11 71.6 147 30.6
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 6.2e-11 71.6 140 36.4
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 8.0e-11 71.2 137 32.1
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 3.1e-10 69.3 138 29.7
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 3.1e-10 69.3 143 32.2
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 6.8e-10 68.2 137 29.9
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 6.8e-10 68.2 145 29.7
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 8.9e-10 67.8 143 26.6
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 8.9e-10 67.8 137 32.8
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 8.9e-10 67.8 138 31.9
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 1.2e-09 67.4 140 29.3
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 1.2e-09 67.4 137 29.9
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 1.2e-09 67.4 137 30.7
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 1.5e-09 67.0 125 36.0
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 2.0e-09 66.6 137 31.4
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 2.6e-09 66.2 150 28.7
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 3.4e-09 65.9 137 29.9
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 3.4e-09 65.9 137 31.4
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 3.4e-09 65.9 155 29.0
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 4.4e-09 65.5 141 29.8
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 4.4e-09 65.5 144 30.6
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 4.4e-09 65.5 138 27.5
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 5.8e-09 65.1 155 28.4
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 5.8e-09 65.1 140 31.4
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 7.5e-09 64.7 139 30.9
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 7.5e-09 64.7 137 28.5
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 7.5e-09 64.7 138 30.4
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 9.8e-09 64.3 144 28.5
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 9.8e-09 64.3 141 29.1
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 1.3e-08 63.9 146 32.2
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 1.3e-08 63.9 137 31.4
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 1.7e-08 63.5 147 30.6
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 1.7e-08 63.5 137 29.9
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 1.7e-08 63.5 143 28.0
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 1.7e-08 63.5 165 29.7
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 1.7e-08 63.5 143 28.7
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.7e-08 63.5 141 30.5
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.2e-08 63.2 140 30.0
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.2e-08 63.2 145 29.7
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 2.2e-08 63.2 145 29.7
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 2.2e-08 63.2 149 30.2
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.9e-08 62.8 144 28.5
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 3.7e-08 62.4 146 31.5
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 3.7e-08 62.4 141 26.2
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 3.7e-08 62.4 141 29.8
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 3.7e-08 62.4 143 30.8
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 4.9e-08 62.0 141 31.2
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 4.9e-08 62.0 141 31.2
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 4.9e-08 62.0 141 29.8
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 6.4e-08 61.6 143 30.1
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 8.3e-08 61.2 141 30.5
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 8.3e-08 61.2 157 29.9
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 8.3e-08 61.2 151 28.5
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 1.1e-07 60.8 149 30.2
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 1.9e-07 60.1 143 30.1
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 1.9e-07 60.1 141 29.8
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 1.9e-07 60.1 141 29.8
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 1.9e-07 60.1 151 31.1
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 2.4e-07 59.7 140 27.9
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 2.4e-07 59.7 145 28.3
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 3.2e-07 59.3 130 27.7
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 4.1e-07 58.9 136 31.6
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 4.1e-07 58.9 148 31.8
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 4.1e-07 58.9 147 30.6
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 4.1e-07 58.9 141 28.4
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 5.4e-07 58.5 143 30.1
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 9.2e-07 57.8 141 25.5
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 9.2e-07 57.8 140 29.3
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 1.2e-06 57.4 129 28.7
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 1.2e-06 57.4 142 28.2
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 1.2e-06 57.4 139 30.2
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 2.1e-06 56.6 156 29.5
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 2.1e-06 56.6 141 29.8
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 2.1e-06 56.6 146 28.8
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 2.1e-06 56.6 150 26.7
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 2.1e-06 56.6 132 32.6
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 3.5e-06 55.8 137 31.4
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 4.6e-06 55.5 157 29.9
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 4.6e-06 55.5 138 28.3
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 6.0e-06 55.1 141 27.7
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 6.0e-06 55.1 150 28.0
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 7.8e-06 54.7 141 27.7


User provided reference genes

Program Settings